RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PSMC4P43686 418 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 MTERF2Q49AM1 385 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 WDR44Q5JSH3 913 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 FAM83AQ86UY5 434 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 RHOT1Q8IXI2 618 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 CCDC89Q8N998 374 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 ANKLE1Q8NAG6 615 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 HAUS1Q96CS2 278 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 FAM81BQ96LP2 452 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 PDLIM7Q9NR12 457 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 PCDHB4Q9Y5E5 795 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 NQO1P15559 274 aaKnown RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 ATF7P17544 494 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 GARTP22102 1010 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 MAGEA4P43358 317 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 WDR4P57081 412 aaKnown RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 PRKCEQ02156 737 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 BNIP1Q12981 228 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 TXNRD3NBQ6F5E7 133 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 GIMAP7Q8NHV1 300 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 N4BP2L2Q92802 583 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-217ENST00000495688 CYP26B1Q9NR63 512 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 RNF146Q9NTX7 359 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 ARHGAP28Q9P2N2 729 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 PRKAG3Q9UGI9 489 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 STK38LQ9Y2H1 464 aa13.81□□□□□ -0.2
PTPN7-217ENST00000495688 EXTL3O43909 919 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 MYBL1P10243 752 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 EZRP15311 586 aaKnown RBP13.8□□□□□ -0.2
PTPN7-217ENST00000495688 KCNA2P16389 499 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 GCAP28676 217 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 COPS2P61201 443 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 CUL2Q13617 745 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 KIRREL3Q8IZU9 778 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 OR5B17Q8NGF7 314 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-217ENST00000495688 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-217ENST00000495688 LPAR1Q92633 364 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 KLHL29Q96CT2 875 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 SAYSD1Q9NPB0 183 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 EURLQ9NYK6 297 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 ARL2BPQ9Y2Y0 163 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 NUB1Q9Y5A7 615 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
PTPN7-217ENST00000495688 TCEA3O75764 348 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 PIAS1O75925 651 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 EDN1P05305 212 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 TAC1P20366 129 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 SLC8A1P32418 973 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 CAV1Q03135 178 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 PTP4A2Q12974 167 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 FKBP1CQ5VVH2 108 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 KATNAL2Q8IYT4 538 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 ABRAQ8N0Z2 381 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 AGAP11Q8TF27 550 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 LGALS13Q9UHV8 139 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 AGO2Q9UKV8 859 aaKnown RBP13.8□□□□□ -0.2
PTPN7-217ENST00000495688 PSME4Q14997 1843 aa13.8□□□□□ -0.2
PTPN7-217ENST00000495688 POC1B-GALNT4F8VUJ3 575 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 VWA5AO00534 786 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 PSTPIP1O43586 416 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 BANF1O75531 89 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 DGAT1O75907 488 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ZNF268Q14587 947 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 PSMD6Q15008 389 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 MFSD7Q6UXD7 560 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ZNF677Q86XU0 584 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 RBBP8NLQ8NC74 664 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 MAML1Q92585 1016 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ATP6V0A1Q93050 837 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 TRIM11Q96F44 468 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 PDGFDQ9GZP0 370 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 SLCO1B3Q9NPD5 702 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 NKIRAS1Q9NYS0 192 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 FZD1Q9UP38 647 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ZNF148Q9UQR1 794 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 EXOC1LA0A1B0GW35 172 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 F8VP50 259 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ZBED4O75132 1171 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ELF1P32519 619 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 CLDN10P78369 228 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 DNAJC3Q13217 504 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms