RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W SSN3P39073 555 aa6.56□□□□□ -1.36
HSH49YOR319W ATG3P40344 310 aa6.56□□□□□ -1.36
HSH49YOR319W SPT2P06843 333 aaPredicted RBP6.55□□□□□ -1.36
HSH49YOR319W BIM1P40013 344 aa6.55□□□□□ -1.36
HSH49YOR319W APL6P46682 809 aa6.55□□□□□ -1.36
HSH49YOR319W SLA1P32790 1244 aa6.54□□□□□ -1.36
HSH49YOR319W AHP1P38013 176 aaKnown RBP6.54□□□□□ -1.36
HSH49YOR319W TBS1P38114 1094 aa6.54□□□□□ -1.36
HSH49YOR319W RPL34BP40525 121 aaKnown RBP6.54□□□□□ -1.36
HSH49YOR319W YFL066CP43538 392 aa6.54□□□□□ -1.36
HSH49YOR319W SYT1Q06836 1226 aa6.54□□□□□ -1.36
HSH49YOR319W RLF2Q12495 606 aa6.54□□□□□ -1.36
HSH49YOR319W ATG32P40458 529 aa6.53□□□□□ -1.36
HSH49YOR319W KRE33P53914 1056 aaKnown RBP6.53□□□□□ -1.36
HSH49YOR319W ADE12P80210 433 aaKnown RBP6.53□□□□□ -1.36
HSH49YOR319W SOH1P38633 127 aa6.52□□□□□ -1.37
HSH49YOR319W UTP7P40055 554 aaKnown RBP6.52□□□□□ -1.37
HSH49YOR319W RIM21P48565 533 aa6.52□□□□□ -1.37
HSH49YOR319W UTP13Q05946 817 aaKnown RBP6.52□□□□□ -1.37
HSH49YOR319W TY1A-DR3Q12441 440 aa6.52□□□□□ -1.37
HSH49YOR319W TIF1P10081 395 aaKnown RBP6.51□□□□□ -1.37
HSH49YOR319W YDR461C-AQ2V2P7 80 aa6.51□□□□□ -1.37
HSH49YOR319W HAL5P38970 855 aaKnown RBP6.5□□□□□ -1.37
HSH49YOR319W ALA1P40825 983 aaKnown RBP6.5□□□□□ -1.37
HSH49YOR319W YPR053CQ6Q5F3 151 aa6.5□□□□□ -1.37
HSH49YOR319W RTG2P32608 588 aaKnown RBP6.49□□□□□ -1.37
HSH49YOR319W CCT8P47079 568 aaKnown RBP6.49□□□□□ -1.37
HSH49YOR319W SUM1P46676 1062 aa6.47□□□□□ -1.37
HSH49YOR319W ENO1P00924 437 aaKnown RBP6.46□□□□□ -1.38
HSH49YOR319W SBE2P42223 864 aaKnown RBP6.46□□□□□ -1.38
HSH49YOR319W MRX10Q05648 414 aa6.46□□□□□ -1.38
HSH49YOR319W RDS2P19541 446 aaKnown RBP6.45□□□□□ -1.38
HSH49YOR319W JJJ2P46997 583 aa6.45□□□□□ -1.38
HSH49YOR319W TDA6Q06466 467 aa6.45□□□□□ -1.38
HSH49YOR319W HDA3Q06623 655 aa6.45□□□□□ -1.38
HSH49YOR319W IRE1P32361 1115 aa6.44□□□□□ -1.38
HSH49YOR319W SLX8P40072 274 aa6.44□□□□□ -1.38
HSH49YOR319W YNR014WP53719 212 aa6.43□□□□□ -1.38
HSH49YOR319W YMR187CQ03236 431 aa6.43□□□□□ -1.38
HSH49YOR319W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
HSH49YOR319W FPS1P23900 669 aa6.42□□□□□ -1.38
HSH49YOR319W NRD1P53617 575 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38 RIP-Chip
HSH49YOR319W SKN7P38889 622 aa6.41□□□□□ -1.38
HSH49YOR319W SBP1P10080 294 aaKnown RBP6.4□□□□□ -1.38
HSH49YOR319W SHM1P37292 490 aaPredicted RBP6.4□□□□□ -1.38
HSH49YOR319W YFL034WP43564 1073 aa6.4□□□□□ -1.38
HSH49YOR319W GPM1P00950 247 aaKnown RBP6.39□□□□□ -1.39
HSH49YOR319W MRPL16P38064 232 aa6.39□□□□□ -1.39
HSH49YOR319W AIM9P40053 627 aaKnown RBP6.39□□□□□ -1.39
HSH49YOR319W PDC6P26263 563 aaKnown RBP6.37□□□□□ -1.39
HSH49YOR319W PEP12P32854 288 aa6.37□□□□□ -1.39
HSH49YOR319W SIS2P36024 562 aa6.37□□□□□ -1.39
HSH49YOR319W MCX1P38323 520 aaPredicted RBP6.37□□□□□ -1.39
HSH49YOR319W PSH1Q12161 406 aa6.37□□□□□ -1.39
HSH49YOR319W STB3Q12427 513 aa6.37□□□□□ -1.39
HSH49YOR319W SWI5P08153 709 aa6.36□□□□□ -1.39
HSH49YOR319W BOI2P39969 1040 aa6.36□□□□□ -1.39
HSH49YOR319W PDI1P17967 522 aaKnown RBP6.35□□□□□ -1.39
HSH49YOR319W KTR7P40504 517 aa6.35□□□□□ -1.39
HSH49YOR319W TSC13Q99190 310 aa6.35□□□□□ -1.39
HSH49YOR319W RPS6AP0CX37 236 aaKnown RBP6.34□□□□□ -1.39
HSH49YOR319W RPS6BP0CX38 236 aaPredicted RBP6.34□□□□□ -1.39
HSH49YOR319W NTH2P35172 780 aa6.34□□□□□ -1.39
HSH49YOR319W MET1P36150 593 aa6.34□□□□□ -1.39
HSH49YOR319W YPQ2Q06328 317 aa6.33□□□□□ -1.4
HSH49YOR319W RPS31P05759 152 aaKnown RBP6.32□□□□□ -1.4
HSH49YOR319W SPR3P41901 512 aa6.32□□□□□ -1.4
HSH49YOR319W PDC5P16467 563 aaKnown RBP6.31□□□□□ -1.4
HSH49YOR319W YCK2P23292 546 aaKnown RBP6.31□□□□□ -1.4
HSH49YOR319W PHO87P25360 923 aa6.31□□□□□ -1.4
HSH49YOR319W KNS1P32350 737 aaPredicted RBP6.31□□□□□ -1.4
HSH49YOR319W HAP4P14064 554 aa6.3□□□□□ -1.4
HSH49YOR319W TTI1P36097 1038 aa6.3□□□□□ -1.4
HSH49YOR319W YDR215CQ12240 137 aa6.3□□□□□ -1.4
HSH49YOR319W ACS2P52910 683 aaKnown RBP6.29□□□□□ -1.4
HSH49YOR319W TY1A-DR2Q03964 440 aaKnown RBP6.29□□□□□ -1.4
HSH49YOR319W RPP1AP05318 106 aaPredicted RBP6.28□□□□□ -1.4
HSH49YOR319W CYT1P07143 309 aa6.28□□□□□ -1.4
HSH49YOR319W LEU1P07264 779 aaKnown RBP6.28□□□□□ -1.4
HSH49YOR319W SLN1P39928 1220 aaPredicted RBP6.28□□□□□ -1.4
HSH49YOR319W YTA6P40328 754 aa6.28□□□□□ -1.4
HSH49YOR319W MCM1P11746 286 aa6.27□□□□□ -1.41
HSH49YOR319W GAL2P13181 574 aa6.27□□□□□ -1.41
HSH49YOR319W GAS4Q08271 471 aa6.27□□□□□ -1.41
HSH49YOR319W TGL4P36165 910 aa6.26□□□□□ -1.41
HSH49YOR319W TAT1P38085 619 aa6.25□□□□□ -1.41
HSH49YOR319W ALD2P47771 506 aa6.25□□□□□ -1.41
HSH49YOR319W YNL165WP53891 406 aa6.25□□□□□ -1.41
HSH49YOR319W GLT1Q12680 2145 aaKnown RBP6.25□□□□□ -1.41
HSH49YOR319W RGP1P16664 663 aa6.24□□□□□ -1.41
HSH49YOR319W CPS1P27614 576 aa6.24□□□□□ -1.41
HSH49YOR319W AMN1P38285 549 aaPredicted RBP6.24□□□□□ -1.41
HSH49YOR319W ECM23Q02710 187 aa6.24□□□□□ -1.41
HSH49YOR319W MCA1Q08601 432 aa6.24□□□□□ -1.41
HSH49YOR319W MSC7P38694 644 aa6.23□□□□□ -1.41
HSH49YOR319W LSB6P42951 607 aa6.23□□□□□ -1.41
HSH49YOR319W UBP1P25037 809 aa6.22□□□□□ -1.41
HSH49YOR319W MLF3P32047 452 aa6.22□□□□□ -1.41
HSH49YOR319W ROM1P53046 1155 aa6.22□□□□□ -1.41
HSH49YOR319W VAN1P23642 535 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms