RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W YPD1Q07688 167 aa11.62□□□□□ -0.55
RPN10YHR200W IRC25Q07951 179 aa11.62□□□□□ -0.55
RPN10YHR200W UBI4P0CG63 381 aaKnown RBP11.61□□□□□ -0.55
RPN10YHR200W YMR31P19955 123 aa11.61□□□□□ -0.55
RPN10YHR200W SRY1P36007 326 aa11.61□□□□□ -0.55
RPN10YHR200W RTC3P38804 111 aaPredicted RBP11.61□□□□□ -0.55
RPN10YHR200W YGL117WP53133 265 aa11.61□□□□□ -0.55
RPN10YHR200W PEF1P53238 335 aa11.61□□□□□ -0.55
RPN10YHR200W WSC2P53832 503 aa11.61□□□□□ -0.55
RPN10YHR200W INN1P53901 409 aa11.61□□□□□ -0.55
RPN10YHR200W YDL009CQ12210 107 aa11.61□□□□□ -0.55
RPN10YHR200W AIM45Q12480 344 aaKnown RBP11.61□□□□□ -0.55
RPN10YHR200W YMR105W-AQ8TGS8 64 aa11.61□□□□□ -0.55
RPN10YHR200W ROX3P25046 220 aa11.6□□□□□ -0.55
RPN10YHR200W RPD3P32561 433 aa11.6□□□□□ -0.55
RPN10YHR200W GPI18P38211 433 aa11.6□□□□□ -0.55
RPN10YHR200W GAT2P40209 560 aa11.6□□□□□ -0.55
RPN10YHR200W AGX1P43567 385 aa11.6□□□□□ -0.55
RPN10YHR200W YHC3P47040 408 aa11.6□□□□□ -0.55
RPN10YHR200W BUL1P48524 976 aa11.6□□□□□ -0.55
RPN10YHR200W CWC25P53854 179 aaKnown RBP11.6□□□□□ -0.55
RPN10YHR200W BOL1Q3E793 110 aa11.6□□□□□ -0.55
RPN10YHR200W ERV1P27882 189 aa11.59□□□□□ -0.55
RPN10YHR200W IES6P32617 166 aa11.59□□□□□ -0.55
RPN10YHR200W REC104P33323 182 aa11.59□□□□□ -0.55
RPN10YHR200W SLM6P38343 150 aa11.59□□□□□ -0.55
RPN10YHR200W CTR2P38865 189 aa11.59□□□□□ -0.55
RPN10YHR200W YKL162CP36052 402 aa11.58□□□□□ -0.56
RPN10YHR200W PUS4P48567 403 aaKnown RBP11.58□□□□□ -0.56
RPN10YHR200W SNA4Q07549 140 aa11.58□□□□□ -0.56
RPN10YHR200W YCL048W-AQ2V2Q2 79 aa11.58□□□□□ -0.56
RPN10YHR200W YHR213W-AQ8TGT4 77 aa11.58□□□□□ -0.56
RPN10YHR200W VPS63O13549 108 aa11.57□□□□□ -0.56
RPN10YHR200W RPL9AP05738 191 aaKnown RBP11.57□□□□□ -0.56
RPN10YHR200W EMP24P32803 203 aaKnown RBP11.57□□□□□ -0.56
RPN10YHR200W RPL9BP51401 191 aaKnown RBP11.57□□□□□ -0.56
RPN10YHR200W YGL262WP53054 175 aa11.57□□□□□ -0.56
RPN10YHR200W ARR2Q06597 130 aa11.57□□□□□ -0.56
RPN10YHR200W YBL029C-AQ3E756 94 aa11.57□□□□□ -0.56
RPN10YHR200W SHG1P38337 142 aa11.56□□□□□ -0.56
RPN10YHR200W YEA4P40004 342 aa11.56□□□□□ -0.56
RPN10YHR200W TMC1Q08422 150 aaPredicted RBP11.56□□□□□ -0.56
RPN10YHR200W AGC1Q12482 902 aa11.56□□□□□ -0.56
RPN10YHR200W HBN1Q96VH4 193 aa11.56□□□□□ -0.56
RPN10YHR200W SPS18P32572 300 aa11.55□□□□□ -0.56
RPN10YHR200W MRPS17Q03246 237 aaPredicted RBP11.55□□□□□ -0.56
RPN10YHR200W ECM25P32525 599 aa11.54□□□□□ -0.56
RPN10YHR200W YJL118WP47022 219 aa11.54□□□□□ -0.56
RPN10YHR200W PHO23P50947 330 aa11.54□□□□□ -0.56
RPN10YHR200W ERG25P53045 309 aa11.54□□□□□ -0.56
RPN10YHR200W YGL114WP53134 725 aa11.54□□□□□ -0.56
RPN10YHR200W FSH2Q05015 223 aa11.54□□□□□ -0.56
RPN10YHR200W HOF1Q05080 669 aa11.54□□□□□ -0.56
RPN10YHR200W YOR029WQ12243 111 aa11.54□□□□□ -0.56
RPN10YHR200W ATG5Q12380 294 aa11.54□□□□□ -0.56
RPN10YHR200W YOS1Q3E834 85 aa11.54□□□□□ -0.56
RPN10YHR200W ZRC1P20107 442 aa11.53□□□□□ -0.56
RPN10YHR200W EMC5P40540 141 aa11.53□□□□□ -0.56
RPN10YHR200W NCA3P46955 337 aa11.53□□□□□ -0.56
RPN10YHR200W ABM1P47146 123 aa11.53□□□□□ -0.56
RPN10YHR200W EST3Q03096 181 aa11.53□□□□□ -0.56
RPN10YHR200W YMR082CQ04276 118 aa11.53□□□□□ -0.56
RPN10YHR200W RRP15Q06511 250 aaPredicted RBP11.53□□□□□ -0.56
RPN10YHR200W YPL264CQ08980 353 aa11.53□□□□□ -0.56
RPN10YHR200W CBT1P36038 271 aaPredicted RBP11.52□□□□□ -0.57
RPN10YHR200W CUE1P38428 203 aa11.52□□□□□ -0.57
RPN10YHR200W AIR1P40507 360 aaKnown RBP11.52□□□□□ -0.57
RPN10YHR200W PDR17P53844 350 aa11.52□□□□□ -0.57
RPN10YHR200W NOP16P40007 231 aaKnown RBP11.51□□□□□ -0.57
RPN10YHR200W RFC2P40348 353 aa11.51□□□□□ -0.57
RPN10YHR200W YIR020CP40575 100 aa11.51□□□□□ -0.57
RPN10YHR200W YNR066CP53752 436 aa11.51□□□□□ -0.57
RPN10YHR200W APJ1P53940 528 aa11.51□□□□□ -0.57
RPN10YHR200W YLR179CQ06252 201 aaKnown RBP11.51□□□□□ -0.57
RPN10YHR200W YBR255C-AQ3E776 120 aa11.51□□□□□ -0.57
RPN10YHR200W YBR292CP38357 123 aa11.5□□□□□ -0.57
RPN10YHR200W YIL012WP40551 113 aa11.5□□□□□ -0.57
RPN10YHR200W YGR050CP53231 118 aa11.5□□□□□ -0.57
RPN10YHR200W YCL001W-AP87012 153 aa11.5□□□□□ -0.57
RPN10YHR200W COA2Q3E823 68 aa11.5□□□□□ -0.57
RPN10YHR200W TRP4P07285 380 aaPredicted RBP11.49□□□□□ -0.57
RPN10YHR200W HEM13P11353 328 aaKnown RBP11.49□□□□□ -0.57
RPN10YHR200W BGL2P15703 313 aaKnown RBP11.49□□□□□ -0.57
RPN10YHR200W ARP3P47117 449 aaKnown RBP11.49□□□□□ -0.57
RPN10YHR200W CSI2Q08054 341 aa11.49□□□□□ -0.57
RPN10YHR200W ATP14Q12349 124 aa11.49□□□□□ -0.57
RPN10YHR200W GEP5Q12393 293 aa11.49□□□□□ -0.57
RPN10YHR200W YGL258W-AQ3E740 77 aa11.49□□□□□ -0.57
RPN10YHR200W YDR157WA0A023PZE8 133 aa11.48□□□□□ -0.57
RPN10YHR200W PMU1P36069 295 aa11.48□□□□□ -0.57
RPN10YHR200W PEX7P39108 375 aa11.48□□□□□ -0.57
RPN10YHR200W YIP1P53039 248 aa11.48□□□□□ -0.57
RPN10YHR200W ADH5P38113 351 aaKnown RBP11.47□□□□□ -0.57
RPN10YHR200W SSU72P53538 206 aaPredicted RBP11.47□□□□□ -0.57
RPN10YHR200W ISU1Q03020 165 aa11.47□□□□□ -0.57
RPN10YHR200W DCS1Q06151 350 aa11.47□□□□□ -0.57
RPN10YHR200W RDL1Q12305 139 aaKnown RBP11.47□□□□□ -0.57
RPN10YHR200W ACP1P32463 125 aa11.46□□□□□ -0.57
RPN10YHR200W YGR045CP53229 120 aa11.46□□□□□ -0.57
RPN10YHR200W ADH6Q04894 360 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms