RNA–Protein interactions for RNA: YMR292W

GOT1, Transcript of Homodimeric protein that is packaged into COPII vesicles, yeast

Gene GOT1, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GOT1	YMR292W	LAM6	Q08001	693 aa		4.36	□□□□□ -1.71
GOT1	YMR292W	CFT1	Q06632	1357 aa	Known RBP	4.36	□□□□□ -1.71
GOT1	YMR292W	PPH3	P32345	308 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	RRN7	P40992	514 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	BRE2	P43132	505 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	RCM1	P53972	490 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	YML133C	Q03099	1374 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	YLL067C	Q07888	1374 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	YLL066C	Q99208	1374 aa		4.35	□□□□□ -1.71
GOT1	YMR292W	FRK1	Q03002	865 aa	Predicted RBP	4.34	□□□□□ -1.71
GOT1	YMR292W	MAM3	Q12296	706 aa		4.34	□□□□□ -1.71
GOT1	YMR292W	CDC4	P07834	779 aa		4.33	□□□□□ -1.72
GOT1	YMR292W	YNR029C	P53729	429 aa	Known RBP	4.33	□□□□□ -1.72
GOT1	YMR292W	KEX2	P13134	814 aa		4.32	□□□□□ -1.72
GOT1	YMR292W	YEF3	P16521	1044 aa	Known RBP	4.32	□□□□□ -1.72
GOT1	YMR292W	NAP1	P25293	417 aa	Known RBP	4.32	□□□□□ -1.72
GOT1	YMR292W	BDP1	P46678	594 aa		4.32	□□□□□ -1.72
GOT1	YMR292W	RTF1	P53064	558 aa		4.32	□□□□□ -1.72
GOT1	YMR292W	HED1	Q03937	162 aa		4.32	□□□□□ -1.72
GOT1	YMR292W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.32	□□□□□ -1.72
GOT1	YMR292W	PRS1	P32895	427 aa	Known RBP	4.31	□□□□□ -1.72
GOT1	YMR292W	AIR1	P40507	360 aa	Known RBP	4.31	□□□□□ -1.72
GOT1	YMR292W	PSK1	P31374	1356 aa		4.3	□□□□□ -1.72
GOT1	YMR292W	CPS1	P27614	576 aa		4.3	□□□□□ -1.72
GOT1	YMR292W	DSF2	P38213	736 aa		4.3	□□□□□ -1.72
GOT1	YMR292W	CLA4	P48562	842 aa		4.3	□□□□□ -1.72
GOT1	YMR292W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
GOT1	YMR292W	IES2	P40154	320 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	THI12	P42883	340 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	THI5	P43534	340 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	THI11	P47183	340 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	TEA1	P47988	759 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	YNL115C	P53925	644 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	YPL062W	Q02781	134 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	ERF2	Q06551	359 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	THI13	Q07748	340 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	TY4B-H	P0C2J7	1802 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	TY4B-J	P47024	1803 aa		4.28	□□□□□ -1.72
GOT1	YMR292W	LEU2	P04173	364 aa	Predicted RBP	4.27	□□□□□ -1.73
GOT1	YMR292W	SCT1	P32784	759 aa		4.27	□□□□□ -1.73
GOT1	YMR292W	HIM1	Q06674	414 aa		4.27	□□□□□ -1.73
GOT1	YMR292W	AUS1	Q08409	1394 aa		4.27	□□□□□ -1.73
GOT1	YMR292W	MOD5	P07884	428 aa		4.26	□□□□□ -1.73
GOT1	YMR292W	SIT4	P20604	311 aa		4.26	□□□□□ -1.73
GOT1	YMR292W	SPB4	P25808	606 aa	Predicted RBP	4.26	□□□□□ -1.73
GOT1	YMR292W	GAR1	P28007	205 aa	Known RBP	4.26	□□□□□ -1.73
GOT1	YMR292W	PAC1	P39946	494 aa	Known RBP	4.26	□□□□□ -1.73
GOT1	YMR292W	RRP46	P53256	223 aa	Predicted RBP	4.26	□□□□□ -1.73
GOT1	YMR292W	TUB4	P53378	473 aa		4.26	□□□□□ -1.73
GOT1	YMR292W	YMR196W	Q04336	1088 aa		4.26	□□□□□ -1.73
GOT1	YMR292W	YIL177C	P40434	1758 aa		4.26	□□□□□ -1.73
GOT1	YMR292W	YJL225C	P40889	1758 aa		4.26	□□□□□ -1.73
GOT1	YMR292W	RPS24A	P0CX31	135 aa	Known RBP	4.25	□□□□□ -1.73
GOT1	YMR292W	RPS24B	P0CX32	135 aa	Known RBP	4.25	□□□□□ -1.73
GOT1	YMR292W	DMA1	P38823	416 aa		4.25	□□□□□ -1.73
GOT1	YMR292W	KXD1	P53158	218 aa		4.25	□□□□□ -1.73
GOT1	YMR292W	AGE1	Q04412	482 aa		4.25	□□□□□ -1.73
GOT1	YMR292W	ADE6	P38972	1358 aa	Known RBP	4.25	□□□□□ -1.73
GOT1	YMR292W	SNF2	P22082	1703 aa		4.24	□□□□□ -1.73
GOT1	YMR292W	CSE4	P36012	229 aa		4.24	□□□□□ -1.73
GOT1	YMR292W	FUN12	P39730	1002 aa	Known RBP	4.24	□□□□□ -1.73
GOT1	YMR292W	MTR4	P47047	1073 aa	Known RBP	4.24	□□□□□ -1.73
GOT1	YMR292W	NUP42	P49686	430 aa	Known RBP	4.24	□□□□□ -1.73
GOT1	YMR292W	PRP43	P53131	767 aa	Known RBP	4.24	□□□□□ -1.73
GOT1	YMR292W	HST3	P53687	447 aa		4.24	□□□□□ -1.73
GOT1	YMR292W	ENV9	Q08651	330 aa		4.24	□□□□□ -1.73
GOT1	YMR292W	PDI1	P17967	522 aa	Known RBP	4.23	□□□□□ -1.73
GOT1	YMR292W	AFT1	P22149	690 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	TPD3	P31383	635 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	MET22	P32179	357 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	ASH1	P34233	588 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	MPP10	P47083	593 aa	Known RBP	4.23	□□□□□ -1.73
GOT1	YMR292W	TAP42	Q04372	366 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	YDL144C	Q07589	356 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	GAS4	Q08271	471 aa		4.23	□□□□□ -1.73
GOT1	YMR292W	RRP5	Q05022	1729 aa	Known RBP	4.23	□□□□□ -1.73
GOT1	YMR292W	KAR2	P16474	682 aa	Known RBP	4.22	□□□□□ -1.73
GOT1	YMR292W	SUI2	P20459	304 aa	Known RBP	4.22	□□□□□ -1.73
GOT1	YMR292W	NOP2	P40991	618 aa	Known RBP	4.22	□□□□□ -1.73
GOT1	YMR292W	IOC4	Q04213	475 aa		4.22	□□□□□ -1.73
GOT1	YMR292W	RTR1	P40084	226 aa	Predicted RBP	4.21	□□□□□ -1.74
GOT1	YMR292W	VPS27	P40343	622 aa	Known RBP	4.21	□□□□□ -1.74
GOT1	YMR292W	NIS1	P53939	407 aa		4.21	□□□□□ -1.74
GOT1	YMR292W	YDR444W	Q04093	687 aa		4.21	□□□□□ -1.74
GOT1	YMR292W	MET32	Q12041	191 aa		4.21	□□□□□ -1.74
GOT1	YMR292W	RVB2	Q12464	471 aa	Known RBP	4.21	□□□□□ -1.74
GOT1	YMR292W	URB1	P34241	1764 aa	Known RBP	4.2	□□□□□ -1.74
GOT1	YMR292W	YRF1-2	P40105	1681 aa		4.2	□□□□□ -1.74
GOT1	YMR292W	RPP0	P05317	312 aa	Known RBP	4.2	□□□□□ -1.74
GOT1	YMR292W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
GOT1	YMR292W	HXT10	P43581	546 aa		4.2	□□□□□ -1.74
GOT1	YMR292W	SAP155	P43612	1002 aa		4.2	□□□□□ -1.74
GOT1	YMR292W	PAP2	P53632	584 aa	Known RBP	4.2	□□□□□ -1.74
GOT1	YMR292W	SYH1	Q02875	849 aa	Known RBP	4.2	□□□□□ -1.74
GOT1	YMR292W	PUS5	Q06244	254 aa		4.2	□□□□□ -1.74
GOT1	YMR292W	THI22	Q06490	572 aa		4.2	□□□□□ -1.74
GOT1	YMR292W	DIT2	P21595	489 aa		4.19	□□□□□ -1.74
GOT1	YMR292W	SLY41	P22215	453 aa		4.19	□□□□□ -1.74
GOT1	YMR292W	PRD1	P25375	712 aa		4.19	□□□□□ -1.74
GOT1	YMR292W	GRX4	P32642	244 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms