RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W YNL198CP40166 100 aa3.84□□□□□ -1.8
SSB1YDL229W TIF34P40217 347 aaKnown RBP3.84□□□□□ -1.8
SSB1YDL229W PAU15P40585 124 aa3.84□□□□□ -1.8
SSB1YDL229W PRY1P47032 299 aa3.84□□□□□ -1.8
SSB1YDL229W TOS2P50078 622 aa3.84□□□□□ -1.8
SSB1YDL229W YGL230CP53074 147 aa3.84□□□□□ -1.8
SSB1YDL229W SDT1P53078 280 aa3.84□□□□□ -1.8
SSB1YDL229W MTL1P53214 551 aa3.84□□□□□ -1.8
SSB1YDL229W HNT1Q04344 158 aaKnown RBP3.84□□□□□ -1.8
SSB1YDL229W AVO2Q04749 426 aa3.84□□□□□ -1.8
SSB1YDL229W LOA1Q06508 300 aa3.84□□□□□ -1.8
SSB1YDL229W HRT1Q08273 121 aa3.84□□□□□ -1.8
SSB1YDL229W YOR376WQ08900 122 aa3.84□□□□□ -1.8
SSB1YDL229W TIM9O74700 87 aa3.83□□□□□ -1.8
SSB1YDL229W HIS1P00498 297 aaKnown RBP3.83□□□□□ -1.8
SSB1YDL229W GAR1P28007 205 aaKnown RBP3.83□□□□□ -1.8
SSB1YDL229W COX13P32799 129 aa3.83□□□□□ -1.8
SSB1YDL229W ZRT1P32804 376 aa3.83□□□□□ -1.8
SSB1YDL229W VID24P38263 362 aa3.83□□□□□ -1.8
SSB1YDL229W TRR2P38816 342 aa3.83□□□□□ -1.8
SSB1YDL229W YIL059CP40520 121 aa3.83□□□□□ -1.8
SSB1YDL229W ERG26P53199 349 aaKnown RBP3.83□□□□□ -1.8
SSB1YDL229W DUG3P53871 357 aa3.83□□□□□ -1.8
SSB1YDL229W VBA1Q04301 562 aa3.83□□□□□ -1.8
SSB1YDL229W YMR074CQ04773 145 aa3.83□□□□□ -1.8
SSB1YDL229W HEM25Q07534 307 aa3.83□□□□□ -1.8
SSB1YDL229W Q0182Q9ZZW1 134 aa3.83□□□□□ -1.8
SSB1YDL229W SOD2P00447 233 aa3.82□□□□□ -1.8
SSB1YDL229W PDE1P22434 369 aa3.82□□□□□ -1.8
SSB1YDL229W YJU3P28321 313 aa3.82□□□□□ -1.8
SSB1YDL229W SPS18P32572 300 aa3.82□□□□□ -1.8
SSB1YDL229W YKL151CP36059 337 aa3.82□□□□□ -1.8
SSB1YDL229W AIR1P40507 360 aaKnown RBP3.82□□□□□ -1.8
SSB1YDL229W SGN1P40561 250 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SSB1YDL229W SYF2P53277 215 aaPredicted RBP3.82□□□□□ -1.8
SSB1YDL229W SMM1P53720 384 aaKnown RBP3.82□□□□□ -1.8
SSB1YDL229W HSK3P69852 69 aa3.82□□□□□ -1.8
SSB1YDL229W NUP100Q02629 959 aa3.82□□□□□ -1.8
SSB1YDL229W YMR130WQ04223 302 aa3.82□□□□□ -1.8
SSB1YDL229W YPR114WQ06107 315 aa3.82□□□□□ -1.8
SSB1YDL229W SIR2P06700 562 aa3.81□□□□□ -1.8
SSB1YDL229W SLY41P22215 453 aa3.81□□□□□ -1.8
SSB1YDL229W PMI40P29952 429 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W MCR1P36060 302 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W ECM33P38248 429 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W TEM1P38987 245 aa3.81□□□□□ -1.8
SSB1YDL229W ISC1P40015 477 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W CCS1P40202 249 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W PEP8P40335 379 aa3.81□□□□□ -1.8
SSB1YDL229W PFS2P42841 465 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W SNO3P43544 222 aa3.81□□□□□ -1.8
SSB1YDL229W YDL186WP48568 277 aa3.81□□□□□ -1.8
SSB1YDL229W MMS2P53152 137 aa3.81□□□□□ -1.8
SSB1YDL229W SNO2P53823 222 aa3.81□□□□□ -1.8
SSB1YDL229W MSS11Q03825 758 aa3.81□□□□□ -1.8
SSB1YDL229W YMR034CQ05131 434 aaPredicted RBP3.81□□□□□ -1.8
SSB1YDL229W TAZ1Q06510 381 aa3.81□□□□□ -1.8
SSB1YDL229W YLR042CQ07990 161 aa3.81□□□□□ -1.8
SSB1YDL229W YOR059CQ08448 450 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W RDL2Q08742 149 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W YDL157CQ12082 118 aa3.81□□□□□ -1.8
SSB1YDL229W ZPS1Q12512 249 aa3.81□□□□□ -1.8
SSB1YDL229W YJR112W-AQ3E743 109 aa3.81□□□□□ -1.8
SSB1YDL229W HTA2P04912 132 aa3.81□□□□□ -1.8
SSB1YDL229W CHO1P08456 276 aa3.81□□□□□ -1.8
SSB1YDL229W TY2A-FP0CX61 438 aa3.81□□□□□ -1.8
SSB1YDL229W TY2A-GR2P0CX62 438 aa3.81□□□□□ -1.8
SSB1YDL229W RPB8P20436 146 aa3.81□□□□□ -1.8
SSB1YDL229W MRPL20P22354 195 aaPredicted RBP3.81□□□□□ -1.8
SSB1YDL229W VMA3P25515 160 aa3.81□□□□□ -1.8
SSB1YDL229W YKL107WP34251 309 aa3.81□□□□□ -1.8
SSB1YDL229W DCW1P36091 449 aa3.81□□□□□ -1.8
SSB1YDL229W PHO89P38361 574 aa3.81□□□□□ -1.8
SSB1YDL229W NDT80P38830 627 aa3.81□□□□□ -1.8
SSB1YDL229W SCD6P45978 349 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SSB1YDL229W GLO1P50107 326 aa3.81□□□□□ -1.8
SSB1YDL229W YIP5P53108 310 aa3.81□□□□□ -1.8
SSB1YDL229W MPC1P53157 130 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W YGR039WP53225 103 aa3.81□□□□□ -1.8
SSB1YDL229W ERG13P54839 491 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W BET5Q03630 159 aa3.81□□□□□ -1.8
SSB1YDL229W RAV2Q03956 351 aa3.81□□□□□ -1.8
SSB1YDL229W FIT1Q04433 528 aa3.81□□□□□ -1.8
SSB1YDL229W YPQ1Q12010 308 aa3.81□□□□□ -1.8
SSB1YDL229W RPS21BQ3E754 87 aaKnown RBP3.81□□□□□ -1.8
SSB1YDL229W PHO85P17157 305 aa3.8□□□□□ -1.8
SSB1YDL229W GAS1P22146 559 aaKnown RBP3.8□□□□□ -1.8
SSB1YDL229W YCR007CP25354 239 aa3.8□□□□□ -1.8
SSB1YDL229W VAC17P25591 423 aa3.8□□□□□ -1.8
SSB1YDL229W PRE2P30656 287 aaKnown RBP3.8□□□□□ -1.8
SSB1YDL229W HOM6P31116 359 aaKnown RBP3.8□□□□□ -1.8
SSB1YDL229W ATS1P31386 333 aa3.8□□□□□ -1.8
SSB1YDL229W SKN1P33336 771 aa3.8□□□□□ -1.8
SSB1YDL229W YKR070WP36151 352 aaKnown RBP3.8□□□□□ -1.8
SSB1YDL229W ASP1P38986 381 aaPredicted RBP3.8□□□□□ -1.8
SSB1YDL229W LYS1P38998 373 aaRIP-Chip data3.8□□□□□ -1.8not detected
SSB1YDL229W GLE2P40066 365 aa3.8□□□□□ -1.8
SSB1YDL229W DLS1P40366 167 aa3.8□□□□□ -1.8
SSB1YDL229W YIR007WP40566 764 aa3.8□□□□□ -1.8
SSB1YDL229W PAM16P42949 149 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms