RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 R3HCC1Q9Y3T6 440 aaKnown RBP12.76□□□□□ -0.37
HSPG2-206ENST00000439717 XIRP2A4UGR9 3374 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 MYO7AQ13402 2215 aa12.76□□□□□ -0.37
HSPG2-206ENST00000439717 GLUD1P00367 558 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 DLATP10515 647 aaKnown RBP12.75□□□□□ -0.37
HSPG2-206ENST00000439717 ODC1P11926 461 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 EPCAMP16422 314 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 TNNI1P19237 187 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 TYMPP19971 482 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
HSPG2-206ENST00000439717 CLDN10P78369 228 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 LRRC63Q05C16 580 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 PTPRJQ12913 1337 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 ADAM9Q13443 819 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 SMAD4Q13485 552 aaKnown RBP12.75□□□□□ -0.37
HSPG2-206ENST00000439717 RAB33AQ14088 237 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 TJAP1Q5JTD0 557 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 ISM2Q6H9L7 571 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 USP37Q86T82 979 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 OR5B17Q8NGF7 314 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-206ENST00000439717 CXorf38Q8TB03 319 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 PARD3BQ8TEW8 1205 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 SENP8Q96LD8 212 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 MKNK1Q9BUB5 465 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 DSEQ9UL01 958 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 AGAP1Q9UPQ3 857 aa12.75□□□□□ -0.37
HSPG2-206ENST00000439717 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 CETN3O15182 167 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 SPTLC1O15269 473 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 TGM5O43548 720 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 OAZ2O95190 189 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 CYP11A1P05108 521 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 KRT19P08727 400 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 RPL17P18621 184 aaKnown RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 BMP6P22004 513 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 CCNE1P24864 410 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 PSMC2P35998 433 aaKnown RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 CASP4P49662 377 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 RBM10P98175 930 aaKnown RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 FKBP3Q00688 224 aaKnown RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 YWHAHQ04917 246 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 LMBRD2Q68DH5 695 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 SLC8B1Q6J4K2 584 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 LILRA6Q6PI73 481 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 INTS8Q75QN2 995 aaKnown RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 PALB2Q86YC2 1186 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 ZC3H3Q8IXZ2 948 aaKnown RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 SMRP1Q8NCR6 262 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 BORCS6Q96GS4 357 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
HSPG2-206ENST00000439717 NUP62CLQ9H1M0 184 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 PLEKHA4Q9H4M7 779 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 SFXN1Q9H9B4 322 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
HSPG2-206ENST00000439717 VWA8A3KMH1 1905 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-206ENST00000439717 PPP1R3GB7ZBB8 358 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 BIN1O00499 593 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 CYB561D2O14569 222 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 IKBKBO14920 756 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 MBTPS2O43462 519 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 AKAP3O75969 853 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 BMP1P13497 986 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 KRT13P13646 458 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 OR1D2P34982 312 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-206ENST00000439717 ITIH3Q06033 890 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 CTXN3Q4LDR2 81 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 OVOS1Q6IE37 1185 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 SYCE2Q6PIF2 218 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 CYP26C1Q6V0L0 522 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 RTL10Q7L3V2 364 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 FAM186BQ8IYM0 893 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
HSPG2-206ENST00000439717 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 FBXL5Q9UKA1 691 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 CDY1Q9Y6F8 540 aa12.73□□□□□ -0.37
HSPG2-206ENST00000439717 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
HSPG2-206ENST00000439717 BICDL2A1A5D9 508 aa12.72□□□□□ -0.37
HSPG2-206ENST00000439717 OR6C75A6NL08 312 aa12.72□□□□□ -0.37
HSPG2-206ENST00000439717 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
HSPG2-206ENST00000439717 SLC16A3O15427 465 aaKnown RBP12.72□□□□□ -0.37
HSPG2-206ENST00000439717 ADAM12O43184 909 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms