RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 TTC4O95801 387 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 PRKCBP05771 671 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 CA4P22748 312 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 MSH2P43246 934 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 RNASELQ05823 741 aaKnown RBP10.64□□□□□ -0.71
HMGCR-201ENST00000287936 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
HMGCR-201ENST00000287936 MXD4Q14582 209 aaPredicted RBP10.64□□□□□ -0.71
HMGCR-201ENST00000287936 KLHL38Q2WGJ6 581 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ZNF568Q3ZCX4 644 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ZNF394Q53GI3 561 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ERMARDQ5T6L9 678 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 KCNV1Q6PIU1 500 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 SPATA21Q7Z572 469 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 THNSL1Q8IYQ7 743 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 SLC40A1Q9NP59 571 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 WDR35Q9P2L0 1181 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
HMGCR-201ENST00000287936 COQ4Q9Y3A0 265 aa10.64□□□□□ -0.71
HMGCR-201ENST00000287936 HGSO14964 777 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 GSTA1P08263 222 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 MAGEA4P43358 317 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 DYNLT1P63172 113 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 TNFAIP2Q03169 654 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ADCY1Q08828 1119 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 EMC10Q5UCC4 262 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 TRPM8Q7Z2W7 1104 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 CNPY4Q8N129 248 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SEMA4DQ92854 862 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 FIZ1Q96SL8 496 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ZNF518BQ9C0D4 1074 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 TMEM51Q9NW97 253 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 GAS2O43903 313 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ATP5HO75947 161 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 LSM8O95777 96 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SOX10P56693 466 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 IER5Q5VY09 327 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ANO5Q75V66 913 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SUGP1Q8IWZ8 645 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 C12orf50Q8NA57 414 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ZWILCHQ9H900 591 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SCAF8Q9UPN6 1271 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SMG5Q9UPR3 1016 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 DHX15O43143 795 aaKnown RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 CCNE2O96020 404 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 COPS2P61201 443 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 TBC1D1Q86TI0 1168 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-201ENST00000287936 C9orf72Q96LT7 481 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 TMEM109Q9BVC6 243 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 IFT122Q9HBG6 1241 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 STK38LQ9Y2H1 464 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 NEU2Q9Y3R4 380 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 PPME1Q9Y570 386 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 PI4K2BG5E9Z4 385 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 H7C0C1 242 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SHBGP04278 402 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 CHRNB2P17787 502 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 PTGIRP43119 386 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ATP5OP48047 213 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 TFDP2Q14188 446 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ATP11CQ8NB49 1132 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 DNERQ8NFT8 737 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 MCEEQ96PE7 176 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 HAUS2Q9NVX0 235 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 ASNSD1Q9NWL6 643 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 NENFQ9UMX5 172 aa10.63□□□□□ -0.71
HMGCR-201ENST00000287936 SMAPO00193 183 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 PAEPP09466 180 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 PSMC1P62191 440 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 CYP1B1Q16678 543 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 ANKRD20A8PQ5CZ79 823 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 KATNAL2Q8IYT4 538 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 SEC14L1Q92503 715 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 TLCD1Q96CP7 247 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 NLRP4Q96MN2 994 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 ACP6Q9NPH0 428 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 HESX1Q9UBX0 185 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 I3L4J1 428 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 DCTN3O75935 186 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 INHBAP08476 426 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 MARK3P27448 753 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 SCTRP47872 440 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 PDIA2Q13087 525 aaKnown RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 CCDC6Q16204 474 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 EAPPQ56P03 285 aaPredicted RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 DCAF12L1Q5VU92 463 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 WDR49Q8IV35 697 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 TTC39CQ8N584 583 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 FRMD8P1Q9BZ68 369 aaPredicted RBP10.62□□□□□ -0.71
HMGCR-201ENST00000287936 MAF1Q9H063 256 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 MLXIPLQ9NP71 852 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 NR2E1Q9Y466 385 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 FAM47DPA6NHR8 397 aa10.62□□□□□ -0.71
HMGCR-201ENST00000287936 SSTR3P32745 418 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms