RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 LRRFIP1Q32MZ4 808 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TUBB8Q3ZCM7 444 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 LEXMQ3ZCV2 418 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 MAP3K21Q5TCX8 1036 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 RNF43Q68DV7 783 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 HEATR6Q6AI08 1181 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TATDN1Q6P1N9 297 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 DSTYKQ6XUX3 929 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC39A5Q6ZMH5 540 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC81Q6ZN84 652 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 GK5Q6ZS86 529 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 BMP8AQ7Z5Y6 402 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SRGAP1Q7Z6B7 1085 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NLRP14Q86W24 1093 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 IQCA1Q86XH1 822 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 MRPL41Q8IXM3 137 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CARNMT1Q8N4J0 409 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 DEPTORQ8TB45 409 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 ARNTL2Q8WYA1 636 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CELF1Q92879 486 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC138Q96M89 665 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TSGA13Q96PP4 275 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 NUP88Q99567 741 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 BARD1Q99728 777 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 DHRS4Q9BTZ2 278 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CRB3Q9BUF7 120 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 KATNAL1Q9BW62 490 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 FOXQ1Q9C009 403 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 WDR12Q9GZL7 423 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 ZMAT5Q9UDW3 170 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TJP2Q9UDY2 1190 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 DDX20Q9UHI6 824 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 ZBTB21Q9ULJ3 1066 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 CORINQ9Y5Q5 1042 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 SQORQ9Y6N5 450 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 HEG1Q9ULI3 1381 aa3.89□□□□□ -1.79
ECHDC1-205ENST00000368295 TRIM75PA6NK02 468 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 C2orf81A6NN90 581 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 BOLA2-SMG1P6H3BVE0 249 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 MUSKO15146 869 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 USO1O60763 962 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 MAFO75444 373 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 DDAH1O94760 285 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 IGLV1-40P01703 118 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ASGR2P07307 311 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 RAG1P15918 1043 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 RHCEP18577 417 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 CCNFP41002 786 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 RECQLP46063 649 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 YARSP54577 528 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 RHDQ02161 417 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 CLCQ05315 142 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GRB10Q13322 594 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GRAPQ13588 217 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 RAB30Q15771 203 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 CLUL1Q15846 466 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC10A6Q3KNW5 377 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 C5orf22Q49AR2 442 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 HERC4Q5GLZ8 1057 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GALNT17Q6IS24 598 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 CNSTQ6PJW8 725 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SEZ6L2Q6UXD5 910 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF365Q70YC5 407 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 BEND5Q7L4P6 421 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 UBE3DQ7Z6J8 389 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GALNT13Q8IUC8 556 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SLFN12Q8IYM2 578 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 NRSN1Q8IZ57 195 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 LRRC47Q8N1G4 583 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 CPA6Q8N4T0 437 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ANKRD13CQ8N6S4 541 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 FAM13CQ8NE31 585 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 LILRB1Q8NHL6 650 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC30A5Q8TAD4 765 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GRAPLQ8TC17 118 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 MGARPQ8TDB4 240 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SSH3Q8TE77 659 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ACSF2Q96CM8 615 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ZBED3Q96IU2 234 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SPATA17Q96L03 361 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 TTC1Q99614 292 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 DBNDD2Q9BQY9 259 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GTPBP4Q9BZE4 634 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 NYXQ9GZU5 481 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ARFGAP3Q9NP61 516 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNHIT6Q9NWK9 470 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 PPT2Q9UMR5 302 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 DUSP12Q9UNI6 340 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 MTF2Q9Y483 593 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 SPTA1P02549 2419 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 DSPP15924 2871 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 IL16Q14005 1332 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 GBF1Q92538 1859 aa3.88□□□□□ -1.79
ECHDC1-205ENST00000368295 HMX2A2RU54 273 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 MEIS3P2A8K0S8 358 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 B4DLN1 442 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 B4E171 279 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 F5H0A9 414 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 EYA2O00167 538 aa3.87□□□□□ -1.79
ECHDC1-205ENST00000368295 TAF4O00268 1085 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms