RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 KLHL32Q96NJ5 620 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 PUS7Q96PZ0 661 aaKnown RBP6.05□□□□□ -1.44
USP8-218ENST00000561330 TAAR9Q96RI9 348 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 TLR10Q9BXR5 811 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 IMPG2Q9BZV3 1241 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 TMPRSS5Q9H3S3 457 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 KLHL42Q9P2K6 505 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 ANKFY1Q9P2R3 1169 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 HSFX1Q9UBD0 423 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 DKK2Q9UBU2 259 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 SRRDQ9UH36 339 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 CDYLQ9Y232 598 aa6.05□□□□□ -1.44
USP8-218ENST00000561330 UNC119BA6NIH7 251 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 H3BML4 177 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 CYR61O00622 381 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 PRPF3O43395 683 aaKnown RBP6.04□□□□□ -1.44
USP8-218ENST00000561330 CDKL5O76039 1030 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 FOSP01100 380 aaPredicted RBP6.04□□□□□ -1.44
USP8-218ENST00000561330 ZNF844Q08AG5 666 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 MINDY4Q4G0A6 757 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 TMIEQ8NEW7 156 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 KLHDC4Q8TBB5 520 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 LARP4BQ92615 738 aaKnown RBP6.04□□□□□ -1.44
USP8-218ENST00000561330 TNPO1Q92973 898 aaKnown RBP6.04□□□□□ -1.44
USP8-218ENST00000561330 SLC35A4Q96G79 324 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 BOD1Q96IK1 185 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 ADAM2Q99965 735 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 SCAND2PQ9GZW5 306 aaPredicted RBP6.04□□□□□ -1.44
USP8-218ENST00000561330 MRPL46Q9H2W6 279 aaKnown RBP6.04□□□□□ -1.44
USP8-218ENST00000561330 GALNT9Q9HCQ5 603 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 PCDHA1Q9Y5I3 950 aa6.04□□□□□ -1.44
USP8-218ENST00000561330 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
USP8-218ENST00000561330 SPDEFO95238 335 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 HTR1BP28222 390 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 PSMC1P62191 440 aaKnown RBP6.03□□□□□ -1.44
USP8-218ENST00000561330 NKX6-1P78426 367 aaPredicted RBP6.03□□□□□ -1.44
USP8-218ENST00000561330 PIGFQ07326 219 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 PLS1Q14651 629 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 MLC1Q15049 377 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.03□□□□□ -1.44
USP8-218ENST00000561330 PPP1R3BQ86XI6 285 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 MYO1HQ8N1T3 1032 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 MAGEB6Q8N7X4 407 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 SCAMP4Q969E2 229 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 ACO2Q99798 780 aaKnown RBP6.03□□□□□ -1.44
USP8-218ENST00000561330 SERHL2Q9H4I8 314 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 ARMT1Q9H993 441 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 ZDHHC8Q9ULC8 765 aa6.03□□□□□ -1.44
USP8-218ENST00000561330 ZNF785A8K8V0 405 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 AKAP8O43823 692 aaKnown RBP6.02□□□□□ -1.45
USP8-218ENST00000561330 UBXN7O94888 489 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 RARBP10826 455 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 PHKA1P46020 1223 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 KLF10Q13118 480 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 TP53BP2Q13625 1128 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 KIF22Q14807 665 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 CYP2A13Q16696 494 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 DAAM2Q86T65 1068 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 ULK2Q8IYT8 1036 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 CFAP52Q8N1V2 620 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 ZBTB34Q8NCN2 500 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 PDPRQ8NCN5 879 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 PPP1R35Q8TAP8 253 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 BRIX1Q8TDN6 353 aaKnown RBP6.02□□□□□ -1.45
USP8-218ENST00000561330 TSR2Q969E8 191 aaKnown RBP6.02□□□□□ -1.45
USP8-218ENST00000561330 WDR11Q9BZH6 1224 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 TMEM74BQ9NUR3 256 aa6.02□□□□□ -1.45
USP8-218ENST00000561330 MYADML2A6NDP7 307 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 TMEM191CA6NGB0 347 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 PRSS29PA6NIE9 313 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 ERC2O15083 957 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 B3GALT2O43825 422 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 MATN4O95460 622 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 CHEK2O96017 543 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 AHSGP02765 367 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 GNAI2P04899 355 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 ZNF135P52742 658 aaPredicted RBP6.01□□□□□ -1.45
USP8-218ENST00000561330 FHL2Q14192 279 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 ZNF627Q7L945 461 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 CLNKQ7Z7G1 428 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 COLGALT2Q8IYK4 626 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 LCORLQ8N3X6 602 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 AMER2Q8N7J2 671 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 NACC2Q96BF6 587 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 RUNDC1Q96C34 613 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 PRRX2Q99811 253 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 SIK2Q9H0K1 926 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 CYP4F11Q9HBI6 524 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 GPR35Q9HC97 309 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 SARS2Q9NP81 518 aaKnown RBP6.01□□□□□ -1.45
USP8-218ENST00000561330 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.01□□□□□ -1.45
USP8-218ENST00000561330 ING1Q9UK53 422 aaPredicted RBP6.01□□□□□ -1.45
USP8-218ENST00000561330 NEU2Q9Y3R4 380 aa6.01□□□□□ -1.45
USP8-218ENST00000561330 A0A088AWK7 358 aa6□□□□□ -1.45
USP8-218ENST00000561330 CCDC195A0A1B0GUA6 201 aa6□□□□□ -1.45
USP8-218ENST00000561330 GOLGA6CA6NDK9 693 aa6□□□□□ -1.45
USP8-218ENST00000561330 GOLGA6BA6NDN3 693 aa6□□□□□ -1.45
USP8-218ENST00000561330 GOLGA6DP0CG33 693 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms