RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C MRPL38P35996 138 aaPredicted RBP5.65□□□□□ -1.5
PUP2YGR253C UBP8P50102 471 aa5.65□□□□□ -1.5
PUP2YGR253C YMR181CQ03231 154 aa5.65□□□□□ -1.5
PUP2YGR253C TDA1Q03533 586 aa5.65□□□□□ -1.5
PUP2YGR253C GRX3Q03835 250 aa5.65□□□□□ -1.5
PUP2YGR253C CAB5Q03941 241 aa5.65□□□□□ -1.5
PUP2YGR253C SCW10Q04951 389 aa5.65□□□□□ -1.5
PUP2YGR253C PBP4Q07362 185 aaKnown RBP5.65□□□□□ -1.5
PUP2YGR253C RPL24BP24000 155 aaKnown RBP5.64□□□□□ -1.51
PUP2YGR253C ERG25P53045 309 aa5.64□□□□□ -1.51
PUP2YGR253C MRPL35Q06678 367 aa5.64□□□□□ -1.51
PUP2YGR253C INP53Q12271 1107 aa5.64□□□□□ -1.51
PUP2YGR253C MED4Q12343 284 aa5.64□□□□□ -1.51
PUP2YGR253C YJR112W-AQ3E743 109 aa5.64□□□□□ -1.51
PUP2YGR253C HUG1Q6Q5K6 68 aa5.64□□□□□ -1.51
PUP2YGR253C CDC23P16522 626 aa5.63□□□□□ -1.51
PUP2YGR253C DIT1P21623 536 aa5.63□□□□□ -1.51
PUP2YGR253C YPS1P32329 569 aa5.63□□□□□ -1.51
PUP2YGR253C MSS1P32559 526 aaPredicted RBP5.63□□□□□ -1.51
PUP2YGR253C RIB7P33312 244 aa5.63□□□□□ -1.51
PUP2YGR253C ECM33P38248 429 aaKnown RBP5.63□□□□□ -1.51
PUP2YGR253C GOS1P38736 223 aa5.63□□□□□ -1.51
PUP2YGR253C YJR012CP47087 207 aa5.63□□□□□ -1.51
PUP2YGR253C CRH1P53301 507 aa5.63□□□□□ -1.51
PUP2YGR253C YDR274CP87283 123 aa5.63□□□□□ -1.51
PUP2YGR253C RCF1Q03713 159 aa5.63□□□□□ -1.51
PUP2YGR253C LRS4Q04087 347 aaKnown RBP5.63□□□□□ -1.51
PUP2YGR253C TDA6Q06466 467 aa5.63□□□□□ -1.51
PUP2YGR253C YPL199CQ08954 240 aa5.63□□□□□ -1.51
PUP2YGR253C TRP4P07285 380 aaPredicted RBP5.62□□□□□ -1.51
PUP2YGR253C RNP1P32385 249 aa5.62□□□□□ -1.51
PUP2YGR253C MED8P38304 223 aa5.62□□□□□ -1.51
PUP2YGR253C YHR138CP38841 114 aaPredicted RBP5.62□□□□□ -1.51
PUP2YGR253C MPC2P38857 129 aa5.62□□□□□ -1.51
PUP2YGR253C RPA34P47006 233 aaPredicted RBP5.62□□□□□ -1.51
PUP2YGR253C YML018CQ03730 393 aa5.62□□□□□ -1.51
PUP2YGR253C BOL1Q3E793 110 aa5.62□□□□□ -1.51
PUP2YGR253C UBA3Q99344 299 aa5.62□□□□□ -1.51
PUP2YGR253C RPL3P14126 387 aaKnown RBP5.61□□□□□ -1.51
PUP2YGR253C NOP1P15646 327 aaKnown RBP5.61□□□□□ -1.51
PUP2YGR253C HOM6P31116 359 aaKnown RBP5.61□□□□□ -1.51
PUP2YGR253C ATG18P43601 500 aa5.61□□□□□ -1.51
PUP2YGR253C YLR031WQ07978 186 aa5.61□□□□□ -1.51
PUP2YGR253C HRD1Q08109 551 aa5.61□□□□□ -1.51
PUP2YGR253C IRC23Q08416 157 aa5.61□□□□□ -1.51
PUP2YGR253C RKI1Q12189 258 aa5.61□□□□□ -1.51
PUP2YGR253C TRR1P29509 319 aaKnown RBP5.6□□□□□ -1.51
PUP2YGR253C HTD2P38790 280 aaKnown RBP5.6□□□□□ -1.51
PUP2YGR253C POP2P39008 433 aa5.6□□□□□ -1.51
PUP2YGR253C YNL194CP40169 301 aa5.6□□□□□ -1.51
PUP2YGR253C CAT5P41735 233 aa5.6□□□□□ -1.51
PUP2YGR253C MSE1P48525 536 aa5.6□□□□□ -1.51
PUP2YGR253C RBL2P48606 106 aaKnown RBP5.6□□□□□ -1.51
PUP2YGR253C YGR219WP53307 113 aa5.6□□□□□ -1.51
PUP2YGR253C CPD1P53314 239 aa5.6□□□□□ -1.51
PUP2YGR253C MEH1Q02205 184 aa5.6□□□□□ -1.51
PUP2YGR253C KEI1Q06346 221 aa5.6□□□□□ -1.51
PUP2YGR253C HBN1Q96VH4 193 aa5.6□□□□□ -1.51
PUP2YGR253C VPS63O13549 108 aa5.59□□□□□ -1.51
PUP2YGR253C VMA8P32610 256 aaKnown RBP5.59□□□□□ -1.51
PUP2YGR253C SEC66P33754 206 aa5.59□□□□□ -1.51
PUP2YGR253C FMP23P38231 175 aa5.59□□□□□ -1.51
PUP2YGR253C YPT31P38555 223 aaKnown RBP5.59□□□□□ -1.51
PUP2YGR253C GVP36P40531 326 aaKnown RBP5.59□□□□□ -1.51
PUP2YGR253C LST8P41318 303 aa5.59□□□□□ -1.51
PUP2YGR253C YGR210CP42942 411 aa5.59□□□□□ -1.51
PUP2YGR253C HAM1P47119 197 aaKnown RBP5.59□□□□□ -1.51
PUP2YGR253C PEX10Q05568 337 aa5.59□□□□□ -1.51
PUP2YGR253C FMT1P32785 401 aa5.58□□□□□ -1.52
PUP2YGR253C ATP3P38077 311 aaKnown RBP5.58□□□□□ -1.52
PUP2YGR253C MIC12P38341 106 aa5.58□□□□□ -1.52
PUP2YGR253C BUL1P48524 976 aa5.58□□□□□ -1.52
PUP2YGR253C CAX4P53223 239 aa5.58□□□□□ -1.52
PUP2YGR253C ERV29P53337 310 aa5.58□□□□□ -1.52
PUP2YGR253C SUS1Q6WNK7 96 aa5.58□□□□□ -1.52
PUP2YGR253C PET494P07390 489 aaPredicted RBP5.57□□□□□ -1.52
PUP2YGR253C MIR1P23641 311 aaKnown RBP5.57□□□□□ -1.52
PUP2YGR253C MRPL27P36526 146 aaPredicted RBP5.57□□□□□ -1.52
PUP2YGR253C GPX2P38143 162 aa5.57□□□□□ -1.52
PUP2YGR253C IMD2P38697 523 aaKnown RBP5.57□□□□□ -1.52
PUP2YGR253C TMA20P89886 181 aaPredicted RBP5.57□□□□□ -1.52
PUP2YGR253C VBA1Q04301 562 aa5.57□□□□□ -1.52
PUP2YGR253C YOL029CQ08187 201 aa5.57□□□□□ -1.52
PUP2YGR253C YNG1Q08465 219 aa5.57□□□□□ -1.52
PUP2YGR253C PET20Q99373 253 aa5.57□□□□□ -1.52
PUP2YGR253C PDC2P32896 925 aa5.56□□□□□ -1.52
PUP2YGR253C NRG2P38082 220 aa5.56□□□□□ -1.52
PUP2YGR253C QDR3P38227 689 aa5.56□□□□□ -1.52
PUP2YGR253C NCE103P53615 221 aa5.56□□□□□ -1.52
PUP2YGR253C GIM3P53900 129 aa5.56□□□□□ -1.52
PUP2YGR253C MGR3Q04472 501 aa5.56□□□□□ -1.52
PUP2YGR253C TRI1Q05024 226 aa5.56□□□□□ -1.52
PUP2YGR253C PEX27Q08580 376 aa5.56□□□□□ -1.52
PUP2YGR253C YOR283WQ12040 230 aaKnown RBP5.56□□□□□ -1.52
PUP2YGR253C TAR1Q8TGM6 124 aa5.56□□□□□ -1.52
PUP2YGR253C SOD1P00445 154 aaKnown RBP5.55□□□□□ -1.52
PUP2YGR253C ALK2P32789 676 aaPredicted RBP5.55□□□□□ -1.52
PUP2YGR253C SRL3P36167 246 aa5.55□□□□□ -1.52
PUP2YGR253C YBR184WP38299 523 aa5.55□□□□□ -1.52
PUP2YGR253C YER137CP40083 148 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms