RNA–Protein interactions for RNA: YPR045C

THP3, Transcript of Protein that may have a role in transcription elongation, yeast

Gene THP3, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THP3	YPR045C	YNR021W	P53723	404 aa	Known RBP	11.2	□□□□□ -0.62
THP3	YPR045C	RGR1	P19263	1082 aa		11.19	□□□□□ -0.62
THP3	YPR045C	MVP1	P40959	511 aa	Known RBP	11.19	□□□□□ -0.62
THP3	YPR045C	SPT23	P35210	1082 aa		11.18	□□□□□ -0.62
THP3	YPR045C	DOT5	P40553	215 aa		11.18	□□□□□ -0.62
THP3	YPR045C	ROM2	P51862	1356 aa	Known RBP	11.18	□□□□□ -0.62
THP3	YPR045C	AUS1	Q08409	1394 aa		11.17	□□□□□ -0.62
THP3	YPR045C	BNI4	P53858	892 aa		11.17	□□□□□ -0.62
THP3	YPR045C	TAP42	Q04372	366 aa		11.17	□□□□□ -0.62
THP3	YPR045C	HIM1	Q06674	414 aa		11.17	□□□□□ -0.62
THP3	YPR045C	GRX4	P32642	244 aa		11.16	□□□□□ -0.62
THP3	YPR045C	YKL133C	P36066	463 aa		11.16	□□□□□ -0.62
THP3	YPR045C	RPN11	P43588	306 aa	Known RBP	11.16	□□□□□ -0.62
THP3	YPR045C	TUM1	Q08686	304 aa	Known RBP	11.16	□□□□□ -0.62
THP3	YPR045C	FOX2	Q02207	900 aa	Known RBP	11.15	□□□□□ -0.62
THP3	YPR045C	YRR1	Q12172	810 aa		11.15	□□□□□ -0.62
THP3	YPR045C	KAR2	P16474	682 aa	Known RBP	11.14	□□□□□ -0.63
THP3	YPR045C	SEC3	P33332	1336 aa	Known RBP	11.13	□□□□□ -0.63
THP3	YPR045C	UBP1	P25037	809 aa		11.13	□□□□□ -0.63
THP3	YPR045C	GLC3	P32775	704 aa		11.13	□□□□□ -0.63
THP3	YPR045C	RPN1	P38764	993 aa	Known RBP	11.13	□□□□□ -0.63
THP3	YPR045C	ATF2	P53296	535 aa		11.12	□□□□□ -0.63
THP3	YPR045C	YPR109W	Q06104	294 aa		11.12	□□□□□ -0.63
THP3	YPR045C	PTC2	P39966	464 aa	Known RBP	11.11	□□□□□ -0.63
THP3	YPR045C	SNF2	P22082	1703 aa		11.1	□□□□□ -0.63
THP3	YPR045C	YJL181W	P46987	611 aa		11.1	□□□□□ -0.63
THP3	YPR045C	YRF1-4	O13559	1382 aa		11.1	□□□□□ -0.63
THP3	YPR045C	YEF3	P16521	1044 aa	Known RBP	11.09	□□□□□ -0.63
THP3	YPR045C	COB	P00163	385 aa		11.09	□□□□□ -0.63
THP3	YPR045C	LAM6	Q08001	693 aa		11.09	□□□□□ -0.63
THP3	YPR045C	PDR1	P12383	1068 aa		11.08	□□□□□ -0.64
THP3	YPR045C	CLB5	P30283	435 aa		11.08	□□□□□ -0.64
THP3	YPR045C	PAP2	P53632	584 aa	Known RBP	11.08	□□□□□ -0.64
THP3	YPR045C	SIR4	P11978	1358 aa		11.08	□□□□□ -0.64
THP3	YPR045C	TRK1	P12685	1235 aa		11.07	□□□□□ -0.64
THP3	YPR045C	PRP40	P33203	583 aa	Known RBP	11.07	□□□□□ -0.64
THP3	YPR045C	TEA1	P47988	759 aa		11.07	□□□□□ -0.64
THP3	YPR045C	MEC3	Q02574	474 aa		11.07	□□□□□ -0.64
THP3	YPR045C	FRK1	Q03002	865 aa	Predicted RBP	11.07	□□□□□ -0.64
THP3	YPR045C	RPO41	P13433	1351 aa	Known RBP	11.06	□□□□□ -0.64
THP3	YPR045C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.06	□□□□□ -0.64	not detected
THP3	YPR045C	ADE16	P54113	591 aa	Known RBP	11.05	□□□□□ -0.64
THP3	YPR045C	AIM7	Q12156	149 aa		11.05	□□□□□ -0.64
THP3	YPR045C	EDE1	P34216	1381 aa		11.04	□□□□□ -0.64
THP3	YPR045C	NPR2	P39923	615 aa		11.04	□□□□□ -0.64
THP3	YPR045C	RIM15	P43565	1770 aa		11.04	□□□□□ -0.64
THP3	YPR045C	YKR075C	P36155	307 aa		11.03	□□□□□ -0.64
THP3	YPR045C	YML082W	Q04533	649 aa	Known RBP	11.03	□□□□□ -0.64
THP3	YPR045C	LYS4	P49367	693 aa	Predicted RBP	11.01	□□□□□ -0.65
THP3	YPR045C	ATG13	Q06628	738 aa		11.01	□□□□□ -0.65
THP3	YPR045C	RAM1	P22007	431 aa		11	□□□□□ -0.65
THP3	YPR045C	HSP104	P31539	908 aa	Known RBP	11	□□□□□ -0.65
THP3	YPR045C	NUD1	P32336	851 aa		11	□□□□□ -0.65
THP3	YPR045C	YBL086C	P38177	466 aa		11	□□□□□ -0.65
THP3	YPR045C	SPT7	P35177	1332 aa		10.99	□□□□□ -0.65
THP3	YPR045C	LEO1	P38439	464 aa		10.99	□□□□□ -0.65
THP3	YPR045C	DSD1	P53095	428 aa		10.99	□□□□□ -0.65
THP3	YPR045C	NPL4	P33755	580 aa		10.98	□□□□□ -0.65
THP3	YPR045C	VRP1	P37370	817 aa		10.98	□□□□□ -0.65
THP3	YPR045C	BCK2	P33306	851 aa		10.97	□□□□□ -0.65
THP3	YPR045C	AKL1	P38080	1108 aa	Known RBP	10.97	□□□□□ -0.65
THP3	YPR045C	INP54	Q08227	384 aa	Known RBP	10.97	□□□□□ -0.65
THP3	YPR045C	YPR015C	Q12531	247 aa		10.96	□□□□□ -0.65
THP3	YPR045C	KIN1	P13185	1064 aa		10.94	□□□□□ -0.66
THP3	YPR045C	OSM1	P21375	501 aa	Known RBP	10.94	□□□□□ -0.66
THP3	YPR045C	ALD2	P47771	506 aa		10.94	□□□□□ -0.66
THP3	YPR045C	UGA2	P38067	497 aa		10.93	□□□□□ -0.66
THP3	YPR045C	NUP145	P49687	1317 aa		10.93	□□□□□ -0.66
THP3	YPR045C	STR2	P47164	639 aa		10.92	□□□□□ -0.66
THP3	YPR045C	RRP46	P53256	223 aa	Predicted RBP	10.92	□□□□□ -0.66
THP3	YPR045C	SSA2	P10592	639 aa	Known RBP	10.92	□□□□□ -0.66
THP3	YPR045C	ISM1	P48526	1002 aa		10.92	□□□□□ -0.66
THP3	YPR045C	NIS1	P53939	407 aa		10.92	□□□□□ -0.66
THP3	YPR045C	CTF4	Q01454	927 aa		10.92	□□□□□ -0.66
THP3	YPR045C	CTH1	P47976	325 aa		10.91	□□□□□ -0.66
THP3	YPR045C	YBP2	P53169	641 aa		10.91	□□□□□ -0.66
THP3	YPR045C	AOS1	Q06624	347 aa		10.91	□□□□□ -0.66
THP3	YPR045C	RTR1	P40084	226 aa	Predicted RBP	10.89	□□□□□ -0.67
THP3	YPR045C	GRX1	P25373	110 aa	Known RBP	10.88	□□□□□ -0.67
THP3	YPR045C	BUD20	Q08004	166 aa	Predicted RBP	10.88	□□□□□ -0.67
THP3	YPR045C	GCD11	P32481	527 aa	Known RBP	10.86	□□□□□ -0.67
THP3	YPR045C	NTH2	P35172	780 aa		10.86	□□□□□ -0.67
THP3	YPR045C	FPK1	P53739	893 aa		10.86	□□□□□ -0.67
THP3	YPR045C	KEX2	P13134	814 aa		10.85	□□□□□ -0.67
THP3	YPR045C	GYP1	Q08484	637 aa		10.85	□□□□□ -0.67
THP3	YPR045C	SIT4	P20604	311 aa		10.84	□□□□□ -0.67
THP3	YPR045C	KCC4	P25389	1037 aa		10.84	□□□□□ -0.67
THP3	YPR045C	PRT1	P06103	763 aa	Known RBP	10.84	□□□□□ -0.67
THP3	YPR045C	BUG1	Q12191	341 aa		10.84	□□□□□ -0.67
THP3	YPR045C	RAD4	P14736	754 aa		10.83	□□□□□ -0.68
THP3	YPR045C	PRD1	P25375	712 aa		10.83	□□□□□ -0.68
THP3	YPR045C	ALE1	Q08548	619 aa		10.83	□□□□□ -0.68
THP3	YPR045C	ALD3	P54114	506 aa		10.82	□□□□□ -0.68
THP3	YPR045C	RMT2	Q03305	412 aa		10.82	□□□□□ -0.68
THP3	YPR045C	XDJ1	P39102	459 aa		10.81	□□□□□ -0.68
THP3	YPR045C	MPP10	P47083	593 aa	Known RBP	10.81	□□□□□ -0.68
THP3	YPR045C	YNL115C	P53925	644 aa		10.81	□□□□□ -0.68
THP3	YPR045C	ERF2	Q06551	359 aa		10.81	□□□□□ -0.68
THP3	YPR045C	HST2	P53686	357 aa		10.8	□□□□□ -0.68
THP3	YPR045C	YNL050C	P53952	270 aa		10.8	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms