RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W BXI1P48558 297 aa2.33□□□□□ -2.04
PRP18YGR006W TOS8P53147 276 aa2.33□□□□□ -2.04
PRP18YGR006W DYN3Q04949 312 aa2.33□□□□□ -2.04
PRP18YGR006W YPD1Q07688 167 aa2.33□□□□□ -2.04
PRP18YGR006W YOL024WQ08172 172 aa2.33□□□□□ -2.04
PRP18YGR006W AKR2Q12013 749 aa2.33□□□□□ -2.04
PRP18YGR006W PEX11Q12462 236 aa2.33□□□□□ -2.04
PRP18YGR006W MRS1P07266 363 aa2.32□□□□□ -2.04
PRP18YGR006W YHR032W-AP0C5N6 59 aa2.32□□□□□ -2.04
PRP18YGR006W NHP6AP11632 93 aaKnown RBP2.32□□□□□ -2.04
PRP18YGR006W GCN3P14741 305 aa2.32□□□□□ -2.04
PRP18YGR006W IDP1P21954 428 aaKnown RBP2.32□□□□□ -2.04
PRP18YGR006W MGT1P26188 188 aa2.32□□□□□ -2.04
PRP18YGR006W BUB2P26448 306 aaPredicted RBP2.32□□□□□ -2.04
PRP18YGR006W YOR062CP36025 268 aa2.32□□□□□ -2.04
PRP18YGR006W CAT5P41735 233 aa2.32□□□□□ -2.04
PRP18YGR006W MOG1P47123 218 aa2.32□□□□□ -2.04
PRP18YGR006W MAK3Q03503 176 aa2.32□□□□□ -2.04
PRP18YGR006W YML108WQ03759 105 aa2.32□□□□□ -2.04
PRP18YGR006W HNT1Q04344 158 aaKnown RBP2.32□□□□□ -2.04
PRP18YGR006W RDI1Q12434 202 aa2.32□□□□□ -2.04
PRP18YGR006W YOR020W-AQ3E824 90 aa2.32□□□□□ -2.04
PRP18YGR006W CMD1P06787 147 aaKnown RBP2.31□□□□□ -2.04
PRP18YGR006W GRX2P17695 143 aaKnown RBP2.31□□□□□ -2.04
PRP18YGR006W YCR023CP25351 611 aa2.31□□□□□ -2.04
PRP18YGR006W ARO7P32178 256 aa2.31□□□□□ -2.04
PRP18YGR006W RPF1P38805 295 aaKnown RBP2.31□□□□□ -2.04
PRP18YGR006W NVJ1P38881 321 aa2.31□□□□□ -2.04
PRP18YGR006W YER137CP40083 148 aaKnown RBP2.31□□□□□ -2.04
PRP18YGR006W PDS1P40316 373 aaPredicted RBP2.31□□□□□ -2.04
PRP18YGR006W AIM25P47140 327 aa2.31□□□□□ -2.04
PRP18YGR006W MPA43P53583 542 aaPredicted RBP2.31□□□□□ -2.04
PRP18YGR006W DYN2Q02647 92 aa2.31□□□□□ -2.04
PRP18YGR006W YLR361C-AQ3E795 98 aa2.31□□□□□ -2.04
PRP18YGR006W TOP2P06786 1428 aaKnown RBP2.31□□□□□ -2.04
PRP18YGR006W CPR5P35176 225 aa2.3□□□□□ -2.04
PRP18YGR006W APS1P35181 156 aa2.3□□□□□ -2.04
PRP18YGR006W YAR068WP39564 161 aa2.3□□□□□ -2.04
PRP18YGR006W GLE2P40066 365 aa2.3□□□□□ -2.04
PRP18YGR006W LSM4P40070 187 aaKnown RBP2.3□□□□□ -2.04
PRP18YGR006W PHB1P40961 287 aa2.3□□□□□ -2.04
PRP18YGR006W SMD3P43321 101 aaKnown RBP2.3□□□□□ -2.04
PRP18YGR006W APS3P47064 194 aa2.3□□□□□ -2.04
PRP18YGR006W CCC1P47818 322 aa2.3□□□□□ -2.04
PRP18YGR006W ATG39Q06159 398 aa2.3□□□□□ -2.04
PRP18YGR006W MSA1Q08471 629 aa2.3□□□□□ -2.04
PRP18YGR006W MDM32Q12171 622 aa2.3□□□□□ -2.04
PRP18YGR006W YPL229WQ99395 206 aa2.3□□□□□ -2.04
PRP18YGR006W SNT2P53127 1403 aa2.3□□□□□ -2.04
PRP18YGR006W YIL177CP40434 1758 aa2.3□□□□□ -2.04
PRP18YGR006W YJL225CP40889 1758 aa2.3□□□□□ -2.04
PRP18YGR006W CDC8P00572 216 aa2.29□□□□□ -2.04
PRP18YGR006W HSP30P25619 332 aa2.29□□□□□ -2.04
PRP18YGR006W VMA11P32842 164 aa2.29□□□□□ -2.04
PRP18YGR006W IPI1P38803 334 aaPredicted RBP2.29□□□□□ -2.04
PRP18YGR006W PEX17P40155 199 aa2.29□□□□□ -2.04
PRP18YGR006W RPA43P46669 326 aa2.29□□□□□ -2.04
PRP18YGR006W DAN1P47178 298 aa2.29□□□□□ -2.04
PRP18YGR006W YNL184CP53876 108 aa2.29□□□□□ -2.04
PRP18YGR006W SWP1Q02795 286 aa2.29□□□□□ -2.04
PRP18YGR006W NIP7Q08962 181 aaKnown RBP2.29□□□□□ -2.04
PRP18YGR006W EFG1Q3E705 233 aaKnown RBP2.29□□□□□ -2.04
PRP18YGR006W RPL9AP05738 191 aaKnown RBP2.28□□□□□ -2.04
PRP18YGR006W FCY2P17064 533 aa2.28□□□□□ -2.04
PRP18YGR006W SEC14P24280 304 aaKnown RBP2.28□□□□□ -2.04
PRP18YGR006W PTM1P32857 523 aa2.28□□□□□ -2.04
PRP18YGR006W SFK1P35735 353 aa2.28□□□□□ -2.04
PRP18YGR006W NRG2P38082 220 aa2.28□□□□□ -2.04
PRP18YGR006W YBR285WP38354 144 aa2.28□□□□□ -2.04
PRP18YGR006W PRS3P38689 320 aaKnown RBP2.28□□□□□ -2.04
PRP18YGR006W DOG2P38773 246 aa2.28□□□□□ -2.04
PRP18YGR006W DOG1P38774 246 aa2.28□□□□□ -2.04
PRP18YGR006W RMD6P39975 231 aa2.28□□□□□ -2.04
PRP18YGR006W RPL9BP51401 191 aaKnown RBP2.28□□□□□ -2.04
PRP18YGR006W UBC12P52491 188 aa2.28□□□□□ -2.04
PRP18YGR006W PRM8P53174 237 aa2.28□□□□□ -2.04
PRP18YGR006W LSM7P53905 115 aaKnown RBP2.28□□□□□ -2.04
PRP18YGR006W DAD3P69850 94 aa2.28□□□□□ -2.04
PRP18YGR006W HSK3P69852 69 aa2.28□□□□□ -2.04
PRP18YGR006W TMA20P89886 181 aaPredicted RBP2.28□□□□□ -2.04
PRP18YGR006W PET191Q02772 108 aa2.28□□□□□ -2.04
PRP18YGR006W YDR476CQ03362 224 aa2.28□□□□□ -2.04
PRP18YGR006W PKR1Q03880 122 aaKnown RBP2.28□□□□□ -2.04
PRP18YGR006W YOL160WQ08321 113 aa2.28□□□□□ -2.04
PRP18YGR006W Q0144Q9ZZW2 109 aa2.28□□□□□ -2.04
PRP18YGR006W SIR2P06700 562 aa2.27□□□□□ -2.05
PRP18YGR006W SEC4P07560 215 aaKnown RBP2.27□□□□□ -2.05
PRP18YGR006W MRPS28P21771 286 aa2.27□□□□□ -2.05
PRP18YGR006W ATG22P25568 528 aa2.27□□□□□ -2.05
PRP18YGR006W PEX34P25584 144 aa2.27□□□□□ -2.05
PRP18YGR006W YCR090CP25654 182 aaKnown RBP2.27□□□□□ -2.05
PRP18YGR006W SUA7P29055 345 aaPredicted RBP2.27□□□□□ -2.05
PRP18YGR006W UTP11P34247 250 aaPredicted RBP2.27□□□□□ -2.05
PRP18YGR006W YBR063CP38083 404 aa2.27□□□□□ -2.05
PRP18YGR006W CTR2P38865 189 aa2.27□□□□□ -2.05
PRP18YGR006W YJR015WP47090 510 aa2.27□□□□□ -2.05
PRP18YGR006W DID2P69771 204 aa2.27□□□□□ -2.05
PRP18YGR006W YDR249CQ03787 373 aa2.27□□□□□ -2.05
PRP18YGR006W RAV2Q03956 351 aa2.27□□□□□ -2.05
PRP18YGR006W YPR202WQ08993 238 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms