RNA–Protein interactions for RNA: RUF22

RUF22, Transcript of RNA of Unknown Function, yeast

Gene RUF22, Length 515 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF22	RUF22	TVP38	P36164	337 aa		0.73	□□□□□ -2.29
RUF22	RUF22	YCR087C-A	P37263	153 aa		0.73	□□□□□ -2.29
RUF22	RUF22	SIP3	P38717	1229 aa		0.73	□□□□□ -2.29
RUF22	RUF22	GAA1	P39012	614 aa		0.73	□□□□□ -2.29
RUF22	RUF22	YRB2	P40517	327 aa		0.73	□□□□□ -2.29
RUF22	RUF22	ERJ5	P43613	295 aa	Predicted RBP	0.73	□□□□□ -2.29
RUF22	RUF22	YGR050C	P53231	118 aa		0.73	□□□□□ -2.29
RUF22	RUF22	LSM7	P53905	115 aa	Known RBP	0.73	□□□□□ -2.29
RUF22	RUF22	COG5	P53951	403 aa		0.73	□□□□□ -2.29
RUF22	RUF22	YDR249C	Q03787	373 aa		0.73	□□□□□ -2.29
RUF22	RUF22	FSF1	Q12029	327 aa	Known RBP	0.73	□□□□□ -2.29
RUF22	RUF22	MCP1	Q12106	302 aa		0.73	□□□□□ -2.29
RUF22	RUF22	YDL180W	Q12301	547 aa		0.73	□□□□□ -2.29
RUF22	RUF22	ATG40	Q99325	256 aa		0.73	□□□□□ -2.29
RUF22	RUF22	IKI3	Q06706	1349 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	YDR157W	A0A023PZE8	133 aa		0.72	□□□□□ -2.29
RUF22	RUF22	HTB1	P02293	131 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	HTB2	P02294	131 aa		0.72	□□□□□ -2.29
RUF22	RUF22	VAR1	P02381	398 aa		0.72	□□□□□ -2.29
RUF22	RUF22	CPA1	P07258	411 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	RPB3	P16370	318 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	MER1	P16523	270 aa		0.72	□□□□□ -2.29
RUF22	RUF22	UTP30	P36144	274 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	AIM2	P39721	246 aa		0.72	□□□□□ -2.29
RUF22	RUF22	RFC4	P40339	323 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	MPA43	P53583	542 aa	Predicted RBP	0.72	□□□□□ -2.29
RUF22	RUF22	YNR077C	P53758	84 aa		0.72	□□□□□ -2.29
RUF22	RUF22	CUS2	P53830	285 aa	Predicted RBP	0.72	□□□□□ -2.29
RUF22	RUF22	TIM11	P81449	96 aa	Predicted RBP	0.72	□□□□□ -2.29
RUF22	RUF22	CUE4	Q04201	117 aa	Predicted RBP	0.72	□□□□□ -2.29
RUF22	RUF22	YRA1	Q12159	226 aa	Known RBP	0.72	□□□□□ -2.29
RUF22	RUF22	PDR18	P53756	1333 aa		0.71	□□□□□ -2.3
RUF22	RUF22	SIR2	P06700	562 aa		0.71	□□□□□ -2.3
RUF22	RUF22	YCR090C	P25654	182 aa	Known RBP	0.71	□□□□□ -2.3
RUF22	RUF22	RFA3	P26755	122 aa	Known RBP	0.71	□□□□□ -2.3
RUF22	RUF22	SPS18	P32572	300 aa		0.71	□□□□□ -2.3
RUF22	RUF22	TAF14	P35189	244 aa		0.71	□□□□□ -2.3
RUF22	RUF22	YKT6	P36015	200 aa	Known RBP	0.71	□□□□□ -2.3
RUF22	RUF22	AIM25	P47140	327 aa		0.71	□□□□□ -2.3
RUF22	RUF22	GET1	P53192	235 aa		0.71	□□□□□ -2.3
RUF22	RUF22	YDR274C	P87283	123 aa		0.71	□□□□□ -2.3
RUF22	RUF22	HNT1	Q04344	158 aa	Known RBP	0.71	□□□□□ -2.3
RUF22	RUF22	GGA1	Q06336	557 aa		0.71	□□□□□ -2.3
RUF22	RUF22	GIS3	Q12418	502 aa		0.71	□□□□□ -2.3
RUF22	RUF22	YHR214C-E	Q8TGK0	99 aa		0.71	□□□□□ -2.3
RUF22	RUF22	YFR032C-B	Q8TGU2	87 aa		0.71	□□□□□ -2.3
RUF22	RUF22	ODC2	Q99297	307 aa		0.71	□□□□□ -2.3
RUF22	RUF22	YLR236C	A0A023PZG4	107 aa		0.7	□□□□□ -2.3
RUF22	RUF22	CDC36	P06100	191 aa	Predicted RBP	0.7	□□□□□ -2.3
RUF22	RUF22	ARG80	P07249	177 aa		0.7	□□□□□ -2.3
RUF22	RUF22	MATALPHA2	P0CY08	210 aa		0.7	□□□□□ -2.3
RUF22	RUF22	HMLALPHA2	P0CY09	210 aa		0.7	□□□□□ -2.3
RUF22	RUF22	CBF1	P17106	351 aa		0.7	□□□□□ -2.3
RUF22	RUF22	YPK2	P18961	677 aa		0.7	□□□□□ -2.3
RUF22	RUF22	KDX1	P36005	433 aa		0.7	□□□□□ -2.3
RUF22	RUF22	OPY1	P38271	328 aa		0.7	□□□□□ -2.3
RUF22	RUF22	KNH1	P50112	268 aa		0.7	□□□□□ -2.3
RUF22	RUF22	MMS2	P53152	137 aa		0.7	□□□□□ -2.3
RUF22	RUF22	POP3	P53833	195 aa	Predicted RBP	0.7	□□□□□ -2.3
RUF22	RUF22	UBC7	Q02159	165 aa		0.7	□□□□□ -2.3
RUF22	RUF22	DYN3	Q04949	312 aa		0.7	□□□□□ -2.3
RUF22	RUF22	YHR007C-A	Q07074	71 aa		0.7	□□□□□ -2.3
RUF22	RUF22	ABP140	Q08641	628 aa	Known RBP	0.7	□□□□□ -2.3
RUF22	RUF22	GET4	Q12125	312 aa		0.7	□□□□□ -2.3
RUF22	RUF22	CYR1	P08678	2026 aa	Known RBP	0.69	□□□□□ -2.3
RUF22	RUF22	RPL27A	P0C2H6	136 aa	Known RBP	0.69	□□□□□ -2.3
RUF22	RUF22	SEC11	P15367	167 aa		0.69	□□□□□ -2.3
RUF22	RUF22	ATP15	P21306	62 aa		0.69	□□□□□ -2.3
RUF22	RUF22	TVP23	P38962	199 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YER034W	P40022	185 aa	Known RBP	0.69	□□□□□ -2.3
RUF22	RUF22	YER076C	P40049	302 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YER134C	P40081	178 aa		0.69	□□□□□ -2.3
RUF22	RUF22	TMA22	P47089	198 aa	Predicted RBP	0.69	□□□□□ -2.3
RUF22	RUF22	RTC4	P53850	401 aa		0.69	□□□□□ -2.3
RUF22	RUF22	PET191	Q02772	108 aa		0.69	□□□□□ -2.3
RUF22	RUF22	RCE1	Q03530	315 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YMR295C	Q03559	197 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YPR174C	Q06616	221 aa	Predicted RBP	0.69	□□□□□ -2.3
RUF22	RUF22	YLR031W	Q07978	186 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YLR036C	Q07986	203 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YOL160W	Q08321	113 aa		0.69	□□□□□ -2.3
RUF22	RUF22	YNG1	Q08465	219 aa		0.69	□□□□□ -2.3
RUF22	RUF22	RAD28	Q12021	506 aa		0.69	□□□□□ -2.3
RUF22	RUF22	ADF1	Q2V2Q1	113 aa		0.69	□□□□□ -2.3
RUF22	RUF22	MBF1	O14467	151 aa	Known RBP	0.68	□□□□□ -2.3
RUF22	RUF22	MRS1	P07266	363 aa		0.68	□□□□□ -2.3
RUF22	RUF22	SNF4	P12904	322 aa		0.68	□□□□□ -2.3
RUF22	RUF22	CNB1	P25296	175 aa		0.68	□□□□□ -2.3
RUF22	RUF22	OCH1	P31755	480 aa		0.68	□□□□□ -2.3
RUF22	RUF22	ASF2	P32448	525 aa	Predicted RBP	0.68	□□□□□ -2.3
RUF22	RUF22	PAN3	P36102	679 aa	Predicted RBP	0.68	□□□□□ -2.3
RUF22	RUF22	RIO2	P40160	425 aa	Known RBP	0.68	□□□□□ -2.3
RUF22	RUF22	SKI6	P46948	246 aa	Predicted RBP	0.68	□□□□□ -2.3
RUF22	RUF22	DGA1	Q08650	418 aa		0.68	□□□□□ -2.3
RUF22	RUF22	YNL146C-A	Q3E7Z1	64 aa		0.68	□□□□□ -2.3
RUF22	RUF22	MSB2	P32334	1306 aa		0.67	□□□□□ -2.3
RUF22	RUF22	JIP3	O13555	125 aa		0.67	□□□□□ -2.3
RUF22	RUF22	RPS24A	P0CX31	135 aa	Known RBP	0.67	□□□□□ -2.3
RUF22	RUF22	RPS24B	P0CX32	135 aa	Known RBP	0.67	□□□□□ -2.3
RUF22	RUF22	CAF4	P36130	643 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms