RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 MAPK13O15264 365 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
HDAC7-230ENST00000552960 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 MUM1Q2TAK8 710 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 CD101Q93033 1021 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 KLRG1Q96E93 195 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 TBC1D10AQ9BXI6 508 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 PRKAG3Q9UGI9 489 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 TELO2Q9Y4R8 837 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 GOLGA8SH3BPF8 625 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 LUC7L3O95232 432 aaKnown RBP13.1□□□□□ -0.31
HDAC7-230ENST00000552960 ICAM1P05362 532 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 CYP11B1P15538 503 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 CD58P19256 250 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 OVGP1Q12889 678 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 BLMHQ13867 455 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 CYP1B1Q16678 543 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 PADI6Q6TGC4 694 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 FAM43BQ6ZT52 329 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-230ENST00000552960 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 SCYL3Q8IZE3 742 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 FAM13CQ8NE31 585 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 HSPBP1Q9NZL4 362 aa13.1□□□□□ -0.31
HDAC7-230ENST00000552960 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 DPPA5A6NC42 116 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 NEFHP12036 1026 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 GM2AP17900 193 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 BACE1P56817 501 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 CBWD2Q8IUF1 395 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 PASD1Q8IV76 773 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 LMNTD2Q8IXW0 634 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 HAUS1Q96CS2 278 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 RNPEPL1Q9HAU8 725 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 SLC38A10Q9HBR0 1119 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 LARSQ9P2J5 1176 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 SLC16A4O15374 487 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 LGR5O75473 907 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 IFNB1P01574 187 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 CALB2P22676 271 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 PLCB3Q01970 1234 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 P3H1Q32P28 736 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 RNF43Q68DV7 783 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 GTF3C4Q9UKN8 822 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 WDR46O15213 610 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 ZSCAN5DPP0CG00 497 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 MAGEA4P43358 317 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 MFAP3P55082 362 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 RPS6P62753 249 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 GRK7Q8WTQ7 553 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 KLF6Q99612 283 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 C12orf65Q9H3J6 166 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 TUFT1Q9NNX1 390 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 UBN1Q9NPG3 1134 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 MRPL11Q9Y3B7 192 aaKnown RBP13.09□□□□□ -0.31
HDAC7-230ENST00000552960 USH1CQ9Y6N9 552 aa13.09□□□□□ -0.31
HDAC7-230ENST00000552960 LRRD1A4D1F6 860 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 FSCN2O14926 492 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 SLC26A4O43511 780 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-230ENST00000552960 LINGO3P0C6S8 592 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-230ENST00000552960 PEX3P56589 373 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 TAF1BQ53T94 588 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-230ENST00000552960 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 CLMNQ96JQ2 1002 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 SMC6Q96SB8 1091 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 SEL1LQ9UBV2 794 aa13.08□□□□□ -0.32
HDAC7-230ENST00000552960 CORO1CQ9ULV4 474 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms