RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W SPC25P40014 221 aa2.09□□□□□ -2.07
SNX41YDR425W YER188WP40103 239 aa2.09□□□□□ -2.07
SNX41YDR425W MMF1P40185 145 aaKnown RBP2.09□□□□□ -2.07
SNX41YDR425W CIN2P46670 268 aa2.09□□□□□ -2.07
SNX41YDR425W ABM1P47146 123 aa2.09□□□□□ -2.07
SNX41YDR425W BAT2P47176 376 aaKnown RBP2.09□□□□□ -2.07
SNX41YDR425W RMD9P53140 646 aaKnown RBP2.09□□□□□ -2.07
SNX41YDR425W YGR250CP53316 781 aaKnown RBP2.09□□□□□ -2.07
SNX41YDR425W YMR181CQ03231 154 aa2.09□□□□□ -2.07
SNX41YDR425W TMA23Q03525 211 aa2.09□□□□□ -2.07
SNX41YDR425W GMC1Q04399 608 aa2.09□□□□□ -2.07
SNX41YDR425W TVP18Q04767 167 aa2.09□□□□□ -2.07
SNX41YDR425W TMC1Q08422 150 aaPredicted RBP2.09□□□□□ -2.07
SNX41YDR425W NAT5Q08689 176 aa2.09□□□□□ -2.07
SNX41YDR425W UBR1P19812 1950 aa2.09□□□□□ -2.07
SNX41YDR425W FKS1P38631 1876 aaKnown RBP2.09□□□□□ -2.07
SNX41YDR425W COX9P07255 59 aa2.09□□□□□ -2.08
SNX41YDR425W PAU19P0CE85 124 aa2.09□□□□□ -2.08
SNX41YDR425W PAU21P0CE86 164 aa2.09□□□□□ -2.08
SNX41YDR425W PAU22P0CE87 164 aa2.09□□□□□ -2.08
SNX41YDR425W PAU3P25610 124 aa2.09□□□□□ -2.08
SNX41YDR425W MIG1P27705 504 aa2.09□□□□□ -2.08
SNX41YDR425W ALK2P32789 676 aaPredicted RBP2.09□□□□□ -2.08
SNX41YDR425W GSP1P32835 219 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W GSP2P32836 220 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W SSH1P38353 490 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W INM1P38710 295 aa2.09□□□□□ -2.08
SNX41YDR425W SUR2P38992 349 aa2.09□□□□□ -2.08
SNX41YDR425W DLS1P40366 167 aa2.09□□□□□ -2.08
SNX41YDR425W LYS12P40495 371 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W TOS2P50078 622 aa2.09□□□□□ -2.08
SNX41YDR425W NIF3P53081 288 aa2.09□□□□□ -2.08
SNX41YDR425W YGL101WP53144 215 aa2.09□□□□□ -2.08
SNX41YDR425W YDR366CP87287 132 aa2.09□□□□□ -2.08
SNX41YDR425W HRI1Q05905 244 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W YLR179CQ06252 201 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W YOR015WQ12169 119 aa2.09□□□□□ -2.08
SNX41YDR425W TPO4Q12256 659 aa2.09□□□□□ -2.08
SNX41YDR425W YLR118CQ12354 227 aa2.09□□□□□ -2.08
SNX41YDR425W AIM45Q12480 344 aaKnown RBP2.09□□□□□ -2.08
SNX41YDR425W COX5BP00425 151 aa2.08□□□□□ -2.08
SNX41YDR425W SOD1P00445 154 aaKnown RBP2.08□□□□□ -2.08
SNX41YDR425W BGL2P15703 313 aaKnown RBP2.08□□□□□ -2.08
SNX41YDR425W UPS2P35200 230 aa2.08□□□□□ -2.08
SNX41YDR425W YKL075CP36083 450 aa2.08□□□□□ -2.08
SNX41YDR425W MRPL27P36526 146 aaPredicted RBP2.08□□□□□ -2.08
SNX41YDR425W MRPS9P38120 278 aa2.08□□□□□ -2.08
SNX41YDR425W POP8P38208 133 aa2.08□□□□□ -2.08
SNX41YDR425W TRS20P38334 175 aa2.08□□□□□ -2.08
SNX41YDR425W TIM17P39515 158 aa2.08□□□□□ -2.08
SNX41YDR425W NSA2P40078 261 aaKnown RBP2.08□□□□□ -2.08
SNX41YDR425W ICE2P40499 491 aa2.08□□□□□ -2.08
SNX41YDR425W NAS2P40555 220 aa2.08□□□□□ -2.08
SNX41YDR425W GPI14P47088 403 aaKnown RBP2.08□□□□□ -2.08
SNX41YDR425W YGL262WP53054 175 aa2.08□□□□□ -2.08
SNX41YDR425W PCP1P53259 346 aa2.08□□□□□ -2.08
SNX41YDR425W YNR048WP53740 393 aa2.08□□□□□ -2.08
SNX41YDR425W GIM3P53900 129 aa2.08□□□□□ -2.08
SNX41YDR425W VPS28Q02767 242 aa2.08□□□□□ -2.08
SNX41YDR425W UPS3Q04006 179 aa2.08□□□□□ -2.08
SNX41YDR425W YLR456WQ06199 204 aa2.08□□□□□ -2.08
SNX41YDR425W PIN3Q06449 215 aa2.08□□□□□ -2.08
SNX41YDR425W TAZ1Q06510 381 aa2.08□□□□□ -2.08
SNX41YDR425W TIM18Q08749 192 aa2.08□□□□□ -2.08
SNX41YDR425W YPL257WQ08974 193 aa2.08□□□□□ -2.08
SNX41YDR425W AHC1Q12433 566 aa2.08□□□□□ -2.08
SNX41YDR425W HKR1P41809 1802 aa2.08□□□□□ -2.08
SNX41YDR425W COX2P00410 251 aa2.07□□□□□ -2.08
SNX41YDR425W ILV5P06168 395 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W DDI2P0CH63 225 aa2.07□□□□□ -2.08
SNX41YDR425W DDI3P0CH64 225 aa2.07□□□□□ -2.08
SNX41YDR425W DPM1P14020 267 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W MRS4P23500 304 aa2.07□□□□□ -2.08
SNX41YDR425W LSB5P25369 354 aa2.07□□□□□ -2.08
SNX41YDR425W STP22P25604 385 aa2.07□□□□□ -2.08
SNX41YDR425W SUA7P29055 345 aaPredicted RBP2.07□□□□□ -2.08
SNX41YDR425W PEX4P29340 183 aa2.07□□□□□ -2.08
SNX41YDR425W FMT1P32785 401 aa2.07□□□□□ -2.08
SNX41YDR425W RPL14AP36105 138 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W CUE1P38428 203 aa2.07□□□□□ -2.08
SNX41YDR425W RPL14BP38754 138 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W BDH1P39714 382 aa2.07□□□□□ -2.08
SNX41YDR425W IRC22P40006 225 aa2.07□□□□□ -2.08
SNX41YDR425W PHS1P40857 217 aa2.07□□□□□ -2.08
SNX41YDR425W PAU5P43575 122 aa2.07□□□□□ -2.08
SNX41YDR425W SFH5P47008 294 aa2.07□□□□□ -2.08
SNX41YDR425W YJR011CP47086 261 aaPredicted RBP2.07□□□□□ -2.08
SNX41YDR425W CCC1P47818 322 aa2.07□□□□□ -2.08
SNX41YDR425W YGR117CP53270 476 aa2.07□□□□□ -2.08
SNX41YDR425W CTF19Q02732 369 aa2.07□□□□□ -2.08
SNX41YDR425W INP1Q03694 420 aa2.07□□□□□ -2.08
SNX41YDR425W CGI121Q03705 181 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W SYM1Q06563 197 aa2.07□□□□□ -2.08
SNX41YDR425W SRL2Q12020 392 aa2.07□□□□□ -2.08
SNX41YDR425W IZH2Q12442 317 aa2.07□□□□□ -2.08
SNX41YDR425W ERP4Q12450 207 aa2.07□□□□□ -2.08
SNX41YDR425W PEX11Q12462 236 aa2.07□□□□□ -2.08
SNX41YDR425W RAX2Q12465 1220 aa2.07□□□□□ -2.08
SNX41YDR425W PAR32Q12515 295 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W SLH1P53327 1967 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 164 ms