RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W UPS1Q05776 175 aa5.16□□□□□ -1.58
RPT3YDR394W PRP11Q07350 266 aaPredicted RBP5.16□□□□□ -1.58
RPT3YDR394W PAM18Q07914 168 aa5.16□□□□□ -1.58
RPT3YDR394W CSF1Q12150 2958 aa5.16□□□□□ -1.58
RPT3YDR394W FRE8Q12209 686 aa5.16□□□□□ -1.58
RPT3YDR394W YPR071WQ12346 211 aa5.16□□□□□ -1.58
RPT3YDR394W AIM45Q12480 344 aaKnown RBP5.16□□□□□ -1.58
RPT3YDR394W ATG40Q99325 256 aa5.16□□□□□ -1.58
RPT3YDR394W GDH1P07262 454 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W RIP1P08067 215 aa5.15□□□□□ -1.59
RPT3YDR394W MSI1P13712 422 aa5.15□□□□□ -1.59
RPT3YDR394W SWD3P38123 315 aa5.15□□□□□ -1.59
RPT3YDR394W YER084WP40057 128 aa5.15□□□□□ -1.59
RPT3YDR394W HXT14P42833 540 aa5.15□□□□□ -1.59
RPT3YDR394W EGT2P42835 1041 aa5.15□□□□□ -1.59
RPT3YDR394W MOG1P47123 218 aa5.15□□□□□ -1.59
RPT3YDR394W YIP5P53108 310 aa5.15□□□□□ -1.59
RPT3YDR394W MSO1P53604 210 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W YMR279CQ03263 540 aa5.15□□□□□ -1.59
RPT3YDR394W DPB4Q04603 196 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W RAF1Q06891 181 aa5.15□□□□□ -1.59
RPT3YDR394W MPD1Q12404 318 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W MAK32P23060 363 aa5.14□□□□□ -1.59
RPT3YDR394W ERV1P27882 189 aa5.14□□□□□ -1.59
RPT3YDR394W IMP1P28627 190 aa5.14□□□□□ -1.59
RPT3YDR394W REC104P33323 182 aa5.14□□□□□ -1.59
RPT3YDR394W MRPS5P33759 307 aa5.14□□□□□ -1.59
RPT3YDR394W RIB5P38145 238 aa5.14□□□□□ -1.59
RPT3YDR394W MTC6P38849 526 aa5.14□□□□□ -1.59
RPT3YDR394W PEF1P53238 335 aa5.14□□□□□ -1.59
RPT3YDR394W YPL067CQ02754 198 aa5.14□□□□□ -1.59
RPT3YDR394W YDC1Q02896 317 aa5.14□□□□□ -1.59
RPT3YDR394W ADD37Q03233 198 aa5.14□□□□□ -1.59
RPT3YDR394W LRS4Q04087 347 aaKnown RBP5.14□□□□□ -1.59
RPT3YDR394W TSA2Q04120 196 aa5.14□□□□□ -1.59
RPT3YDR394W YLR179CQ06252 201 aaKnown RBP5.14□□□□□ -1.59
RPT3YDR394W YOR292CQ08743 309 aa5.14□□□□□ -1.59
RPT3YDR394W RRS1Q08746 203 aaKnown RBP5.14□□□□□ -1.59
RPT3YDR394W FIT3Q08907 204 aa5.14□□□□□ -1.59
RPT3YDR394W NCE102Q12207 173 aaRIP-Chip data5.14□□□□□ -1.59not detected
RPT3YDR394W SNU23Q12368 194 aaPredicted RBP5.14□□□□□ -1.59
RPT3YDR394W AGC1Q12482 902 aa5.14□□□□□ -1.59
RPT3YDR394W COA2Q3E823 68 aa5.14□□□□□ -1.59
RPT3YDR394W HUG1Q6Q5K6 68 aa5.14□□□□□ -1.59
RPT3YDR394W YMR262WP38430 313 aa5.13□□□□□ -1.59
RPT3YDR394W PIG2P40187 538 aa5.13□□□□□ -1.59
RPT3YDR394W RFC2P40348 353 aa5.13□□□□□ -1.59
RPT3YDR394W FLX1P40464 311 aa5.13□□□□□ -1.59
RPT3YDR394W GTT1P40582 234 aa5.13□□□□□ -1.59
RPT3YDR394W TAF4P50105 388 aa5.13□□□□□ -1.59
RPT3YDR394W SIP18P50263 79 aa5.13□□□□□ -1.59
RPT3YDR394W TIM21P53220 239 aa5.13□□□□□ -1.59
RPT3YDR394W SNO1Q03144 224 aa5.13□□□□□ -1.59
RPT3YDR394W GMC1Q04399 608 aa5.13□□□□□ -1.59
RPT3YDR394W HOF1Q05080 669 aa5.13□□□□□ -1.59
RPT3YDR394W HRD1Q08109 551 aa5.13□□□□□ -1.59
RPT3YDR394W YOL024WQ08172 172 aa5.13□□□□□ -1.59
RPT3YDR394W YPL264CQ08980 353 aa5.13□□□□□ -1.59
RPT3YDR394W DGK1Q12382 290 aa5.13□□□□□ -1.59
RPT3YDR394W RPL35AP0CX84 120 aaKnown RBP5.12□□□□□ -1.59
RPT3YDR394W RPL35BP0CX85 120 aaKnown RBP5.12□□□□□ -1.59
RPT3YDR394W ATG15P25641 520 aa5.12□□□□□ -1.59
RPT3YDR394W CLB6P32943 380 aa5.12□□□□□ -1.59
RPT3YDR394W MRPL4P36517 319 aa5.12□□□□□ -1.59
RPT3YDR394W ATG8P38182 117 aaRIP-Chip data5.12□□□□□ -1.59not detected
RPT3YDR394W MOH1P38191 138 aa5.12□□□□□ -1.59
RPT3YDR394W SMD3P43321 101 aaKnown RBP5.12□□□□□ -1.59
RPT3YDR394W PDR17P53844 350 aa5.12□□□□□ -1.59
RPT3YDR394W RIM9Q04734 239 aa5.12□□□□□ -1.59
RPT3YDR394W YMR253CQ04835 414 aa5.12□□□□□ -1.59
RPT3YDR394W PRR2Q12310 699 aa5.12□□□□□ -1.59
RPT3YDR394W BRR2P32639 2163 aaKnown RBP5.11□□□□□ -1.59
RPT3YDR394W HEM4P06174 275 aa5.11□□□□□ -1.59
RPT3YDR394W ADH3P07246 375 aaKnown RBP5.11□□□□□ -1.59
RPT3YDR394W TRP4P07285 380 aaPredicted RBP5.11□□□□□ -1.59
RPT3YDR394W SEC59P20048 519 aa5.11□□□□□ -1.59
RPT3YDR394W MRS4P23500 304 aa5.11□□□□□ -1.59
RPT3YDR394W ACP1P32463 125 aa5.11□□□□□ -1.59
RPT3YDR394W RPN14P53196 417 aa5.11□□□□□ -1.59
RPT3YDR394W LIP2Q06005 328 aa5.11□□□□□ -1.59
RPT3YDR394W YOR015WQ12169 119 aa5.11□□□□□ -1.59
RPT3YDR394W YPR145C-AQ2V2P0 78 aa5.11□□□□□ -1.59
RPT3YDR394W YOR192C-CQ3E736 78 aa5.11□□□□□ -1.59
RPT3YDR394W CDC7P06243 507 aa5.1□□□□□ -1.59
RPT3YDR394W APA2P22108 325 aa5.1□□□□□ -1.59
RPT3YDR394W YOX1P34161 385 aa5.1□□□□□ -1.59
RPT3YDR394W UPS2P35200 230 aa5.1□□□□□ -1.59
RPT3YDR394W TRS20P38334 175 aa5.1□□□□□ -1.59
RPT3YDR394W YEL057CP39983 233 aa5.1□□□□□ -1.59
RPT3YDR394W PHS1P40857 217 aa5.1□□□□□ -1.59
RPT3YDR394W VMA21P41806 77 aa5.1□□□□□ -1.59
RPT3YDR394W YGL262WP53054 175 aa5.1□□□□□ -1.59
RPT3YDR394W YGR026WP53217 278 aa5.1□□□□□ -1.59
RPT3YDR394W SKO1Q02100 647 aa5.1□□□□□ -1.59
RPT3YDR394W FSH2Q05015 223 aa5.1□□□□□ -1.59
RPT3YDR394W DXO1Q06349 442 aa5.1□□□□□ -1.59
RPT3YDR394W YDL242WQ07746 117 aa5.1□□□□□ -1.59
RPT3YDR394W YOL118CQ08259 102 aa5.1□□□□□ -1.59
RPT3YDR394W FCY22Q12119 530 aa5.1□□□□□ -1.59
RPT3YDR394W YBR255C-AQ3E776 120 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms