RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 IFT74Q96LB3 600 aa14.57□□□□□ -0.08
SPG7-207ENST00000563218 UROC1Q96N76 676 aa14.57□□□□□ -0.08
SPG7-207ENST00000563218 CORO1BQ9BR76 489 aa14.57□□□□□ -0.08
SPG7-207ENST00000563218 PYM1Q9BRP8 204 aaKnown RBP14.57□□□□□ -0.08
SPG7-207ENST00000563218 RUSC1Q9BVN2 902 aa14.57□□□□□ -0.08
SPG7-207ENST00000563218 TARS2Q9BW92 718 aaKnown RBP14.57□□□□□ -0.08
SPG7-207ENST00000563218 TNFSF13BQ9Y275 285 aa14.57□□□□□ -0.08
SPG7-207ENST00000563218 ARHGEF37A1IGU5 675 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 CCDC169A6NNP5 214 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 K7ERI5 159 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 TBC1D4O60343 1298 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 HIP1RO75146 1068 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 ECI2O75521 394 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 ABLIM3O94929 683 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 LRG1P02750 347 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 CDC25AP30304 524 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 UBA7P41226 1012 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
SPG7-207ENST00000563218 EFNA5P52803 228 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 MAPK7Q13164 816 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 HAUS3Q68CZ6 603 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 LRSAM1Q6UWE0 723 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 USP49Q70CQ1 688 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 SNX29Q8TEQ0 813 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 KIFAP3Q92845 792 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 EPSTI1Q96J88 318 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 ARHGAP28Q9P2N2 729 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 NCOR2Q9Y618 2525 aa14.56□□□□□ -0.08
SPG7-207ENST00000563218 KIAA1549LQ6ZVL6 1849 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 GREB1Q4ZG55 1949 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 PRRG1O14668 218 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 POLR2DO15514 142 aaKnown RBP14.55□□□□□ -0.08
SPG7-207ENST00000563218 MOSPD3O75425 235 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 GJA1P17302 382 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 PROZP22891 400 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 PFKPQ01813 784 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 RSPO4Q2I0M5 234 aaPredicted RBP14.55□□□□□ -0.08
SPG7-207ENST00000563218 ZNF528Q3MIS6 628 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 FAM78AQ5JUQ0 283 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 KRBA2Q6ZNG9 492 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 ZNF687Q8N1G0 1237 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 PDILTQ8N807 584 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 ZNF461Q8TAF7 563 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 CLDN23Q96B33 292 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 ELSPBP1Q96BH3 223 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 ZSWIM3Q96MP5 696 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 CCDC94Q9BW85 323 aaPredicted RBP14.55□□□□□ -0.08
SPG7-207ENST00000563218 OSBPL6Q9BZF3 934 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 CYP4F11Q9HBI6 524 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 AVENQ9NQS1 362 aaPredicted RBP14.55□□□□□ -0.08
SPG7-207ENST00000563218 LRWD1Q9UFC0 647 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 CCDC39Q9UFE4 941 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 TUBGCP4Q9UGJ1 667 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 USP25Q9UHP3 1055 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 HOOK1Q9UJC3 728 aaKnown RBP14.55□□□□□ -0.08
SPG7-207ENST00000563218 FBXL5Q9UKA1 691 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 FBXO4Q9UKT5 387 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 NDRG2Q9UN36 371 aaKnown RBP14.55□□□□□ -0.08
SPG7-207ENST00000563218 INSL5Q9Y5Q6 135 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 SPTBN2O15020 2390 aa14.55□□□□□ -0.08
SPG7-207ENST00000563218 SPAG17Q6Q759 2223 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 SFI1A8K8P3 1242 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 SLC16A4O15374 487 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 TRAPPC3O43617 180 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 PTPN2P17706 415 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 MUTP22033 750 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 SPAG1Q07617 926 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 MTAPQ13126 283 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 MRPL58Q14197 206 aaKnown RBP14.54□□□□□ -0.08
SPG7-207ENST00000563218 PDIA5Q14554 519 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 VITQ6UXI7 678 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 RBM43Q6ZSC3 357 aaKnown RBP14.54□□□□□ -0.08
SPG7-207ENST00000563218 CEP57L1Q8IYX8 460 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 IGSF22Q8N9C0 903 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 ZBTB44Q8NCP5 570 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 NELL1Q92832 810 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 DHX58Q96C10 678 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 MMTAG2Q9BU76 263 aaKnown RBP14.54□□□□□ -0.08
SPG7-207ENST00000563218 MRPL4Q9BYD3 311 aaKnown RBP14.54□□□□□ -0.08
SPG7-207ENST00000563218 PANK2Q9BZ23 570 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 CCSER1Q9C0I3 900 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 PRMT8Q9NR22 394 aaPredicted RBP14.54□□□□□ -0.08
SPG7-207ENST00000563218 DLL3Q9NYJ7 618 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 GDE1Q9NZC3 331 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 CEP72Q9P209 647 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 CNTN3Q9P232 1028 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 SERTAD1Q9UHV2 236 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 SMG5Q9UPR3 1016 aaKnown RBP14.54□□□□□ -0.08
SPG7-207ENST00000563218 EPG5Q9HCE0 2579 aa14.54□□□□□ -0.08
SPG7-207ENST00000563218 SPTLC1O15269 473 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 LILRB5O75023 590 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 VNN2O95498 520 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 TDGF1P13385 188 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 ATF2P15336 505 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 KCNE1P15382 129 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 VIPR2P41587 438 aa14.53□□□□□ -0.08
SPG7-207ENST00000563218 YARSP54577 528 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms