RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A DDI3P0CH64 225 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A CKS1P20486 150 aaKnown RBP1.91□□□□□ -2.1
YDR170W-AYDR170W-A ATP7P30902 174 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A SNC2P33328 115 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A TIR3P40552 269 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A BOL2P53082 120 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A HOP2P53187 214 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A RTC4P53850 401 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A CYT2Q00873 224 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A GPM2Q12008 311 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A BOL1Q3E793 110 aa1.91□□□□□ -2.1
YDR170W-AYDR170W-A ATP15P21306 62 aa1.9□□□□□ -2.11
YDR170W-AYDR170W-A YET1P35723 206 aa1.9□□□□□ -2.11
YDR170W-AYDR170W-A GLE2P40066 365 aa1.9□□□□□ -2.11
YDR170W-AYDR170W-A AYR1P40471 297 aa1.9□□□□□ -2.11
YDR170W-AYDR170W-A ARO80Q04052 950 aa1.9□□□□□ -2.11
YDR170W-AYDR170W-A FSF1Q12029 327 aaKnown RBP1.9□□□□□ -2.11
YDR170W-AYDR170W-A YHR086W-AQ3E746 53 aa1.9□□□□□ -2.11
YDR170W-AYDR170W-A MBF1O14467 151 aaKnown RBP1.89□□□□□ -2.11
YDR170W-AYDR170W-A CAF4P36130 643 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A YBR285WP38354 144 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A DSE2P38844 325 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A YNL217WP40152 326 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A YNL184CP53876 108 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A HNT1Q04344 158 aaKnown RBP1.89□□□□□ -2.11
YDR170W-AYDR170W-A FUS2Q05670 677 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A YET3Q07451 203 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A RIO1Q12196 484 aaKnown RBP1.89□□□□□ -2.11
YDR170W-AYDR170W-A IGO2Q9P305 131 aa1.89□□□□□ -2.11
YDR170W-AYDR170W-A MDH2P22133 377 aa1.88□□□□□ -2.11
YDR170W-AYDR170W-A SHE2P36068 246 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
YDR170W-AYDR170W-A SHG1P38337 142 aa1.88□□□□□ -2.11
YDR170W-AYDR170W-A PDS1P40316 373 aaPredicted RBP1.88□□□□□ -2.11
YDR170W-AYDR170W-A AGE2P40529 298 aa1.88□□□□□ -2.11
YDR170W-AYDR170W-A SKI6P46948 246 aaPredicted RBP1.88□□□□□ -2.11
YDR170W-AYDR170W-A UBC12P52491 188 aa1.88□□□□□ -2.11
YDR170W-AYDR170W-A SNF4P12904 322 aa1.87□□□□□ -2.11
YDR170W-AYDR170W-A YCR090CP25654 182 aaKnown RBP1.87□□□□□ -2.11
YDR170W-AYDR170W-A OCH1P31755 480 aa1.87□□□□□ -2.11
YDR170W-AYDR170W-A EGD2P38879 174 aaKnown RBP1.87□□□□□ -2.11
YDR170W-AYDR170W-A PEP8P40335 379 aa1.87□□□□□ -2.11
YDR170W-AYDR170W-A ARP3P47117 449 aaKnown RBP1.87□□□□□ -2.11
YDR170W-AYDR170W-A YNR077CP53758 84 aa1.87□□□□□ -2.11
YDR170W-AYDR170W-A YDR274CP87283 123 aa1.87□□□□□ -2.11
YDR170W-AYDR170W-A NOC4Q06512 552 aaPredicted RBP1.87□□□□□ -2.11
YDR170W-AYDR170W-A YDL085C-AQ3E7B7 68 aaKnown RBP1.87□□□□□ -2.11
YDR170W-AYDR170W-A ODC2Q99297 307 aa1.87□□□□□ -2.11
YDR170W-AYDR170W-A PDR18P53756 1333 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A TAH1P25638 111 aaPredicted RBP1.86□□□□□ -2.11
YDR170W-AYDR170W-A FZF1P32805 299 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A KDX1P36005 433 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A SEC72P39742 193 aaKnown RBP1.86□□□□□ -2.11
YDR170W-AYDR170W-A VTC1P40046 129 aaRIP-Chip data1.86□□□□□ -2.11not detected
YDR170W-AYDR170W-A NRK1P53915 240 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A TLG1Q03322 224 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A SML1Q04964 104 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A YOL024WQ08172 172 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A ATG40Q99325 256 aa1.86□□□□□ -2.11
YDR170W-AYDR170W-A OPY1P38271 328 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A AIM2P39721 246 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A AVT2P39981 480 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A POG1P40473 351 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A EAF6P47128 113 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A ARO8P53090 500 aaKnown RBP1.85□□□□□ -2.11
YDR170W-AYDR170W-A BUD25P85052 153 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A YLR031WQ07978 186 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A YLR036CQ07986 203 aa1.85□□□□□ -2.11
YDR170W-AYDR170W-A FMP23P38231 175 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A YBR209WP38311 105 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A GAA1P39012 614 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A YEA4P40004 342 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A SER2P42941 309 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A NUP49Q02199 472 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A SNO1Q03144 224 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A YMR315WQ04869 349 aaKnown RBP1.84□□□□□ -2.12
YDR170W-AYDR170W-A DYN3Q04949 312 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A GRX8Q05926 109 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A DGA1Q08650 418 aa1.84□□□□□ -2.12
YDR170W-AYDR170W-A CPA1P07258 411 aaKnown RBP1.83□□□□□ -2.12
YDR170W-AYDR170W-A GCY1P14065 312 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
YDR170W-AYDR170W-A PAN3P36102 679 aaPredicted RBP1.83□□□□□ -2.12
YDR170W-AYDR170W-A YER134CP40081 178 aa1.83□□□□□ -2.12
YDR170W-AYDR170W-A YJR111CP47148 283 aaKnown RBP1.83□□□□□ -2.12
YDR170W-AYDR170W-A TDA4P47153 279 aa1.83□□□□□ -2.12
YDR170W-AYDR170W-A TRX3P25372 127 aa1.82□□□□□ -2.12
YDR170W-AYDR170W-A TFC1P32367 649 aa1.82□□□□□ -2.12
YDR170W-AYDR170W-A FMP32P43557 207 aa1.82□□□□□ -2.12
YDR170W-AYDR170W-A TMA22P47089 198 aaPredicted RBP1.82□□□□□ -2.12
YDR170W-AYDR170W-A SAY1P53324 424 aa1.82□□□□□ -2.12
YDR170W-AYDR170W-A GRE1Q08969 168 aa1.82□□□□□ -2.12
YDR170W-AYDR170W-A YIL177CP40434 1758 aa1.81□□□□□ -2.12
YDR170W-AYDR170W-A YJL225CP40889 1758 aa1.81□□□□□ -2.12
YDR170W-AYDR170W-A YLR236CA0A023PZG4 107 aa1.81□□□□□ -2.12
YDR170W-AYDR170W-A POR1P04840 283 aaKnown RBP1.81□□□□□ -2.12
YDR170W-AYDR170W-A TRR1P29509 319 aaKnown RBP1.81□□□□□ -2.12
YDR170W-AYDR170W-A JAC1P53193 184 aa1.81□□□□□ -2.12
YDR170W-AYDR170W-A MPC3P53311 146 aa1.81□□□□□ -2.12
YDR170W-AYDR170W-A POP3P53833 195 aaPredicted RBP1.81□□□□□ -2.12
YDR170W-AYDR170W-A PGA1P53896 198 aa1.81□□□□□ -2.12
YDR170W-AYDR170W-A ANT1Q06497 328 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms