RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C MBF1O14467 151 aaKnown RBP2.56□□□□□ -2
SHU2YDR078C SNF4P12904 322 aa2.56□□□□□ -2
SHU2YDR078C GCY1P14065 312 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SHU2YDR078C FBA1P14540 359 aaKnown RBP2.56□□□□□ -2
SHU2YDR078C MRPS28P21771 286 aa2.56□□□□□ -2
SHU2YDR078C PEX4P29340 183 aa2.56□□□□□ -2
SHU2YDR078C RGM1Q00453 211 aa2.56□□□□□ -2
SHU2YDR078C MRPS8Q03799 155 aa2.56□□□□□ -2
SHU2YDR078C GRX8Q05926 109 aa2.56□□□□□ -2
SHU2YDR078C RIO1Q12196 484 aaKnown RBP2.56□□□□□ -2
SHU2YDR078C CMC2Q3E7A4 109 aa2.56□□□□□ -2
SHU2YDR078C QCR6P00127 147 aa2.55□□□□□ -2
SHU2YDR078C CKS1P20486 150 aaKnown RBP2.55□□□□□ -2
SHU2YDR078C ATP15P21306 62 aa2.55□□□□□ -2
SHU2YDR078C UMP1P38293 148 aa2.55□□□□□ -2
SHU2YDR078C ICE2P40499 491 aa2.55□□□□□ -2
SHU2YDR078C GVP36P40531 326 aaKnown RBP2.55□□□□□ -2
SHU2YDR078C RPL33BP41056 107 aaKnown RBP2.55□□□□□ -2
SHU2YDR078C ARP3P47117 449 aaKnown RBP2.55□□□□□ -2
SHU2YDR078C YIP3P53633 176 aa2.55□□□□□ -2
SHU2YDR078C HNT1Q04344 158 aaKnown RBP2.55□□□□□ -2
SHU2YDR078C FUS2Q05670 677 aa2.55□□□□□ -2
SHU2YDR078C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SHU2YDR078C YDL085C-AQ3E7B7 68 aaKnown RBP2.55□□□□□ -2
SHU2YDR078C TRR1P29509 319 aaKnown RBP2.54□□□□□ -2
SHU2YDR078C VPS51P36116 164 aa2.54□□□□□ -2
SHU2YDR078C ECM4P36156 370 aa2.54□□□□□ -2
SHU2YDR078C PHO88P38264 188 aaPredicted RBP2.54□□□□□ -2
SHU2YDR078C ERV15P38312 142 aa2.54□□□□□ -2
SHU2YDR078C YKE4P40544 346 aa2.54□□□□□ -2
SHU2YDR078C SKI6P46948 246 aaPredicted RBP2.54□□□□□ -2
SHU2YDR078C DOC1P53068 250 aa2.54□□□□□ -2
SHU2YDR078C YNR062CP53748 327 aa2.54□□□□□ -2
SHU2YDR078C SCL1P21243 252 aaKnown RBP2.53□□□□□ -2
SHU2YDR078C TRX3P25372 127 aa2.53□□□□□ -2
SHU2YDR078C OCH1P31755 480 aa2.53□□□□□ -2
SHU2YDR078C SNC2P33328 115 aa2.53□□□□□ -2
SHU2YDR078C ARO8P53090 500 aaKnown RBP2.53□□□□□ -2
SHU2YDR078C JAC1P53193 184 aa2.53□□□□□ -2
SHU2YDR078C RAD51P25454 400 aa2.52□□□□□ -2.01
SHU2YDR078C YKR041WP36134 250 aa2.52□□□□□ -2.01
SHU2YDR078C FMP23P38231 175 aa2.52□□□□□ -2.01
SHU2YDR078C DAN1P47178 298 aa2.52□□□□□ -2.01
SHU2YDR078C YLR460CP54007 376 aa2.52□□□□□ -2.01
SHU2YDR078C YLR031WQ07978 186 aa2.52□□□□□ -2.01
SHU2YDR078C YOR283WQ12040 230 aaKnown RBP2.52□□□□□ -2.01
SHU2YDR078C YCR090CP25654 182 aaKnown RBP2.51□□□□□ -2.01
SHU2YDR078C CLG1P35190 452 aa2.51□□□□□ -2.01
SHU2YDR078C MAK5P38112 773 aaPredicted RBP2.51□□□□□ -2.01
SHU2YDR078C SRP14P38985 146 aa2.51□□□□□ -2.01
SHU2YDR078C YJL027CP47063 138 aaPredicted RBP2.51□□□□□ -2.01
SHU2YDR078C BOL2P53082 120 aa2.51□□□□□ -2.01
SHU2YDR078C YDR274CP87283 123 aa2.51□□□□□ -2.01
SHU2YDR078C FKS1P38631 1876 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C MGT1P26188 188 aa2.5□□□□□ -2.01
SHU2YDR078C RME1P32338 300 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C YET1P35723 206 aa2.5□□□□□ -2.01
SHU2YDR078C OPY1P38271 328 aa2.5□□□□□ -2.01
SHU2YDR078C YBR285WP38354 144 aa2.5□□□□□ -2.01
SHU2YDR078C SVP26P38869 228 aa2.5□□□□□ -2.01
SHU2YDR078C AIM2P39721 246 aa2.5□□□□□ -2.01
SHU2YDR078C TIR3P40552 269 aa2.5□□□□□ -2.01
SHU2YDR078C FMP32P43557 207 aa2.5□□□□□ -2.01
SHU2YDR078C YJR111CP47148 283 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C YNL247WP53852 767 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C YNL140CP53910 189 aa2.5□□□□□ -2.01
SHU2YDR078C YMR315WQ04869 349 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C BRX1Q08235 291 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C DGA1Q08650 418 aa2.5□□□□□ -2.01
SHU2YDR078C FSF1Q12029 327 aaKnown RBP2.5□□□□□ -2.01
SHU2YDR078C ODC2Q99297 307 aa2.5□□□□□ -2.01
SHU2YDR078C RAS2P01120 322 aaKnown RBP2.49□□□□□ -2.01
SHU2YDR078C ARO7P32178 256 aa2.49□□□□□ -2.01
SHU2YDR078C YEA4P40004 342 aa2.49□□□□□ -2.01
SHU2YDR078C SER2P42941 309 aa2.49□□□□□ -2.01
SHU2YDR078C ERG25P53045 309 aa2.49□□□□□ -2.01
SHU2YDR078C AIM34Q03673 198 aa2.49□□□□□ -2.01
SHU2YDR078C ARC19P33204 171 aaKnown RBP2.48□□□□□ -2.01
SHU2YDR078C KDX1P36005 433 aa2.48□□□□□ -2.01
SHU2YDR078C YHR022CP38763 256 aa2.48□□□□□ -2.01
SHU2YDR078C NVJ1P38881 321 aa2.48□□□□□ -2.01
SHU2YDR078C FCY21P40039 528 aa2.48□□□□□ -2.01
SHU2YDR078C YER076CP40049 302 aa2.48□□□□□ -2.01
SHU2YDR078C LSM4P40070 187 aaKnown RBP2.48□□□□□ -2.01
SHU2YDR078C YNL217WP40152 326 aa2.48□□□□□ -2.01
SHU2YDR078C EAF6P47128 113 aa2.48□□□□□ -2.01
SHU2YDR078C YNR077CP53758 84 aa2.48□□□□□ -2.01
SHU2YDR078C CYT2Q00873 224 aa2.48□□□□□ -2.01
SHU2YDR078C SMD2Q06217 110 aaKnown RBP2.48□□□□□ -2.01
SHU2YDR078C DDI2P0CH63 225 aa2.47□□□□□ -2.01
SHU2YDR078C DDI3P0CH64 225 aa2.47□□□□□ -2.01
SHU2YDR078C RPS24AP0CX31 135 aaKnown RBP2.47□□□□□ -2.01
SHU2YDR078C RPS24BP0CX32 135 aaKnown RBP2.47□□□□□ -2.01
SHU2YDR078C AHC2P25649 128 aa2.47□□□□□ -2.01
SHU2YDR078C SHE2P36068 246 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SHU2YDR078C PAN3P36102 679 aaPredicted RBP2.47□□□□□ -2.01
SHU2YDR078C YER134CP40081 178 aa2.47□□□□□ -2.01
SHU2YDR078C TDA4P47153 279 aa2.47□□□□□ -2.01
SHU2YDR078C PGA1P53896 198 aa2.47□□□□□ -2.01
SHU2YDR078C NUP49Q02199 472 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms