RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W OKP1P53298 406 aa4.67□□□□□ -1.66
SHM1YBR263W RSM27P53305 110 aa4.67□□□□□ -1.66
SHM1YBR263W ARG5,6Q01217 863 aa4.67□□□□□ -1.66
SHM1YBR263W NRG1Q03125 231 aa4.67□□□□□ -1.66
SHM1YBR263W FIT1Q04433 528 aa4.67□□□□□ -1.66
SHM1YBR263W SYM1Q06563 197 aa4.67□□□□□ -1.66
SHM1YBR263W YDL009CQ12210 107 aa4.67□□□□□ -1.66
SHM1YBR263W VAM3Q12241 283 aa4.67□□□□□ -1.66
SHM1YBR263W PET20Q99373 253 aa4.67□□□□□ -1.66
SHM1YBR263W NHP6BP11633 99 aaKnown RBP4.66□□□□□ -1.66
SHM1YBR263W RNA14P25298 677 aaKnown RBP4.66□□□□□ -1.66
SHM1YBR263W CPR4P25334 318 aa4.66□□□□□ -1.66
SHM1YBR263W ATG22P25568 528 aa4.66□□□□□ -1.66
SHM1YBR263W ACH1P32316 526 aa4.66□□□□□ -1.66
SHM1YBR263W IES6P32617 166 aa4.66□□□□□ -1.66
SHM1YBR263W VMA11P32842 164 aa4.66□□□□□ -1.66
SHM1YBR263W SDH8P38345 138 aa4.66□□□□□ -1.66
SHM1YBR263W GZF3P42944 551 aaKnown RBP4.66□□□□□ -1.66
SHM1YBR263W YFL015CP43578 164 aa4.66□□□□□ -1.66
SHM1YBR263W SOL1P50278 321 aa4.66□□□□□ -1.66
SHM1YBR263W SLX9P53251 210 aaPredicted RBP4.66□□□□□ -1.66
SHM1YBR263W ALG9P53868 555 aaKnown RBP4.66□□□□□ -1.66
SHM1YBR263W YLR365WQ7LIF2 110 aa4.66□□□□□ -1.66
SHM1YBR263W UTP20P35194 2493 aaKnown RBP4.65□□□□□ -1.66
SHM1YBR263W ATP10P18496 279 aa4.65□□□□□ -1.66
SHM1YBR263W MIR1P23641 311 aaKnown RBP4.65□□□□□ -1.66
SHM1YBR263W PAN3P36102 679 aaPredicted RBP4.65□□□□□ -1.66
SHM1YBR263W SWD2P36104 329 aaPredicted RBP4.65□□□□□ -1.66
SHM1YBR263W PRM5P40476 318 aa4.65□□□□□ -1.66
SHM1YBR263W LSM1P47017 172 aaKnown RBP4.65□□□□□ -1.66
SHM1YBR263W YGL262WP53054 175 aa4.65□□□□□ -1.66
SHM1YBR263W RPL21AQ02753 160 aaKnown RBP4.65□□□□□ -1.66
SHM1YBR263W MRPS17Q03246 237 aaPredicted RBP4.65□□□□□ -1.66
SHM1YBR263W IRC25Q07951 179 aa4.65□□□□□ -1.66
SHM1YBR263W RDI1Q12434 202 aa4.65□□□□□ -1.66
SHM1YBR263W RPL21BQ12672 160 aaKnown RBP4.65□□□□□ -1.66
SHM1YBR263W YPR108W-AQ3E7B3 70 aa4.65□□□□□ -1.66
SHM1YBR263W UBA3Q99344 299 aa4.65□□□□□ -1.66
SHM1YBR263W RAD52P06778 471 aaKnown RBP4.64□□□□□ -1.67
SHM1YBR263W GDH1P07262 454 aaKnown RBP4.64□□□□□ -1.67
SHM1YBR263W CKA1P15790 372 aa4.64□□□□□ -1.67
SHM1YBR263W MRPL3P36516 390 aa4.64□□□□□ -1.67
SHM1YBR263W POP8P38208 133 aa4.64□□□□□ -1.67
SHM1YBR263W SUR2P38992 349 aa4.64□□□□□ -1.67
SHM1YBR263W SSO2P39926 295 aa4.64□□□□□ -1.67
SHM1YBR263W PAC2P39937 518 aa4.64□□□□□ -1.67
SHM1YBR263W WSC2P53832 503 aa4.64□□□□□ -1.67
SHM1YBR263W APJ1P53940 528 aa4.64□□□□□ -1.67
SHM1YBR263W SMX3P54999 86 aaPredicted RBP4.64□□□□□ -1.67
SHM1YBR263W MRPS16Q02608 121 aa4.64□□□□□ -1.67
SHM1YBR263W YDR415CQ04033 374 aaPredicted RBP4.64□□□□□ -1.67
SHM1YBR263W ECM18Q04623 453 aa4.64□□□□□ -1.67
SHM1YBR263W RIM9Q04734 239 aa4.64□□□□□ -1.67
SHM1YBR263W ASM4Q05166 528 aa4.64□□□□□ -1.67
SHM1YBR263W NOC4Q06512 552 aaPredicted RBP4.64□□□□□ -1.67
SHM1YBR263W YOR097CQ12274 175 aaPredicted RBP4.64□□□□□ -1.67
SHM1YBR263W TRR1P29509 319 aaKnown RBP4.63□□□□□ -1.67
SHM1YBR263W BMT5P40493 336 aa4.63□□□□□ -1.67
SHM1YBR263W TTI2P47168 421 aa4.63□□□□□ -1.67
SHM1YBR263W GPG1P53130 126 aa4.63□□□□□ -1.67
SHM1YBR263W CWC25P53854 179 aaKnown RBP4.63□□□□□ -1.67
SHM1YBR263W TSA2Q04120 196 aa4.63□□□□□ -1.67
SHM1YBR263W VBA1Q04301 562 aa4.63□□□□□ -1.67
SHM1YBR263W GIM5Q04493 163 aa4.63□□□□□ -1.67
SHM1YBR263W PRP11Q07350 266 aaPredicted RBP4.63□□□□□ -1.67
SHM1YBR263W SCP1Q08873 200 aa4.63□□□□□ -1.67
SHM1YBR263W SWT1Q12104 458 aa4.63□□□□□ -1.67
SHM1YBR263W YLR125WQ12138 136 aa4.63□□□□□ -1.67
SHM1YBR263W DGK1Q12382 290 aa4.63□□□□□ -1.67
SHM1YBR263W TDH1P00360 332 aaKnown RBP4.62□□□□□ -1.67
SHM1YBR263W REC104P33323 182 aa4.62□□□□□ -1.67
SHM1YBR263W SOR1P35497 357 aaKnown RBP4.62□□□□□ -1.67
SHM1YBR263W ADH5P38113 351 aaKnown RBP4.62□□□□□ -1.67
SHM1YBR263W RPA34P47006 233 aaPredicted RBP4.62□□□□□ -1.67
SHM1YBR263W YGL114WP53134 725 aa4.62□□□□□ -1.67
SHM1YBR263W MRPL13Q02204 264 aa4.62□□□□□ -1.67
SHM1YBR263W THI74Q04083 370 aa4.62□□□□□ -1.67
SHM1YBR263W YMR317WQ04893 1140 aa4.62□□□□□ -1.67
SHM1YBR263W SOR2Q07786 357 aa4.62□□□□□ -1.67
SHM1YBR263W YOR292CQ08743 309 aa4.62□□□□□ -1.67
SHM1YBR263W SNU23Q12368 194 aaPredicted RBP4.62□□□□□ -1.67
SHM1YBR263W TFC7Q12415 435 aa4.62□□□□□ -1.67
SHM1YBR263W HUG1Q6Q5K6 68 aa4.62□□□□□ -1.67
SHM1YBR263W VMA16P23968 213 aa4.62□□□□□ -1.67
SHM1YBR263W RPB9P27999 122 aa4.62□□□□□ -1.67
SHM1YBR263W MRP17P28778 131 aa4.62□□□□□ -1.67
SHM1YBR263W CAB5Q03941 241 aa4.62□□□□□ -1.67
SHM1YBR263W YDL086WQ07505 273 aa4.62□□□□□ -1.67
SHM1YBR263W YER145C-AA0A023PYF4 145 aa4.61□□□□□ -1.67
SHM1YBR263W ARG80P07249 177 aa4.61□□□□□ -1.67
SHM1YBR263W PUT1P09368 476 aa4.61□□□□□ -1.67
SHM1YBR263W MRP20P32387 263 aa4.61□□□□□ -1.67
SHM1YBR263W TCA17P32613 152 aa4.61□□□□□ -1.67
SHM1YBR263W UTP30P36144 274 aaKnown RBP4.61□□□□□ -1.67
SHM1YBR263W CUE1P38428 203 aa4.61□□□□□ -1.67
SHM1YBR263W COS8P38723 381 aa4.61□□□□□ -1.67
SHM1YBR263W IKI1P38874 309 aa4.61□□□□□ -1.67
SHM1YBR263W AIM24P47127 394 aa4.61□□□□□ -1.67
SHM1YBR263W UBP8P50102 471 aa4.61□□□□□ -1.67
SHM1YBR263W NIF3P53081 288 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms