RNA–Protein interactions for RNA: ENST00000384559.1

RNU6-1235P-201, Transcript of RNA, U6 small nuclear 1235, pseudogene, humanhuman

BASIC

Gene RNU6-1235P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1235P-201ENST00000384559 FGFR4P22455 802 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 NR4A1P22736 598 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 MGAT1P26572 445 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 SLC7A1P30825 629 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 NEK3P51956 506 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 ZNF135P52742 658 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 GNAI1P63096 354 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 FAM193AP78312 1265 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 HSD11B2P80365 405 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 OCA2Q04671 838 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 SEMA5AQ13591 1074 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 KIF22Q14807 665 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 ATP2B3Q16720 1220 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 NRN1LQ496H8 165 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 RNF220Q5VTB9 566 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 AGAP9Q5VTM2 703 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 ERICH6BQ5W0A0 696 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 GDF7Q7Z4P5 450 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 SRGAP1Q7Z6B7 1085 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 PRRT2Q7Z6L0 340 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 TMPRSS6Q8IU80 811 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 RHOT2Q8IXI1 618 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 SLC17A8Q8NDX2 589 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 NLGN4YQ8NFZ3 816 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 PARD3BQ8TEW8 1205 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 FBXO41Q8TF61 875 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 MAML1Q92585 1016 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 DVL3Q92997 716 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 MTFMTQ96DP5 389 aaKnown RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 TINAGL1Q9GZM7 467 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 BRD9Q9H8M2 597 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 RSAD1Q9HA92 442 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 SARS2Q9NP81 518 aaKnown RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 KLHL11Q9NVR0 708 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 SIDT1Q9NXL6 827 aaKnown RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 FAM30AQ9NZY2 134 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 CPNE7Q9UBL6 633 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 CNOT11Q9UKZ1 510 aaKnown RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 CLCA2Q9UQC9 943 aa2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.55□□□□□ -2
RNU6-1235P-201ENST00000384559 TMEM233B4DJY2 109 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 MYO1FO00160 1098 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 GOLIM4O00461 696 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 TRIM24O15164 1050 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 LPXNO60711 386 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 NCR1O76036 304 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 UNC5CO95185 931 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 MAP4K4O95819 1239 aaPredicted RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 HRGP04196 525 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 MYL1P05976 194 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 CKBP12277 381 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 MYF5P13349 255 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 PIK3CBP42338 1070 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 KCNJ5P48544 419 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 CACNB3P54284 484 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SUMO3P55854 103 aaPredicted RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 GPSM2P81274 684 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 PURAQ00577 322 aaKnown RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 MC2RQ01718 297 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 BOP1Q14137 746 aaKnown RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 POLD3Q15054 466 aaPredicted RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SAFBQ15424 915 aaKnown RBP eCLIP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SPATS1Q496A3 300 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 RABL3Q5HYI8 236 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SYCP2LQ5T4T6 812 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 EMC10Q5UCC4 262 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 CCSAPQ6IQ19 270 aaPredicted RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 DARS2Q6PI48 645 aaKnown RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SLC30A10Q6XR72 485 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 RNF207Q6ZRF8 634 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SESTD1Q86VW0 696 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 C1orf210Q8IVY1 113 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 FAM43AQ8N2R8 423 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 FAM46DQ8NEK8 389 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 PJA1Q8NG27 643 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 ZNF483Q8TF39 744 aaPredicted RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 NUP133Q8WUM0 1156 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 ANKS1AQ92625 1134 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 TTC17Q96AE7 1141 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 LRIG1Q96JA1 1093 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 TRIM54Q9BYV2 358 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SMURF2Q9HAU4 748 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 GPR35Q9HC97 309 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 CNNM1Q9NRU3 951 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 GNL3LQ9NVN8 582 aaKnown RBP2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 STK32BQ9NY57 414 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 ETAA1Q9NY74 926 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 CFAP97Q9P2B7 532 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 SRRDQ9UH36 339 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 ZDHHC8Q9ULC8 765 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 CORO2BQ9UQ03 480 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 TSC22D4Q9Y3Q8 395 aa2.54□□□□□ -2
RNU6-1235P-201ENST00000384559 A0A1B0GTW7 788 aa2.53□□□□□ -2
RNU6-1235P-201ENST00000384559 UNC119BA6NIH7 251 aa2.53□□□□□ -2
RNU6-1235P-201ENST00000384559 F8W8V4 182 aa2.53□□□□□ -2
RNU6-1235P-201ENST00000384559 DCLK1O15075 740 aa2.53□□□□□ -2
RNU6-1235P-201ENST00000384559 VPS4BO75351 444 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms