RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W PRE5P40302 234 aaKnown RBP5.21□□□□□ -1.58
SKN1YGR143W CAT5P41735 233 aa5.21□□□□□ -1.58
SKN1YGR143W YJR124CP47159 448 aa5.21□□□□□ -1.58
SKN1YGR143W ALG13P53178 202 aa5.21□□□□□ -1.58
SKN1YGR143W PIR3Q03180 325 aa5.21□□□□□ -1.58
SKN1YGR143W TFB5Q3E7C1 72 aaPredicted RBP5.21□□□□□ -1.58
SKN1YGR143W POP5P28005 173 aa5.2□□□□□ -1.58
SKN1YGR143W OAC1P32332 324 aa5.2□□□□□ -1.58
SKN1YGR143W MRPS9P38120 278 aa5.2□□□□□ -1.58
SKN1YGR143W RPS26AP39938 119 aaKnown RBP5.2□□□□□ -1.58
SKN1YGR143W RPS26BP39939 119 aaKnown RBP5.2□□□□□ -1.58
SKN1YGR143W SPC25P40014 221 aa5.2□□□□□ -1.58
SKN1YGR143W AYR1P40471 297 aa5.2□□□□□ -1.58
SKN1YGR143W AIM25P47140 327 aa5.2□□□□□ -1.58
SKN1YGR143W MSS11Q03825 758 aa5.2□□□□□ -1.58
SKN1YGR143W FMP27Q06179 2628 aa5.2□□□□□ -1.58
SKN1YGR143W HTA2P04912 132 aa5.2□□□□□ -1.58
SKN1YGR143W ATG12P38316 186 aa5.2□□□□□ -1.58
SKN1YGR143W SAS2P40963 338 aa5.2□□□□□ -1.58
SKN1YGR143W YJR115WP47152 169 aa5.2□□□□□ -1.58
SKN1YGR143W NUP53Q03790 475 aa5.2□□□□□ -1.58
SKN1YGR143W HRI1Q05905 244 aaKnown RBP5.2□□□□□ -1.58
SKN1YGR143W PLB3Q08108 686 aa5.2□□□□□ -1.58
SKN1YGR143W PRM3Q08931 133 aa5.2□□□□□ -1.58
SKN1YGR143W YLR049CQ12110 428 aa5.2□□□□□ -1.58
SKN1YGR143W RAS1P01119 309 aa5.19□□□□□ -1.58
SKN1YGR143W PAU19P0CE85 124 aa5.19□□□□□ -1.58
SKN1YGR143W PAU21P0CE86 164 aa5.19□□□□□ -1.58
SKN1YGR143W PAU22P0CE87 164 aa5.19□□□□□ -1.58
SKN1YGR143W CDC43P18898 376 aa5.19□□□□□ -1.58
SKN1YGR143W HYP2P23301 157 aaKnown RBP5.19□□□□□ -1.58
SKN1YGR143W PAU3P25610 124 aa5.19□□□□□ -1.58
SKN1YGR143W RTC2P38279 296 aa5.19□□□□□ -1.58
SKN1YGR143W NSA2P40078 261 aaKnown RBP5.19□□□□□ -1.58
SKN1YGR143W YNL198CP40166 100 aa5.19□□□□□ -1.58
SKN1YGR143W ERG26P53199 349 aaKnown RBP5.19□□□□□ -1.58
SKN1YGR143W DUG3P53871 357 aa5.19□□□□□ -1.58
SKN1YGR143W RHO5P53879 331 aaKnown RBP5.19□□□□□ -1.58
SKN1YGR143W YPR114WQ06107 315 aa5.19□□□□□ -1.58
SKN1YGR143W YDL157CQ12082 118 aa5.19□□□□□ -1.58
SKN1YGR143W ERV2Q12284 196 aa5.19□□□□□ -1.58
SKN1YGR143W YKL187CP34231 750 aa5.19□□□□□ -1.58
SKN1YGR143W UBC11P52492 156 aa5.19□□□□□ -1.58
SKN1YGR143W CTR3Q06686 241 aa5.19□□□□□ -1.58
SKN1YGR143W RPL7BQ12213 244 aaKnown RBP5.19□□□□□ -1.58
SKN1YGR143W ORT1Q12375 292 aa5.19□□□□□ -1.58
SKN1YGR143W HMRA1P0CY11 126 aa5.18□□□□□ -1.58
SKN1YGR143W YBR090CP38253 122 aa5.18□□□□□ -1.58
SKN1YGR143W VBA2P38358 474 aaKnown RBP5.18□□□□□ -1.58
SKN1YGR143W TRR2P38816 342 aa5.18□□□□□ -1.58
SKN1YGR143W MRPL49P40858 161 aaPredicted RBP5.18□□□□□ -1.58
SKN1YGR143W MEP2P41948 499 aa5.18□□□□□ -1.58
SKN1YGR143W XPT1P47165 209 aa5.18□□□□□ -1.58
SKN1YGR143W BNS1P50084 137 aa5.18□□□□□ -1.58
SKN1YGR143W RMD9P53140 646 aaKnown RBP5.18□□□□□ -1.58
SKN1YGR143W PRM8P53174 237 aa5.18□□□□□ -1.58
SKN1YGR143W BUD9P53226 547 aa5.18□□□□□ -1.58
SKN1YGR143W VHT1P53241 593 aa5.18□□□□□ -1.58
SKN1YGR143W CDC14Q00684 551 aa5.18□□□□□ -1.58
SKN1YGR143W YMR320WQ04897 101 aa5.18□□□□□ -1.58
SKN1YGR143W YLR118CQ12354 227 aa5.18□□□□□ -1.58
SKN1YGR143W BEM2P39960 2167 aaKnown RBP5.18□□□□□ -1.58
SKN1YGR143W SAM35P14693 329 aa5.18□□□□□ -1.58
SKN1YGR143W DCW1P36091 449 aa5.18□□□□□ -1.58
SKN1YGR143W IRC22P40006 225 aa5.18□□□□□ -1.58
SKN1YGR143W SDP1P40479 209 aa5.18□□□□□ -1.58
SKN1YGR143W SNO3P43544 222 aa5.18□□□□□ -1.58
SKN1YGR143W CIN2P46670 268 aa5.18□□□□□ -1.58
SKN1YGR143W ATG27P46989 271 aa5.18□□□□□ -1.58
SKN1YGR143W HSV2P50079 448 aaPredicted RBP5.18□□□□□ -1.58
SKN1YGR143W MTL1P53214 551 aa5.18□□□□□ -1.58
SKN1YGR143W YNR040WP53736 256 aa5.18□□□□□ -1.58
SKN1YGR143W SNO2P53823 222 aa5.18□□□□□ -1.58
SKN1YGR143W MHF2Q3E829 80 aa5.18□□□□□ -1.58
SKN1YGR143W YPL229WQ99395 206 aa5.18□□□□□ -1.58
SKN1YGR143W RPL40AP0CH08 128 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W RPL40BP0CH09 128 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W YMR31P19955 123 aa5.17□□□□□ -1.58
SKN1YGR143W YSR3P23501 404 aa5.17□□□□□ -1.58
SKN1YGR143W YIH1P25637 258 aa5.17□□□□□ -1.58
SKN1YGR143W GAR1P28007 205 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W ZRT1P32804 376 aa5.17□□□□□ -1.58
SKN1YGR143W SLM6P38343 150 aa5.17□□□□□ -1.58
SKN1YGR143W RPS20P38701 121 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W HTD2P38790 280 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W TTI2P47168 421 aa5.17□□□□□ -1.58
SKN1YGR143W WSC2P53832 503 aa5.17□□□□□ -1.58
SKN1YGR143W EFM6P53970 246 aa5.17□□□□□ -1.58
SKN1YGR143W GAS3Q03655 524 aa5.17□□□□□ -1.58
SKN1YGR143W SNO4Q04902 237 aa5.17□□□□□ -1.58
SKN1YGR143W HSP32Q08992 237 aa5.17□□□□□ -1.58
SKN1YGR143W RPL12AP0CX53 165 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W RPL12BP0CX54 165 aa5.17□□□□□ -1.58
SKN1YGR143W YKL107WP34251 309 aa5.17□□□□□ -1.58
SKN1YGR143W ASC1P38011 319 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W MIX23P38162 196 aa5.17□□□□□ -1.58
SKN1YGR143W ECM33P38248 429 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W YFR020WP43600 232 aa5.17□□□□□ -1.58
SKN1YGR143W SMM1P53720 384 aaKnown RBP5.17□□□□□ -1.58
SKN1YGR143W PDR17P53844 350 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms