RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W SEN2P16658 377 aa6.94□□□□□ -1.3
CPD1YGR247W ECM33P38248 429 aaKnown RBP6.94□□□□□ -1.3
CPD1YGR247W GOS1P38736 223 aa6.94□□□□□ -1.3
CPD1YGR247W PDS1P40316 373 aaPredicted RBP6.94□□□□□ -1.3
CPD1YGR247W OTU1P43558 301 aa6.94□□□□□ -1.3
CPD1YGR247W YGR219WP53307 113 aa6.94□□□□□ -1.3
CPD1YGR247W YMR181CQ03231 154 aa6.94□□□□□ -1.3
CPD1YGR247W MED4Q12343 284 aa6.94□□□□□ -1.3
CPD1YGR247W YJR112W-AQ3E743 109 aa6.94□□□□□ -1.3
CPD1YGR247W TRP4P07285 380 aaPredicted RBP6.93□□□□□ -1.3
CPD1YGR247W YHR138CP38841 114 aaPredicted RBP6.93□□□□□ -1.3
CPD1YGR247W RPA34P47006 233 aaPredicted RBP6.93□□□□□ -1.3
CPD1YGR247W MRPL35Q06678 367 aa6.93□□□□□ -1.3
CPD1YGR247W HRD1Q08109 551 aa6.93□□□□□ -1.3
CPD1YGR247W INP53Q12271 1107 aa6.93□□□□□ -1.3
CPD1YGR247W HBN1Q96VH4 193 aa6.93□□□□□ -1.3
CPD1YGR247W VPS63O13549 108 aa6.92□□□□□ -1.3
CPD1YGR247W DIT1P21623 536 aa6.92□□□□□ -1.3
CPD1YGR247W YPS1P32329 569 aa6.92□□□□□ -1.3
CPD1YGR247W PDC2P32896 925 aa6.92□□□□□ -1.3
CPD1YGR247W POP2P39008 433 aa6.92□□□□□ -1.3
CPD1YGR247W YPL199CQ08954 240 aa6.92□□□□□ -1.3
CPD1YGR247W CDC23P16522 626 aa6.91□□□□□ -1.3
CPD1YGR247W SEC66P33754 206 aa6.91□□□□□ -1.3
CPD1YGR247W MIC12P38341 106 aa6.91□□□□□ -1.3
CPD1YGR247W ATG18P43601 500 aa6.91□□□□□ -1.3
CPD1YGR247W YNG1Q08465 219 aa6.91□□□□□ -1.3
CPD1YGR247W HUG1Q6Q5K6 68 aa6.91□□□□□ -1.3
CPD1YGR247W UBA3Q99344 299 aa6.91□□□□□ -1.3
CPD1YGR247W VMA8P32610 256 aaKnown RBP6.9□□□□□ -1.3
CPD1YGR247W YGR210CP42942 411 aa6.9□□□□□ -1.3
CPD1YGR247W CPD1P53314 239 aa6.9□□□□□ -1.3
CPD1YGR247W YML018CQ03730 393 aa6.9□□□□□ -1.3
CPD1YGR247W IRC23Q08416 157 aa6.9□□□□□ -1.3
CPD1YGR247W RPL3P14126 387 aaKnown RBP6.89□□□□□ -1.31
CPD1YGR247W NOP1P15646 327 aaKnown RBP6.89□□□□□ -1.31
CPD1YGR247W RPL24BP24000 155 aaKnown RBP6.89□□□□□ -1.31
CPD1YGR247W TRR1P29509 319 aaKnown RBP6.89□□□□□ -1.31
CPD1YGR247W FMP23P38231 175 aa6.89□□□□□ -1.31
CPD1YGR247W LST8P41318 303 aa6.89□□□□□ -1.31
CPD1YGR247W MSE1P48525 536 aa6.89□□□□□ -1.31
CPD1YGR247W MEH1Q02205 184 aa6.89□□□□□ -1.31
CPD1YGR247W VBA1Q04301 562 aa6.89□□□□□ -1.31
CPD1YGR247W PEX10Q05568 337 aa6.89□□□□□ -1.31
CPD1YGR247W HOM6P31116 359 aaKnown RBP6.88□□□□□ -1.31
CPD1YGR247W ALK2P32789 676 aaPredicted RBP6.88□□□□□ -1.31
CPD1YGR247W ATP3P38077 311 aaKnown RBP6.88□□□□□ -1.31
CPD1YGR247W TRI1Q05024 226 aa6.88□□□□□ -1.31
CPD1YGR247W KEI1Q06346 221 aa6.88□□□□□ -1.31
CPD1YGR247W PET494P07390 489 aaPredicted RBP6.87□□□□□ -1.31
CPD1YGR247W SRL3P36167 246 aa6.87□□□□□ -1.31
CPD1YGR247W YPT31P38555 223 aaKnown RBP6.87□□□□□ -1.31
CPD1YGR247W HTD2P38790 280 aaKnown RBP6.87□□□□□ -1.31
CPD1YGR247W YPI1P43587 155 aa6.87□□□□□ -1.31
CPD1YGR247W CAX4P53223 239 aa6.87□□□□□ -1.31
CPD1YGR247W NCE103P53615 221 aa6.87□□□□□ -1.31
CPD1YGR247W YLR031WQ07978 186 aa6.87□□□□□ -1.31
CPD1YGR247W MIR1P23641 311 aaKnown RBP6.86□□□□□ -1.31
CPD1YGR247W YCP4P25349 247 aaKnown RBP6.86□□□□□ -1.31
CPD1YGR247W FMT1P32785 401 aa6.86□□□□□ -1.31
CPD1YGR247W QDR3P38227 689 aa6.86□□□□□ -1.31
CPD1YGR247W AGX1P43567 385 aa6.86□□□□□ -1.31
CPD1YGR247W HAM1P47119 197 aaKnown RBP6.86□□□□□ -1.31
CPD1YGR247W BUL1P48524 976 aa6.86□□□□□ -1.31
CPD1YGR247W RBL2P48606 106 aaKnown RBP6.86□□□□□ -1.31
CPD1YGR247W TAR1Q8TGM6 124 aa6.86□□□□□ -1.31
CPD1YGR247W AIM20P40451 204 aa6.85□□□□□ -1.31
CPD1YGR247W CAT5P41735 233 aa6.85□□□□□ -1.31
CPD1YGR247W SSU72P53538 206 aaPredicted RBP6.85□□□□□ -1.31
CPD1YGR247W GIM3P53900 129 aa6.85□□□□□ -1.31
CPD1YGR247W ERV25P54837 211 aaKnown RBP6.85□□□□□ -1.31
CPD1YGR247W FSH2Q05015 223 aa6.85□□□□□ -1.31
CPD1YGR247W RAD28Q12021 506 aa6.85□□□□□ -1.31
CPD1YGR247W SUS1Q6WNK7 96 aa6.85□□□□□ -1.31
CPD1YGR247W PET20Q99373 253 aa6.85□□□□□ -1.31
CPD1YGR247W RNP1P32385 249 aa6.84□□□□□ -1.31
CPD1YGR247W MRPL27P36526 146 aaPredicted RBP6.84□□□□□ -1.31
CPD1YGR247W NRG2P38082 220 aa6.84□□□□□ -1.31
CPD1YGR247W IMD2P38697 523 aaKnown RBP6.84□□□□□ -1.31
CPD1YGR247W YER137CP40083 148 aaKnown RBP6.84□□□□□ -1.31
CPD1YGR247W RRG8Q06109 277 aa6.84□□□□□ -1.31
CPD1YGR247W ATG31Q12421 196 aa6.84□□□□□ -1.31
CPD1YGR247W SOD1P00445 154 aaKnown RBP6.83□□□□□ -1.32
CPD1YGR247W YBR184WP38299 523 aa6.83□□□□□ -1.32
CPD1YGR247W GVP36P40531 326 aaKnown RBP6.83□□□□□ -1.32
CPD1YGR247W IRC24P40580 263 aa6.83□□□□□ -1.32
CPD1YGR247W YFR035CP43608 114 aa6.83□□□□□ -1.32
CPD1YGR247W ERV29P53337 310 aa6.83□□□□□ -1.32
CPD1YGR247W SWT21P53873 357 aaPredicted RBP6.83□□□□□ -1.32
CPD1YGR247W SCP1Q08873 200 aa6.83□□□□□ -1.32
CPD1YGR247W YOR283WQ12040 230 aaKnown RBP6.83□□□□□ -1.32
CPD1YGR247W GPX2P38143 162 aa6.82□□□□□ -1.32
CPD1YGR247W ALG13P53178 202 aa6.82□□□□□ -1.32
CPD1YGR247W TMA20P89886 181 aaPredicted RBP6.82□□□□□ -1.32
CPD1YGR247W SYM1Q06563 197 aa6.82□□□□□ -1.32
CPD1YGR247W DOG2P38773 246 aa6.81□□□□□ -1.32
CPD1YGR247W DOG1P38774 246 aa6.81□□□□□ -1.32
CPD1YGR247W LSM12P38828 187 aaKnown RBP6.81□□□□□ -1.32
CPD1YGR247W YAR068WP39564 161 aa6.81□□□□□ -1.32
CPD1YGR247W ARP3P47117 449 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 125.4 ms