RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W COG5P53951 403 aa2□□□□□ -2.09
IMP3YHR148W YOL160WQ08321 113 aa2□□□□□ -2.09
IMP3YHR148W RPL13AQ12690 199 aaPredicted RBP2□□□□□ -2.09
IMP3YHR148W MET5P47169 1442 aa2□□□□□ -2.09
IMP3YHR148W CPA1P07258 411 aaKnown RBP1.99□□□□□ -2.09
IMP3YHR148W URA5P13298 226 aaKnown RBP1.99□□□□□ -2.09
IMP3YHR148W ANT1Q06497 328 aa1.99□□□□□ -2.09
IMP3YHR148W FPR1P20081 114 aaKnown RBP1.98□□□□□ -2.09
IMP3YHR148W POP3P53833 195 aaPredicted RBP1.98□□□□□ -2.09
IMP3YHR148W YDR274CP87283 123 aa1.98□□□□□ -2.09
IMP3YHR148W ATG40Q99325 256 aa1.98□□□□□ -2.09
IMP3YHR148W HTB1P02293 131 aaKnown RBP1.97□□□□□ -2.09
IMP3YHR148W HTB2P02294 131 aa1.97□□□□□ -2.09
IMP3YHR148W RPL25P04456 142 aaKnown RBP1.97□□□□□ -2.09
IMP3YHR148W RPB4P20433 221 aaPredicted RBP1.97□□□□□ -2.09
IMP3YHR148W MAG1P22134 296 aaKnown RBP1.97□□□□□ -2.09
IMP3YHR148W NTG1P31378 399 aa1.97□□□□□ -2.09
IMP3YHR148W TMA19P35691 167 aaKnown RBP1.97□□□□□ -2.09
IMP3YHR148W YBR285WP38354 144 aa1.97□□□□□ -2.09
IMP3YHR148W SAY1P53324 424 aa1.97□□□□□ -2.09
IMP3YHR148W GGA1Q06336 557 aa1.97□□□□□ -2.09
IMP3YHR148W YCL012CQ8J0M4 134 aa1.97□□□□□ -2.09
IMP3YHR148W YKT6P36015 200 aaKnown RBP1.96□□□□□ -2.1
IMP3YHR148W TRM5P38793 499 aa1.96□□□□□ -2.1
IMP3YHR148W ERJ5P43613 295 aaPredicted RBP1.96□□□□□ -2.1
IMP3YHR148W MZM1Q03429 123 aaPredicted RBP1.96□□□□□ -2.1
IMP3YHR148W SIR2P06700 562 aa1.95□□□□□ -2.1
IMP3YHR148W GPA2P10823 449 aa1.95□□□□□ -2.1
IMP3YHR148W SHE2P36068 246 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
IMP3YHR148W YBR209WP38311 105 aa1.95□□□□□ -2.1
IMP3YHR148W KNH1P50112 268 aa1.95□□□□□ -2.1
IMP3YHR148W YRA1Q12159 226 aaKnown RBP1.95□□□□□ -2.1
IMP3YHR148W MDM32Q12171 622 aa1.95□□□□□ -2.1
IMP3YHR148W YLR236CA0A023PZG4 107 aa1.94□□□□□ -2.1
IMP3YHR148W QCR8P08525 94 aa1.94□□□□□ -2.1
IMP3YHR148W RPL27AP0C2H6 136 aaKnown RBP1.94□□□□□ -2.1
IMP3YHR148W CBF1P17106 351 aa1.94□□□□□ -2.1
IMP3YHR148W TFC1P32367 649 aa1.94□□□□□ -2.1
IMP3YHR148W VMA22P38784 181 aa1.94□□□□□ -2.1
IMP3YHR148W HMF1P40037 129 aaKnown RBP1.94□□□□□ -2.1
IMP3YHR148W AIM25P47140 327 aa1.94□□□□□ -2.1
IMP3YHR148W CUS2P53830 285 aaPredicted RBP1.94□□□□□ -2.1
IMP3YHR148W IKI3Q06706 1349 aaKnown RBP1.93□□□□□ -2.1
IMP3YHR148W ERG10P41338 398 aaKnown RBP1.93□□□□□ -2.1
IMP3YHR148W MATALPHA2P0CY08 210 aa1.92□□□□□ -2.1
IMP3YHR148W HMLALPHA2P0CY09 210 aa1.92□□□□□ -2.1
IMP3YHR148W CKS1P20486 150 aaKnown RBP1.91□□□□□ -2.1
IMP3YHR148W KDX1P36005 433 aa1.91□□□□□ -2.1
IMP3YHR148W RFC4P40339 323 aaKnown RBP1.91□□□□□ -2.1
IMP3YHR148W MPC3P53311 146 aa1.91□□□□□ -2.1
IMP3YHR148W HNT1Q04344 158 aaKnown RBP1.91□□□□□ -2.1
IMP3YHR148W YMR226CQ05016 267 aaKnown RBP1.91□□□□□ -2.1
IMP3YHR148W RIO1Q12196 484 aaKnown RBP1.91□□□□□ -2.1
IMP3YHR148W OCH1P31755 480 aa1.9□□□□□ -2.11
IMP3YHR148W OPY1P38271 328 aa1.9□□□□□ -2.11
IMP3YHR148W NOP19P53317 196 aaPredicted RBP1.9□□□□□ -2.11
IMP3YHR148W ADF1Q2V2Q1 113 aa1.9□□□□□ -2.11
IMP3YHR148W ACC1Q00955 2233 aaKnown RBP1.9□□□□□ -2.11
IMP3YHR148W SEC11P15367 167 aa1.89□□□□□ -2.11
IMP3YHR148W MPA43P53583 542 aaPredicted RBP1.89□□□□□ -2.11
IMP3YHR148W ABP140Q08641 628 aaKnown RBP1.89□□□□□ -2.11
IMP3YHR148W RAD28Q12021 506 aa1.89□□□□□ -2.11
IMP3YHR148W QCR7P00128 127 aa1.88□□□□□ -2.11
IMP3YHR148W YER076CP40049 302 aa1.88□□□□□ -2.11
IMP3YHR148W GET1P53192 235 aa1.88□□□□□ -2.11
IMP3YHR148W CUE4Q04201 117 aaPredicted RBP1.88□□□□□ -2.11
IMP3YHR148W YDL180WQ12301 547 aa1.88□□□□□ -2.11
IMP3YHR148W JIP3O13555 125 aa1.87□□□□□ -2.11
IMP3YHR148W MRS1P07266 363 aa1.87□□□□□ -2.11
IMP3YHR148W SPO13P23624 291 aa1.87□□□□□ -2.11
IMP3YHR148W CNB1P25296 175 aa1.87□□□□□ -2.11
IMP3YHR148W MMS2P53152 137 aa1.87□□□□□ -2.11
IMP3YHR148W CWC21Q03375 135 aaKnown RBP1.87□□□□□ -2.11
IMP3YHR148W GET4Q12125 312 aa1.87□□□□□ -2.11
IMP3YHR148W ODC2Q99297 307 aa1.87□□□□□ -2.11
IMP3YHR148W POR1P04840 283 aaKnown RBP1.86□□□□□ -2.11
IMP3YHR148W ASF2P32448 525 aaPredicted RBP1.86□□□□□ -2.11
IMP3YHR148W TVP38P36164 337 aa1.86□□□□□ -2.11
IMP3YHR148W YER034WP40022 185 aaKnown RBP1.86□□□□□ -2.11
IMP3YHR148W GRX3Q03835 250 aa1.86□□□□□ -2.11
IMP3YHR148W MSB2P32334 1306 aa1.86□□□□□ -2.11
IMP3YHR148W MBF1O14467 151 aaKnown RBP1.85□□□□□ -2.11
IMP3YHR148W PAN3P36102 679 aaPredicted RBP1.85□□□□□ -2.11
IMP3YHR148W MRPS17Q03246 237 aaPredicted RBP1.85□□□□□ -2.11
IMP3YHR148W DGA1Q08650 418 aa1.85□□□□□ -2.11
IMP3YHR148W YCR090CP25654 182 aaKnown RBP1.84□□□□□ -2.11
IMP3YHR148W YEA4P40004 342 aa1.84□□□□□ -2.11
IMP3YHR148W ARP3P47117 449 aaKnown RBP1.84□□□□□ -2.11
IMP3YHR148W UBC7Q02159 165 aa1.84□□□□□ -2.11
IMP3YHR148W SER2P42941 309 aa1.83□□□□□ -2.12
IMP3YHR148W SKI6P46948 246 aaPredicted RBP1.83□□□□□ -2.12
IMP3YHR148W CGR1P53188 120 aa1.83□□□□□ -2.12
IMP3YHR148W YNL146C-AQ3E7Z1 64 aa1.83□□□□□ -2.12
IMP3YHR148W TVP23P38962 199 aa1.82□□□□□ -2.12
IMP3YHR148W YPL073CP40323 161 aa1.81□□□□□ -2.12
IMP3YHR148W YJR111CP47148 283 aaKnown RBP1.81□□□□□ -2.12
IMP3YHR148W FUS2Q05670 677 aa1.81□□□□□ -2.12
IMP3YHR148W RIO2P40160 425 aaKnown RBP1.8□□□□□ -2.12
IMP3YHR148W ARO8P53090 500 aaKnown RBP1.8□□□□□ -2.12
IMP3YHR148W YNL184CP53876 108 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms