RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W DXO1Q06349 442 aa4.28□□□□□ -1.72
TRS23YDR246W SRL1Q08673 210 aa4.28□□□□□ -1.72
TRS23YDR246W SNU23Q12368 194 aaPredicted RBP4.28□□□□□ -1.72
TRS23YDR246W CDC28P00546 298 aaKnown RBP4.27□□□□□ -1.73
TRS23YDR246W IPP1P00817 287 aaKnown RBP4.27□□□□□ -1.73
TRS23YDR246W RPL42AP0CX27 106 aaKnown RBP4.27□□□□□ -1.73
TRS23YDR246W RPL42BP0CX28 106 aaKnown RBP4.27□□□□□ -1.73
TRS23YDR246W RPL30P14120 105 aaKnown RBP4.27□□□□□ -1.73
TRS23YDR246W PEX4P29340 183 aa4.27□□□□□ -1.73
TRS23YDR246W OCH1P31755 480 aa4.27□□□□□ -1.73
TRS23YDR246W GLC7P32598 312 aaKnown RBP4.27□□□□□ -1.73
TRS23YDR246W REC114P32841 428 aa4.27□□□□□ -1.73
TRS23YDR246W MNS1P32906 549 aa4.27□□□□□ -1.73
TRS23YDR246W PGD1P40356 397 aa4.27□□□□□ -1.73
TRS23YDR246W POG1P40473 351 aa4.27□□□□□ -1.73
TRS23YDR246W NSE4P43124 402 aa4.27□□□□□ -1.73
TRS23YDR246W SSN8P47821 323 aa4.27□□□□□ -1.73
TRS23YDR246W ADD37Q03233 198 aa4.27□□□□□ -1.73
TRS23YDR246W AKR2Q12013 749 aa4.27□□□□□ -1.73
TRS23YDR246W YPR145C-AQ2V2P0 78 aa4.27□□□□□ -1.73
TRS23YDR246W COX19Q3E731 98 aa4.27□□□□□ -1.73
TRS23YDR246W YER145C-AA0A023PYF4 145 aa4.26□□□□□ -1.73
TRS23YDR246W TDH3P00359 332 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
TRS23YDR246W RPS16AP0CX51 143 aaKnown RBP4.26□□□□□ -1.73
TRS23YDR246W RPS16BP0CX52 143 aaKnown RBP4.26□□□□□ -1.73
TRS23YDR246W CKA1P15790 372 aa4.26□□□□□ -1.73
TRS23YDR246W ERG8P24521 451 aa4.26□□□□□ -1.73
TRS23YDR246W ERG2P32352 222 aa4.26□□□□□ -1.73
TRS23YDR246W SPC25P40014 221 aa4.26□□□□□ -1.73
TRS23YDR246W RPL13BP40212 199 aaKnown RBP4.26□□□□□ -1.73
TRS23YDR246W IKS1P47042 667 aa4.26□□□□□ -1.73
TRS23YDR246W YIF1P53845 314 aaKnown RBP4.26□□□□□ -1.73
TRS23YDR246W MRPS17Q03246 237 aaPredicted RBP4.26□□□□□ -1.73
TRS23YDR246W YMR279CQ03263 540 aa4.26□□□□□ -1.73
TRS23YDR246W YDR387CQ04162 555 aa4.26□□□□□ -1.73
TRS23YDR246W YMR253CQ04835 414 aa4.26□□□□□ -1.73
TRS23YDR246W HRI1Q05905 244 aaKnown RBP4.26□□□□□ -1.73
TRS23YDR246W RPL13AQ12690 199 aaPredicted RBP4.26□□□□□ -1.73
TRS23YDR246W YLR365WQ7LIF2 110 aa4.26□□□□□ -1.73
TRS23YDR246W APA2P22108 325 aa4.25□□□□□ -1.73
TRS23YDR246W YCR043CP25361 127 aa4.25□□□□□ -1.73
TRS23YDR246W RPB7P34087 171 aa4.25□□□□□ -1.73
TRS23YDR246W ATG8P38182 117 aaRIP-Chip data4.25□□□□□ -1.73not detected
TRS23YDR246W SHG1P38337 142 aa4.25□□□□□ -1.73
TRS23YDR246W POP2P39008 433 aa4.25□□□□□ -1.73
TRS23YDR246W YEA4P40004 342 aa4.25□□□□□ -1.73
TRS23YDR246W GTT1P40582 234 aa4.25□□□□□ -1.73
TRS23YDR246W ECO1P43605 281 aa4.25□□□□□ -1.73
TRS23YDR246W RPA34P47006 233 aaPredicted RBP4.25□□□□□ -1.73
TRS23YDR246W YJR012CP47087 207 aa4.25□□□□□ -1.73
TRS23YDR246W MOG1P47123 218 aa4.25□□□□□ -1.73
TRS23YDR246W IZH1Q03419 316 aa4.25□□□□□ -1.73
TRS23YDR246W TSA2Q04120 196 aa4.25□□□□□ -1.73
TRS23YDR246W YMR082CQ04276 118 aa4.25□□□□□ -1.73
TRS23YDR246W FIT1Q04433 528 aa4.25□□□□□ -1.73
TRS23YDR246W YDR286CQ05530 114 aa4.25□□□□□ -1.73
TRS23YDR246W MDM30Q05930 598 aa4.25□□□□□ -1.73
TRS23YDR246W ZEO1Q08245 113 aa4.25□□□□□ -1.73
TRS23YDR246W YOR186WQ08560 144 aa4.25□□□□□ -1.73
TRS23YDR246W YLR112WQ12130 139 aa4.25□□□□□ -1.73
TRS23YDR246W YOR015WQ12169 119 aa4.25□□□□□ -1.73
TRS23YDR246W USB1Q12208 290 aaKnown RBP4.25□□□□□ -1.73
TRS23YDR246W COX17Q12287 69 aa4.25□□□□□ -1.73
TRS23YDR246W COA2Q3E823 68 aa4.25□□□□□ -1.73
TRS23YDR246W GDH1P07262 454 aaKnown RBP4.24□□□□□ -1.73
TRS23YDR246W YFR010W-AP0C5N0 62 aa4.24□□□□□ -1.73
TRS23YDR246W DAL82P21705 255 aa4.24□□□□□ -1.73
TRS23YDR246W DEG1P31115 442 aaKnown RBP4.24□□□□□ -1.73
TRS23YDR246W RIB5P38145 238 aa4.24□□□□□ -1.73
TRS23YDR246W ERV15P38312 142 aa4.24□□□□□ -1.73
TRS23YDR246W YIL169CP40442 995 aa4.24□□□□□ -1.73
TRS23YDR246W VMA21P41806 77 aa4.24□□□□□ -1.73
TRS23YDR246W SLX9P53251 210 aaPredicted RBP4.24□□□□□ -1.73
TRS23YDR246W MSO1P53604 210 aaKnown RBP4.24□□□□□ -1.73
TRS23YDR246W TMA23Q03525 211 aa4.24□□□□□ -1.73
TRS23YDR246W YDR415CQ04033 374 aaPredicted RBP4.24□□□□□ -1.73
TRS23YDR246W GMC1Q04399 608 aa4.24□□□□□ -1.73
TRS23YDR246W POS5Q06892 414 aa4.24□□□□□ -1.73
TRS23YDR246W YPD1Q07688 167 aa4.24□□□□□ -1.73
TRS23YDR246W RFU1Q08003 200 aa4.24□□□□□ -1.73
TRS23YDR246W NCE102Q12207 173 aaRIP-Chip data4.24□□□□□ -1.73not detected
TRS23YDR246W FRE8Q12209 686 aa4.24□□□□□ -1.73
TRS23YDR246W YPR108W-AQ3E7B3 70 aa4.24□□□□□ -1.73
TRS23YDR246W HUG1Q6Q5K6 68 aa4.24□□□□□ -1.73
TRS23YDR246W YOR032W-AQ8TGS1 66 aa4.24□□□□□ -1.73
TRS23YDR246W RPL25P04456 142 aaKnown RBP4.23□□□□□ -1.73
TRS23YDR246W RPB3P16370 318 aaKnown RBP4.23□□□□□ -1.73
TRS23YDR246W SAG1P20840 650 aa4.23□□□□□ -1.73
TRS23YDR246W YCR025CP25352 136 aa4.23□□□□□ -1.73
TRS23YDR246W YCR101CP25607 182 aa4.23□□□□□ -1.73
TRS23YDR246W CLB6P32943 380 aa4.23□□□□□ -1.73
TRS23YDR246W MCH2P36032 473 aa4.23□□□□□ -1.73
TRS23YDR246W SWD3P38123 315 aa4.23□□□□□ -1.73
TRS23YDR246W YBR096WP38256 230 aa4.23□□□□□ -1.73
TRS23YDR246W SLM6P38343 150 aa4.23□□□□□ -1.73
TRS23YDR246W CCS1P40202 249 aaKnown RBP4.23□□□□□ -1.73
TRS23YDR246W TIM21P53220 239 aa4.23□□□□□ -1.73
TRS23YDR246W MEH1Q02205 184 aa4.23□□□□□ -1.73
TRS23YDR246W YDR209CQ03480 137 aa4.23□□□□□ -1.73
TRS23YDR246W YOL118CQ08259 102 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms