RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PIAS3Q9Y6X2 628 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 EP300Q09472 2414 aaPredicted RBP14.14□□□□□ -0.15
SF3B3-202ENST00000562722 TRIP11Q15643 1979 aa14.14□□□□□ -0.15
SF3B3-202ENST00000562722 ZNF263O14978 683 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 HNRNPDLO14979 420 aaKnown RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 XPOTO43592 962 aaKnown RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 KRT18P05783 430 aaKnown RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 OR4Q2P0C623 313 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 PPP2R5DQ14738 602 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 VITQ6UXI7 678 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 RASSF8Q8NHQ8 419 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 DEPDC1BQ8WUY9 529 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 FAM3CQ92520 227 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 FAM212AQ96EL1 285 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 OXCT2Q9BYC2 517 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 ZNF334Q9HCZ1 680 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 KCND2Q9NZV8 630 aa14.13□□□□□ -0.15
SF3B3-202ENST00000562722 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-202ENST00000562722 MED19A0JLT2 244 aaPredicted RBP14.12□□□□□ -0.15
SF3B3-202ENST00000562722 K7ENM7 598 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 M0QZQ0 153 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 NRG2O14511 850 aaPredicted RBP14.12□□□□□ -0.15
SF3B3-202ENST00000562722 FAM13AO94988 1023 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 LRPAP1P30533 357 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 TNFSF9P41273 254 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 ALDH1A3P47895 512 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 EPHB3P54753 998 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 SLC12A3P55017 1021 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 DUSP4Q13115 394 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 KYAT1Q16773 422 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 RSPO4Q2I0M5 234 aaPredicted RBP14.12□□□□□ -0.15
SF3B3-202ENST00000562722 HYIQ5T013 277 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 HAUS6Q7Z4H7 955 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 GPBP1Q86WP2 473 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 KCTD17Q8N5Z5 321 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 MYCT1Q8N699 235 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 ZBTB44Q8NCP5 570 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 SHKBP1Q8TBC3 707 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 CSGALNACT1Q8TDX6 532 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 KIF2CQ99661 725 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 GPR88Q9GZN0 384 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 EPC1Q9H2F5 836 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 RPF1Q9H9Y2 349 aaKnown RBP14.12□□□□□ -0.15
SF3B3-202ENST00000562722 LMAN1LQ9HAT1 526 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 PRMT8Q9NR22 394 aaPredicted RBP14.12□□□□□ -0.15
SF3B3-202ENST00000562722 GMEB2Q9UKD1 530 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 RAB23Q9ULC3 237 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 CACNA1IQ9P0X4 2223 aa14.12□□□□□ -0.15
SF3B3-202ENST00000562722 PATJQ8NI35 1801 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 A0A1W2PRU2 124 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 TTC26A0AVF1 554 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 HEPACAM2A8MVW5 462 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 LACTBL1A8MY62 500 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 CITO14578 2027 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 MOSPD3O75425 235 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 OAZ2O95190 189 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 CYP3A5P20815 502 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 KPNA1P52294 538 aaPredicted RBP14.11□□□□□ -0.15
SF3B3-202ENST00000562722 NCKAP1LP55160 1127 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 FZD5Q13467 585 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 TMEM119Q4V9L6 283 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 OVOS1Q6IE37 1185 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 ARMCX5Q6P1M9 558 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 MAP4K3Q8IVH8 894 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 MFSD6LQ8IWD5 586 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 GPR161Q8N6U8 529 aaKnown RBP14.11□□□□□ -0.15
SF3B3-202ENST00000562722 BEST2Q8NFU1 509 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 FAM200AQ8TCP9 573 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 E2F7Q96AV8 911 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 MSTO1Q9BUK6 570 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 FAM126AQ9BYI3 521 aaPredicted RBP14.11□□□□□ -0.15
SF3B3-202ENST00000562722 HAPLN2Q9GZV7 340 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 CHRDQ9H2X0 955 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 TBX20Q9UMR3 447 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 USP18Q9UMW8 372 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 SLC27A5Q9Y2P5 690 aa14.11□□□□□ -0.15
SF3B3-202ENST00000562722 SHISA7A6NL88 538 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 TULP1O00294 542 aaPredicted RBP14.1□□□□□ -0.15
SF3B3-202ENST00000562722 DPYSL4O14531 572 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 OGTO15294 1046 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 ODC1P11926 461 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 CCNE1P24864 410 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 UBA7P41226 1012 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 CCR3P51677 355 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 EPHA5P54756 1037 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 NRLP54845 237 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 RABEP1Q15276 862 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 ENOX2Q16206 610 aaKnown RBP14.1□□□□□ -0.15
SF3B3-202ENST00000562722 ARSHQ5FYA8 562 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 ARL6IP4Q66PJ3 421 aaKnown RBP14.1□□□□□ -0.15
SF3B3-202ENST00000562722 GPIHBP1Q8IV16 184 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 REEP2Q9BRK0 252 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 IER2Q9BTL4 223 aa14.1□□□□□ -0.15
SF3B3-202ENST00000562722 TRPV4Q9HBA0 871 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms