RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	YML122C	Q03207	126 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	ASM4	Q05166	528 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	KEI1	Q06346	221 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	NDE2	Q07500	545 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	YFH1	Q07540	174 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	YLR031W	Q07978	186 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	YPR108W-A	Q3E7B3	70 aa		5.08	□□□□□ -1.6
CDC1	YDR182W	YHR212W-A	P0CX91	67 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	PET54	P10834	293 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	CKA1	P15790	372 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	SPS18	P32572	300 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	YKL069W	P36088	180 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	BMT5	P40493	336 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	IMD3	P50095	523 aa	Known RBP	5.07	□□□□□ -1.6
CDC1	YDR182W	YML018C	Q03730	393 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	IES3	Q12345	250 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	HUG1	Q6Q5K6	68 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	GAL1	P04385	528 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	RPL9A	P05738	191 aa	Known RBP	5.07	□□□□□ -1.6
CDC1	YDR182W	RPL11A	P0C0W9	174 aa	Known RBP	5.07	□□□□□ -1.6
CDC1	YDR182W	CDC23	P16522	626 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	ROX3	P25046	220 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	RIB7	P33312	244 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	YUH1	P35127	236 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	YKR045C	P36138	183 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	FMP23	P38231	175 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	FCY21	P40039	528 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	GPP2	P40106	250 aa	Known RBP	5.07	□□□□□ -1.6
CDC1	YDR182W	PRM5	P40476	318 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	YJL213W	P40896	331 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	COX18	P53239	316 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	MRPL22	P53881	309 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	YOR283W	Q12040	230 aa	Known RBP	5.07	□□□□□ -1.6
CDC1	YDR182W	MED4	Q12343	284 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	RPL11B	Q3E757	174 aa	Predicted RBP	5.07	□□□□□ -1.6
CDC1	YDR182W	UBA3	Q99344	299 aa		5.07	□□□□□ -1.6
CDC1	YDR182W	MSS1	P32559	526 aa	Predicted RBP	5.06	□□□□□ -1.6
CDC1	YDR182W	YHR122W	P38829	231 aa		5.06	□□□□□ -1.6
CDC1	YDR182W	JLP2	P40206	208 aa		5.06	□□□□□ -1.6
CDC1	YDR182W	UBP8	P50102	471 aa		5.06	□□□□□ -1.6
CDC1	YDR182W	CRH1	P53301	507 aa		5.06	□□□□□ -1.6
CDC1	YDR182W	STF2	P16965	84 aa		5.05	□□□□□ -1.6
CDC1	YDR182W	TRR1	P29509	319 aa	Known RBP	5.05	□□□□□ -1.6
CDC1	YDR182W	FMT1	P32785	401 aa		5.05	□□□□□ -1.6
CDC1	YDR182W	TOS8	P53147	276 aa		5.05	□□□□□ -1.6
CDC1	YDR182W	MRPL13	Q02204	264 aa		5.05	□□□□□ -1.6
CDC1	YDR182W	NRG1	Q03125	231 aa		5.05	□□□□□ -1.6
CDC1	YDR182W	YMR181C	Q03231	154 aa		5.05	□□□□□ -1.6
CDC1	YDR182W	HTB1	P02293	131 aa	Known RBP	5.04	□□□□□ -1.6
CDC1	YDR182W	YKL075C	P36083	450 aa		5.04	□□□□□ -1.6
CDC1	YDR182W	HPA3	P39979	161 aa		5.04	□□□□□ -1.6
CDC1	YDR182W	PBP4	Q07362	185 aa	Known RBP	5.04	□□□□□ -1.6
CDC1	YDR182W	MSH5	Q12175	901 aa		5.04	□□□□□ -1.6
CDC1	YDR182W	YJR112W-A	Q3E743	109 aa		5.04	□□□□□ -1.6
CDC1	YDR182W	YMR31	P19955	123 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	YBR144C	P34215	104 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	MRPL27	P36526	146 aa	Predicted RBP	5.03	□□□□□ -1.6
CDC1	YDR182W	POP2	P39008	433 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	SYG1	P40528	902 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	YJL163C	P46996	555 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	RPA34	P47006	233 aa	Predicted RBP	5.03	□□□□□ -1.6
CDC1	YDR182W	RSM27	P53305	110 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	SPO19	Q03029	223 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	CAB5	Q03941	241 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	IRC23	Q08416	157 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	BOL1	Q3E793	110 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	PET20	Q99373	253 aa		5.03	□□□□□ -1.6
CDC1	YDR182W	YPS1	P32329	569 aa		5.02	□□□□□ -1.61
CDC1	YDR182W	MIT1	P40002	666 aa		5.02	□□□□□ -1.61
CDC1	YDR182W	MSE1	P48525	536 aa		5.02	□□□□□ -1.61
CDC1	YDR182W	DUO1	P53168	247 aa	Known RBP	5.02	□□□□□ -1.61
CDC1	YDR182W	MCM21	Q06675	368 aa		5.02	□□□□□ -1.61
CDC1	YDR182W	PRM3	Q08931	133 aa		5.02	□□□□□ -1.61
CDC1	YDR182W	MIR1	P23641	311 aa	Known RBP	5.01	□□□□□ -1.61
CDC1	YDR182W	MRPL38	P35996	138 aa	Predicted RBP	5.01	□□□□□ -1.61
CDC1	YDR182W	SRY1	P36007	326 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	POP8	P38208	133 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	COS8	P38723	381 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	GEP4	P38812	185 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	COX15	P40086	486 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	MEH1	Q02205	184 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	YHP1	Q04116	353 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	RGC1	Q06108	1083 aa	Known RBP	5.01	□□□□□ -1.61
CDC1	YDR182W	SYM1	Q06563	197 aa		5.01	□□□□□ -1.61
CDC1	YDR182W	DCP1	Q12517	231 aa	Predicted RBP	5.01	□□□□□ -1.61
CDC1	YDR182W	TDH1	P00360	332 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	NOP1	P15646	327 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	MDM10	P18409	493 aa		5	□□□□□ -1.61
CDC1	YDR182W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
CDC1	YDR182W	ATP3	P38077	311 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	MBA1	P38300	278 aa		5	□□□□□ -1.61
CDC1	YDR182W	YHR138C	P38841	114 aa	Predicted RBP	5	□□□□□ -1.61
CDC1	YDR182W	SER2	P42941	309 aa		5	□□□□□ -1.61
CDC1	YDR182W	IRC18	P47056	224 aa		5	□□□□□ -1.61
CDC1	YDR182W	VBA1	Q04301	562 aa		5	□□□□□ -1.61
CDC1	YDR182W	RPS8A	P0CX39	200 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	RPS8B	P0CX40	200 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	VMA8	P32610	256 aa	Known RBP	5	□□□□□ -1.61
CDC1	YDR182W	PAN3	P36102	679 aa	Predicted RBP	5	□□□□□ -1.61
CDC1	YDR182W	IES5	P40060	125 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms