RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W YGL088WP53151 121 aa4.45□□□□□ -1.7
SPC97YHR172W SDS23P53172 527 aa4.45□□□□□ -1.7
SPC97YHR172W YPL034WQ03083 165 aa4.45□□□□□ -1.7
SPC97YHR172W INP1Q03694 420 aa4.45□□□□□ -1.7
SPC97YHR172W VHS1Q03785 461 aa4.45□□□□□ -1.7
SPC97YHR172W YNL277W-AQ3E7Z0 62 aa4.45□□□□□ -1.7
SPC97YHR172W YBL008W-AQ3E821 79 aa4.45□□□□□ -1.7
SPC97YHR172W TIR1P10863 254 aa4.44□□□□□ -1.7
SPC97YHR172W CFD1P40558 293 aa4.44□□□□□ -1.7
SPC97YHR172W NHP10Q03435 203 aa4.44□□□□□ -1.7
SPC97YHR172W REV3P14284 1504 aa4.44□□□□□ -1.7
SPC97YHR172W Q0255P03881 472 aa4.44□□□□□ -1.7
SPC97YHR172W RPL15AP05748 204 aaKnown RBP4.44□□□□□ -1.7
SPC97YHR172W SEC59P20048 519 aa4.44□□□□□ -1.7
SPC97YHR172W YCR025CP25352 136 aa4.44□□□□□ -1.7
SPC97YHR172W MIX23P38162 196 aa4.44□□□□□ -1.7
SPC97YHR172W RPL15BP54780 204 aaPredicted RBP4.44□□□□□ -1.7
SPC97YHR172W YHC1Q05900 231 aaKnown RBP4.44□□□□□ -1.7
SPC97YHR172W YPL278CQ08990 100 aa4.44□□□□□ -1.7
SPC97YHR172W SPC3Q12133 184 aa4.44□□□□□ -1.7
SPC97YHR172W HHF1P02309 103 aaKnown RBP4.43□□□□□ -1.7
SPC97YHR172W VAR1P02381 398 aa4.43□□□□□ -1.7
SPC97YHR172W YCR022CP25620 114 aa4.43□□□□□ -1.7
SPC97YHR172W TRS20P38334 175 aa4.43□□□□□ -1.7
SPC97YHR172W TIF34P40217 347 aaKnown RBP4.43□□□□□ -1.7
SPC97YHR172W ALG9P53868 555 aaKnown RBP4.43□□□□□ -1.7
SPC97YHR172W VPS28Q02767 242 aa4.43□□□□□ -1.7
SPC97YHR172W FSH2Q05015 223 aa4.43□□□□□ -1.7
SPC97YHR172W MRS3P10566 314 aa4.43□□□□□ -1.7
SPC97YHR172W SRP21P32342 167 aa4.43□□□□□ -1.7
SPC97YHR172W RPF1P38805 295 aaKnown RBP4.43□□□□□ -1.7
SPC97YHR172W AST2P39945 430 aaKnown RBP4.43□□□□□ -1.7
SPC97YHR172W COS10P52924 374 aa4.43□□□□□ -1.7
SPC97YHR172W FMP48P53233 369 aa4.43□□□□□ -1.7
SPC97YHR172W YMR099CQ03161 297 aaKnown RBP4.43□□□□□ -1.7
SPC97YHR172W ADD37Q03233 198 aa4.43□□□□□ -1.7
SPC97YHR172W YER039C-AP0CD97 72 aa4.42□□□□□ -1.7
SPC97YHR172W IMP1P28627 190 aa4.42□□□□□ -1.7
SPC97YHR172W LDS1P31379 325 aa4.42□□□□□ -1.7
SPC97YHR172W PTC1P35182 281 aa4.42□□□□□ -1.7
SPC97YHR172W SMP1P38128 452 aa4.42□□□□□ -1.7
SPC97YHR172W LSM12P38828 187 aaKnown RBP4.42□□□□□ -1.7
SPC97YHR172W TIM17P39515 158 aa4.42□□□□□ -1.7
SPC97YHR172W TTI2P47168 421 aa4.42□□□□□ -1.7
SPC97YHR172W APJ1P53940 528 aa4.42□□□□□ -1.7
SPC97YHR172W RPN13O13563 156 aa4.41□□□□□ -1.7
SPC97YHR172W SPS2P08459 502 aa4.41□□□□□ -1.7
SPC97YHR172W SFT1P43682 97 aa4.41□□□□□ -1.7
SPC97YHR172W FIP1P45976 327 aa4.41□□□□□ -1.7
SPC97YHR172W SCS3P53012 380 aa4.41□□□□□ -1.7
SPC97YHR172W GPI2P46961 280 aa4.41□□□□□ -1.7
SPC97YHR172W PHO23P50947 330 aa4.41□□□□□ -1.7
SPC97YHR172W NSG2P53898 299 aa4.41□□□□□ -1.7
SPC97YHR172W YNL033WP53964 284 aa4.41□□□□□ -1.7
SPC97YHR172W YNL019CP53975 284 aa4.41□□□□□ -1.7
SPC97YHR172W LDB16P25587 256 aa4.4□□□□□ -1.7
SPC97YHR172W YKR073CP36153 106 aa4.4□□□□□ -1.7
SPC97YHR172W GGC1P38988 300 aa4.4□□□□□ -1.7
SPC97YHR172W PRE5P40302 234 aaKnown RBP4.4□□□□□ -1.7
SPC97YHR172W YJL213WP40896 331 aa4.4□□□□□ -1.7
SPC97YHR172W SNM1P40993 198 aa4.4□□□□□ -1.7
SPC97YHR172W SKI6P46948 246 aaPredicted RBP4.4□□□□□ -1.7
SPC97YHR172W TDA8Q6B2U8 126 aa4.4□□□□□ -1.7
SPC97YHR172W ATS1P31386 333 aa4.4□□□□□ -1.71
SPC97YHR172W PRM5P40476 318 aa4.4□□□□□ -1.71
SPC97YHR172W DAD3P69850 94 aa4.4□□□□□ -1.71
SPC97YHR172W GRH1Q04410 372 aaKnown RBP4.4□□□□□ -1.71
SPC97YHR172W YPS3Q12303 508 aa4.4□□□□□ -1.71
SPC97YHR172W RPS8AP0CX39 200 aaKnown RBP4.39□□□□□ -1.71
SPC97YHR172W RPS8BP0CX40 200 aaKnown RBP4.39□□□□□ -1.71
SPC97YHR172W ANB1P19211 157 aa4.39□□□□□ -1.71
SPC97YHR172W CHS7P38843 316 aa4.39□□□□□ -1.71
SPC97YHR172W LSM8P47093 109 aaKnown RBP4.39□□□□□ -1.71
SPC97YHR172W YPL162CQ12042 273 aa4.39□□□□□ -1.71
SPC97YHR172W DGK1Q12382 290 aa4.39□□□□□ -1.71
SPC97YHR172W YER181CP40097 107 aa4.39□□□□□ -1.71
SPC97YHR172W ATP5P09457 212 aa4.38□□□□□ -1.71
SPC97YHR172W TOD6P34219 525 aa4.38□□□□□ -1.71
SPC97YHR172W YBL081WP38180 368 aaKnown RBP4.38□□□□□ -1.71
SPC97YHR172W YHR140WP38842 239 aa4.38□□□□□ -1.71
SPC97YHR172W IRC22P40006 225 aa4.38□□□□□ -1.71
SPC97YHR172W LPP1Q04396 274 aa4.38□□□□□ -1.71
SPC97YHR172W NAT3Q06504 195 aa4.38□□□□□ -1.71
SPC97YHR172W YPR011CQ12251 326 aa4.38□□□□□ -1.71
SPC97YHR172W KTI11Q3E840 82 aa4.38□□□□□ -1.71
SPC97YHR172W RNP1P32385 249 aa4.38□□□□□ -1.71
SPC97YHR172W PHO89P38361 574 aa4.38□□□□□ -1.71
SPC97YHR172W YEL075CP39972 122 aa4.38□□□□□ -1.71
SPC97YHR172W YER189WP40104 122 aa4.38□□□□□ -1.71
SPC97YHR172W TDA4P47153 279 aa4.38□□□□□ -1.71
SPC97YHR172W GAS3Q03655 524 aa4.38□□□□□ -1.71
SPC97YHR172W YFR032C-BQ8TGU2 87 aa4.38□□□□□ -1.71
SPC97YHR172W HTL1Q9URQ5 78 aa4.38□□□□□ -1.71
SPC97YHR172W CCA1P21269 546 aa4.37□□□□□ -1.71
SPC97YHR172W SHB17P36136 271 aaKnown RBP4.37□□□□□ -1.71
SPC97YHR172W FMP46P36141 133 aaKnown RBP4.37□□□□□ -1.71
SPC97YHR172W YKR070WP36151 352 aaKnown RBP4.37□□□□□ -1.71
SPC97YHR172W YIL024CP40543 189 aa4.37□□□□□ -1.71
SPC97YHR172W YIL012WP40551 113 aa4.37□□□□□ -1.71
SPC97YHR172W YKR005CQ02203 525 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms