RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 PRM5P40476 318 aa8.7□□□□□ -1.02
RDN18-1RDN18-1 DXO1Q06349 442 aa8.7□□□□□ -1.02
RDN18-1RDN18-1 YPD1Q07688 167 aa8.7□□□□□ -1.02
RDN18-1RDN18-1 WHI5Q12416 295 aa8.7□□□□□ -1.02
RDN18-1RDN18-1 AGC1Q12482 902 aa8.7□□□□□ -1.02
RDN18-1RDN18-1 FOL3Q12676 427 aaPredicted RBP8.7□□□□□ -1.02
RDN18-1RDN18-1 SDH8P38345 138 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 VMA21P41806 77 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 TAF4P50105 388 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 HED1Q03937 162 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 YOL029CQ08187 201 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 RNH203Q12338 110 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 SNU23Q12368 194 aaPredicted RBP8.69□□□□□ -1.02
RDN18-1RDN18-1 TRA1P38811 3744 aa8.69□□□□□ -1.02
RDN18-1RDN18-1 RPB10P22139 70 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 UPS2P35200 230 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 MOG1P47123 218 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 DAN1P47178 298 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 PEF1P53238 335 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 FSH2Q05015 223 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 DCS1Q06151 350 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 PAM18Q07914 168 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 YPL264CQ08980 353 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 CLB6P32943 380 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 NTF2P33331 125 aaKnown RBP8.68□□□□□ -1.02
RDN18-1RDN18-1 RPL14AP36105 138 aaKnown RBP8.68□□□□□ -1.02
RDN18-1RDN18-1 YBR292CP38357 123 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 RPL14BP38754 138 aaKnown RBP8.68□□□□□ -1.02
RDN18-1RDN18-1 PCL7P40186 285 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 GTT1P40582 234 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 SIP18P50263 79 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 YDR114CQ04597 100 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 UPS1Q05776 175 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 YFH1Q07540 174 aa8.68□□□□□ -1.02
RDN18-1RDN18-1 SEC62P21825 274 aa8.67□□□□□ -1.02
RDN18-1RDN18-1 APA2P22108 325 aa8.67□□□□□ -1.02
RDN18-1RDN18-1 XPT1P47165 209 aa8.67□□□□□ -1.02
RDN18-1RDN18-1 TIM21P53220 239 aa8.67□□□□□ -1.02
RDN18-1RDN18-1 RPB3P16370 318 aaKnown RBP8.66□□□□□ -1.02
RDN18-1RDN18-1 SHM2P37291 469 aaKnown RBP8.66□□□□□ -1.02
RDN18-1RDN18-1 MOH1P38191 138 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 BNS1P50084 137 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 YDC1Q02896 317 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 ZEO1Q08245 113 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 USV1Q12132 391 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 SPO13P23624 291 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 CDC50P25656 391 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 AHT1P29589 182 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 YMR262WP38430 313 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 ERG25P53045 309 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 GEP7P53171 287 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 PDR17P53844 350 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 DGK1Q12382 290 aa8.66□□□□□ -1.02
RDN18-1RDN18-1 HEM4P06174 275 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 SDH4P37298 181 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 CUE1P38428 203 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 PEX7P39108 375 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 SEC24P40482 926 aaKnown RBP8.65□□□□□ -1.02
RDN18-1RDN18-1 SLM1P40485 686 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 WSC2P53832 503 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 HSK3P69852 69 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 RSM10Q03201 203 aa8.65□□□□□ -1.02
RDN18-1RDN18-1 GCN1P33892 2672 aaKnown RBP8.64□□□□□ -1.03
RDN18-1RDN18-1 ADH3P07246 375 aaKnown RBP8.64□□□□□ -1.03
RDN18-1RDN18-1 RPL35AP0CX84 120 aaKnown RBP8.64□□□□□ -1.03
RDN18-1RDN18-1 RPL35BP0CX85 120 aaKnown RBP8.64□□□□□ -1.03
RDN18-1RDN18-1 YKL107WP34251 309 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 GON7P46984 123 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 YAP1802P53309 568 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 YDR157WA0A023PZE8 133 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 REC104P33323 182 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 YOX1P34161 385 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 YGR050CP53231 118 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 SMM1P53720 384 aaKnown RBP8.64□□□□□ -1.03
RDN18-1RDN18-1 ALG12P53730 551 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 FCY22Q12119 530 aa8.64□□□□□ -1.03
RDN18-1RDN18-1 POF1P25576 258 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 LAC1P28496 418 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 YBR013CP38215 129 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 RMD6P39975 231 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 UBC13P52490 153 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 RAD28Q12021 506 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 BOL1Q3E793 110 aa8.63□□□□□ -1.03
RDN18-1RDN18-1 YGR269WP40326 108 aa8.62□□□□□ -1.03
RDN18-1RDN18-1 HXT14P42833 540 aa8.62□□□□□ -1.03
RDN18-1RDN18-1 ARP3P47117 449 aaKnown RBP8.62□□□□□ -1.03
RDN18-1RDN18-1 YGL262WP53054 175 aa8.62□□□□□ -1.03
RDN18-1RDN18-1 API2Q04413 109 aa8.62□□□□□ -1.03
RDN18-1RDN18-1 MSL5Q12186 476 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
RDN18-1RDN18-1 MRPL4P36517 319 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 YCK3P39962 524 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 RPN14P53196 417 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 PAU4P53427 120 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 HCH1P53834 153 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 SME1Q12330 94 aaPredicted RBP8.61□□□□□ -1.03
RDN18-1RDN18-1 URA5P13298 226 aaKnown RBP8.61□□□□□ -1.03
RDN18-1RDN18-1 ROX3P25046 220 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 PHS1P40857 217 aa8.61□□□□□ -1.03
RDN18-1RDN18-1 SMD3P43321 101 aaKnown RBP8.61□□□□□ -1.03
RDN18-1RDN18-1 YFL051CP43552 160 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms