RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 AGLP35573 1532 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 RASGRF2O14827 1237 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 POLR1CO15160 346 aaPredicted RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 SULT1C4O75897 302 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 ATF6P18850 670 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 NUDT1P36639 197 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 TRADDQ15628 312 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 PCGF5Q86SE9 256 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 LRRC6Q86X45 466 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MARVELD2Q8N4S9 558 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 RFWD2Q8NHY2 731 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MGARPQ8TDB4 240 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 ACTRT2Q8TDY3 377 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 RNF41Q9H4P4 317 aaPredicted RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 ZNF696Q9H7X3 374 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MLXIPQ9HAP2 919 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 TAB2Q9NYJ8 693 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 GABBR1Q9UBS5 961 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 UBA2Q9UBT2 640 aaPredicted RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 WASF2Q9Y6W5 498 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MADDQ8WXG6 1647 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 MUSKO15146 869 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 CTDNEP1O95476 244 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 PPP1R2P41236 205 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 IFI35P80217 286 aaPredicted RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 IL9RQ01113 521 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 SMARCB1Q12824 385 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 NPTX1Q15818 432 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 LONRF1Q17RB8 773 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 TCP11X2Q5H9J9 407 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 PPP1R2P3Q6NXS1 205 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 PRR23CQ6ZRP0 262 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MB21D1Q8N884 522 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 C7orf57Q8NEG2 295 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 ZNF274Q96GC6 653 aaPredicted RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 MTMR12Q9C0I1 747 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 IFT22Q9H7X7 185 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 KCNJ18B7U540 433 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 PJA2O43164 708 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 SCO2O43819 266 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 EXOC3O60645 756 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 SURF6O75683 361 aaKnown RBP9.05□□□□□ -0.96
TDP1-201ENST00000335725 OR5F1O95221 314 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 EGFRP00533 1210 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 RARGP13631 454 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 CASP5P51878 434 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 CYP27A1Q02318 531 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 KCNJ12Q14500 433 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 CLVS2Q5SYC1 327 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 KLHDC7AQ5VTJ3 777 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 MFSD5Q6N075 450 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 STOX1Q6ZVD7 989 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 TTC9Q92623 222 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 SERPINB12Q96P63 405 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 SEPT3Q9UH03 358 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 ADGRB3O60242 1522 aa9.05□□□□□ -0.96
TDP1-201ENST00000335725 TMEM120BA0PK00 339 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 ARHGEF35A5YM69 484 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 ATMINO43313 823 aaPredicted RBP9.04□□□□□ -0.96
TDP1-201ENST00000335725 NCK2O43639 380 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 CBX6O95503 412 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 PCNAP12004 261 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 PRKCAP17252 672 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 RRM1P23921 792 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 WEE1P30291 646 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 SLC5A3P53794 718 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 OCA2Q04671 838 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 LRRC14Q15048 493 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 SLX4IPQ5VYV7 408 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 AGMOQ6ZNB7 445 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 AADATQ8N5Z0 425 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 SLC22A8Q8TCC7 542 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 SAMD11Q96NU1 681 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 TNFRSF10DQ9UBN6 386 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 RIMKLBQ9ULI2 386 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 PCDHGA8Q9Y5G5 932 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 CFAP99D6REC4 459 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 GFAPP14136 432 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 MAGEA1P43355 309 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 DNM2P50570 870 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 FKBP4Q02790 459 aaKnown RBP eCLIP9.04□□□□□ -0.96
TDP1-201ENST00000335725 PPP2R5EQ16537 467 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 ZNF658Q5TYW1 1059 aaPredicted RBP9.04□□□□□ -0.96
TDP1-201ENST00000335725 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 METTL25Q8N6Q8 603 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 NGDNQ8NEJ9 315 aaKnown RBP9.04□□□□□ -0.96
TDP1-201ENST00000335725 SPATA20Q8TB22 786 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 ZNF398Q8TD17 642 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 EPS8L3Q8TE67 593 aaKnown RBP9.04□□□□□ -0.96
TDP1-201ENST00000335725 ESR2Q92731 530 aa9.04□□□□□ -0.96
TDP1-201ENST00000335725 MXD3Q9BW11 206 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms