RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C PCL1P24867 279 aa0.93□□□□□ -2.26
SEC3YER008C ARO7P32178 256 aa0.93□□□□□ -2.26
SEC3YER008C ALK2P32789 676 aaPredicted RBP0.93□□□□□ -2.26
SEC3YER008C TIP20P33891 701 aa0.93□□□□□ -2.26
SEC3YER008C UTP30P36144 274 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C RRG9P40156 214 aa0.93□□□□□ -2.26
SEC3YER008C BOR1P53838 576 aa0.93□□□□□ -2.26
SEC3YER008C ACT1P60010 375 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C HAL1Q01766 294 aa0.93□□□□□ -2.26
SEC3YER008C AIM34Q03673 198 aa0.93□□□□□ -2.26
SEC3YER008C YDL114WQ07530 308 aa0.93□□□□□ -2.26
SEC3YER008C YDL144CQ07589 356 aa0.93□□□□□ -2.26
SEC3YER008C SPT15P13393 240 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C EPT1P22140 391 aa0.93□□□□□ -2.26
SEC3YER008C SEC22P22214 214 aa0.93□□□□□ -2.26
SEC3YER008C CAF4P36130 643 aa0.93□□□□□ -2.26
SEC3YER008C SHE1P38200 338 aa0.93□□□□□ -2.26
SEC3YER008C GGC1P38988 300 aa0.93□□□□□ -2.26
SEC3YER008C IRC18P47056 224 aa0.93□□□□□ -2.26
SEC3YER008C YOL014WQ08110 124 aa0.93□□□□□ -2.26
SEC3YER008C FDH1Q08911 376 aa0.93□□□□□ -2.26
SEC3YER008C NIP7Q08962 181 aaKnown RBP0.93□□□□□ -2.26
SEC3YER008C TIR4Q12218 487 aaPredicted RBP0.93□□□□□ -2.26
SEC3YER008C PRR2Q12310 699 aa0.93□□□□□ -2.26
SEC3YER008C HRT3Q12347 344 aa0.93□□□□□ -2.26
SEC3YER008C AAT2P23542 418 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C PRE7P23724 241 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C SRP102P36057 244 aaPredicted RBP0.92□□□□□ -2.26
SEC3YER008C MRPL39P36533 70 aa0.92□□□□□ -2.26
SEC3YER008C FES1P38260 290 aa0.92□□□□□ -2.26
SEC3YER008C YHL044WP38727 235 aa0.92□□□□□ -2.26
SEC3YER008C TRR2P38816 342 aa0.92□□□□□ -2.26
SEC3YER008C TMA22P47089 198 aaPredicted RBP0.92□□□□□ -2.26
SEC3YER008C RNH201P53942 307 aa0.92□□□□□ -2.26
SEC3YER008C SPG3Q04398 127 aaPredicted RBP0.92□□□□□ -2.26
SEC3YER008C SFM1Q12314 213 aa0.92□□□□□ -2.26
SEC3YER008C SPT3P06844 337 aa0.92□□□□□ -2.26
SEC3YER008C PET9P18239 318 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C APS1P35181 156 aa0.92□□□□□ -2.26
SEC3YER008C PHO89P38361 574 aa0.92□□□□□ -2.26
SEC3YER008C DOG2P38773 246 aa0.92□□□□□ -2.26
SEC3YER008C NVJ1P38881 321 aa0.92□□□□□ -2.26
SEC3YER008C GIM4P40005 111 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C RRT13P40042 185 aa0.92□□□□□ -2.26
SEC3YER008C YGR201CP42936 225 aa0.92□□□□□ -2.26
SEC3YER008C COQ5P49017 307 aa0.92□□□□□ -2.26
SEC3YER008C YGL204CP53089 101 aa0.92□□□□□ -2.26
SEC3YER008C YGL118CP53132 145 aa0.92□□□□□ -2.26
SEC3YER008C MRH4P53166 561 aa0.92□□□□□ -2.26
SEC3YER008C ORM1P53224 222 aa0.92□□□□□ -2.26
SEC3YER008C AAH1P53909 347 aa0.92□□□□□ -2.26
SEC3YER008C OSH6Q02201 448 aa0.92□□□□□ -2.26
SEC3YER008C BBP1Q12365 385 aa0.92□□□□□ -2.26
SEC3YER008C SUR2P38992 349 aa0.92□□□□□ -2.26
SEC3YER008C PRE6P40303 254 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C IGD1P43598 195 aa0.92□□□□□ -2.26
SEC3YER008C LSM1P47017 172 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C YJR015WP47090 510 aa0.92□□□□□ -2.26
SEC3YER008C ARP3P47117 449 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C INM2Q05533 292 aa0.92□□□□□ -2.26
SEC3YER008C TMC1Q08422 150 aaPredicted RBP0.92□□□□□ -2.26
SEC3YER008C YPL264CQ08980 353 aa0.92□□□□□ -2.26
SEC3YER008C YPL162CQ12042 273 aa0.92□□□□□ -2.26
SEC3YER008C YPL245WQ12179 454 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C ATO3Q12359 275 aa0.92□□□□□ -2.26
SEC3YER008C RDI1Q12434 202 aa0.92□□□□□ -2.26
SEC3YER008C YLR361C-AQ3E795 98 aa0.92□□□□□ -2.26
SEC3YER008C PDR18P53756 1333 aa0.92□□□□□ -2.26
SEC3YER008C IPP1P00817 287 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C ARO2P28777 376 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C SHG1P38337 142 aa0.92□□□□□ -2.26
SEC3YER008C PIR5P46999 287 aa0.92□□□□□ -2.26
SEC3YER008C YJR141WP47172 347 aaPredicted RBP0.92□□□□□ -2.26
SEC3YER008C ARO8P53090 500 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C RRG7Q08774 242 aaPredicted RBP0.92□□□□□ -2.26
SEC3YER008C YOR342CQ12182 319 aa0.92□□□□□ -2.26
SEC3YER008C ERV2Q12284 196 aa0.92□□□□□ -2.26
SEC3YER008C LSO2Q3E772 92 aaKnown RBP0.92□□□□□ -2.26
SEC3YER008C COX4P04037 155 aa0.91□□□□□ -2.26
SEC3YER008C SEC4P07560 215 aaKnown RBP0.91□□□□□ -2.26
SEC3YER008C FCY2P17064 533 aa0.91□□□□□ -2.26
SEC3YER008C CKS1P20486 150 aaKnown RBP0.91□□□□□ -2.26
SEC3YER008C UPS2P35200 230 aa0.91□□□□□ -2.26
SEC3YER008C GPI18P38211 433 aa0.91□□□□□ -2.26
SEC3YER008C PDS1P40316 373 aaPredicted RBP0.91□□□□□ -2.26
SEC3YER008C COG7P53195 279 aa0.91□□□□□ -2.26
SEC3YER008C YGR050CP53231 118 aa0.91□□□□□ -2.26
SEC3YER008C GOT1Q03554 138 aa0.91□□□□□ -2.26
SEC3YER008C YDR249CQ03787 373 aa0.91□□□□□ -2.26
SEC3YER008C YHR032W-AP0C5N6 59 aa0.91□□□□□ -2.26
SEC3YER008C PEX34P25584 144 aa0.91□□□□□ -2.26
SEC3YER008C LDS1P31379 325 aa0.91□□□□□ -2.26
SEC3YER008C SPT14P32363 452 aa0.91□□□□□ -2.26
SEC3YER008C VPS51P36116 164 aa0.91□□□□□ -2.26
SEC3YER008C IRC22P40006 225 aa0.91□□□□□ -2.26
SEC3YER008C RSM25P40496 264 aa0.91□□□□□ -2.26
SEC3YER008C PFS2P42841 465 aaKnown RBP0.91□□□□□ -2.26
SEC3YER008C YPI1P43587 155 aa0.91□□□□□ -2.26
SEC3YER008C YJL027CP47063 138 aaPredicted RBP0.91□□□□□ -2.26
SEC3YER008C CAX4P53223 239 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms