RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene SPO7, Length 780 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO7	YAL009W	IFM1	P25038	676 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	FMP23	P38231	175 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	GPP2	P40106	250 aa	Known RBP	4.67	□□□□□ -1.66
SPO7	YAL009W	YJL118W	P47022	219 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	YJR011C	P47086	261 aa	Predicted RBP	4.67	□□□□□ -1.66
SPO7	YAL009W	DIE2	P50076	525 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	ERV29	P53337	310 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	YMR130W	Q04223	302 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	MGR3	Q04472	501 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	SWT1	Q12104	458 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	IES3	Q12345	250 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	YOS1	Q3E834	85 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	SUS1	Q6WNK7	96 aa		4.67	□□□□□ -1.66
SPO7	YAL009W	SEN2	P16658	377 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	YCR061W	P25639	631 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	ERG2	P32352	222 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	RNP1	P32385	249 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	UTP30	P36144	274 aa	Known RBP	4.66	□□□□□ -1.66
SPO7	YAL009W	ECM31	P38122	312 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	POP2	P39008	433 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	CAT5	P41735	233 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	VPS71	Q03433	280 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	SPG4	Q04438	115 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	DPB4	Q04603	196 aa	Known RBP	4.66	□□□□□ -1.66
SPO7	YAL009W	AEP3	Q12089	606 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	JID1	Q12350	301 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	DGK1	Q12382	290 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	YLR365W	Q7LIF2	110 aa		4.66	□□□□□ -1.66
SPO7	YAL009W	ILV5	P06168	395 aa	Known RBP	4.65	□□□□□ -1.67
SPO7	YAL009W	IKI1	P38874	309 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	JLP2	P40206	208 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	PRM5	P40476	318 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	TSA2	Q04120	196 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	RGC1	Q06108	1083 aa	Known RBP	4.65	□□□□□ -1.67
SPO7	YAL009W	STP4	Q07351	490 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	MCH1	Q07376	486 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	YPD1	Q07688	167 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	YLR031W	Q07978	186 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	YOR283W	Q12040	230 aa	Known RBP	4.65	□□□□□ -1.67
SPO7	YAL009W	MSH5	Q12175	901 aa		4.65	□□□□□ -1.67
SPO7	YAL009W	CKA1	P15790	372 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	LSB5	P25369	354 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	FEN2	P25621	512 aa	Known RBP	4.64	□□□□□ -1.67
SPO7	YAL009W	INO2	P26798	304 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	RIB7	P33312	244 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	YUH1	P35127	236 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	YKR045C	P36138	183 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	FLO10	P36170	1169 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	NOP16	P40007	231 aa	Known RBP	4.64	□□□□□ -1.67
SPO7	YAL009W	PCL7	P40186	285 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	PUS4	P48567	403 aa	Known RBP	4.64	□□□□□ -1.67
SPO7	YAL009W	YIP1	P53039	248 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	SPO19	Q03029	223 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	YDR286C	Q05530	114 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	YDL086W	Q07505	273 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	YOR292C	Q08743	309 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	SCM3	Q12334	223 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	DCP1	Q12517	231 aa	Predicted RBP	4.64	□□□□□ -1.67
SPO7	YAL009W	YPR108W-A	Q3E7B3	70 aa		4.64	□□□□□ -1.67
SPO7	YAL009W	STF1	P01098	86 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	PET54	P10834	293 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	ROX3	P25046	220 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	MIG1	P27705	504 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	MRP20	P32387	263 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	MSS1	P32559	526 aa	Predicted RBP	4.63	□□□□□ -1.67
SPO7	YAL009W	SPS18	P32572	300 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	RAD23	P32628	398 aa	Known RBP	4.63	□□□□□ -1.67
SPO7	YAL009W	YHK8	P38776	514 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	YHR122W	P38829	231 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	MIT1	P40002	666 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	BMT5	P40493	336 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	RPA43	P46669	326 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	RPL9B	P51401	191 aa	Known RBP	4.63	□□□□□ -1.67
SPO7	YAL009W	ALG9	P53868	555 aa	Known RBP	4.63	□□□□□ -1.67
SPO7	YAL009W	YML018C	Q03730	393 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	LPP1	Q04396	274 aa		4.63	□□□□□ -1.67
SPO7	YAL009W	MRPL23	Q12487	163 aa	Predicted RBP	4.63	□□□□□ -1.67
SPO7	YAL009W	CDC23	P16522	626 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	RNA14	P25298	677 aa	Known RBP	4.62	□□□□□ -1.67
SPO7	YAL009W	FMT1	P32785	401 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	MRPL27	P36526	146 aa	Predicted RBP	4.62	□□□□□ -1.67
SPO7	YAL009W	MBA1	P38300	278 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	HPA3	P39979	161 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	FCY21	P40039	528 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	YIL077C	P40508	320 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	YJL213W	P40896	331 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	IRC18	P47056	224 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	CRH1	P53301	507 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	SMX3	P54999	86 aa	Predicted RBP	4.62	□□□□□ -1.67
SPO7	YAL009W	TIM11	P81449	96 aa	Predicted RBP	4.62	□□□□□ -1.67
SPO7	YAL009W	YFH1	Q07540	174 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	HUG1	Q6Q5K6	68 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	UBA3	Q99344	299 aa		4.62	□□□□□ -1.67
SPO7	YAL009W	YHR212W-A	P0CX91	67 aa		4.61	□□□□□ -1.67
SPO7	YAL009W	MRS4	P23500	304 aa		4.61	□□□□□ -1.67
SPO7	YAL009W	TRR1	P29509	319 aa	Known RBP	4.61	□□□□□ -1.67
SPO7	YAL009W	PRS4	P38063	326 aa	Predicted RBP	4.61	□□□□□ -1.67
SPO7	YAL009W	VPS55	P47111	140 aa		4.61	□□□□□ -1.67
SPO7	YAL009W	FMP42	Q04991	504 aa		4.61	□□□□□ -1.67
SPO7	YAL009W	SYM1	Q06563	197 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms