RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W UBP16Q02863 499 aa19.38■□□□□ 0.69
SCJ1YMR214W SYF1Q04048 859 aaPredicted RBP19.38■□□□□ 0.69
SCJ1YMR214W NSE3Q05541 303 aa19.38■□□□□ 0.69
SCJ1YMR214W HAT1Q12341 374 aa19.36■□□□□ 0.69
SCJ1YMR214W SRF1Q12516 437 aa19.36■□□□□ 0.69
SCJ1YMR214W CWC15Q03772 175 aaKnown RBP19.35■□□□□ 0.69
SCJ1YMR214W ARG8P18544 423 aa19.34■□□□□ 0.69
SCJ1YMR214W TIF4632P39936 914 aaKnown RBP19.34■□□□□ 0.69
SCJ1YMR214W EMP47P43555 445 aa19.33■□□□□ 0.68
SCJ1YMR214W MAC1P35192 417 aa19.31■□□□□ 0.68
SCJ1YMR214W APL2P36000 726 aaPredicted RBP19.31■□□□□ 0.68
SCJ1YMR214W FIG2P25653 1609 aa19.3■□□□□ 0.68
SCJ1YMR214W DCD1P06773 312 aa19.3■□□□□ 0.68
SCJ1YMR214W VPS64Q03944 604 aa19.3■□□□□ 0.68
SCJ1YMR214W YGR117CP53270 476 aa19.28■□□□□ 0.68
SCJ1YMR214W IOC4Q04213 475 aa19.28■□□□□ 0.68
SCJ1YMR214W TYW1Q08960 810 aaKnown RBP19.28■□□□□ 0.68
SCJ1YMR214W VPS4P52917 437 aa19.27■□□□□ 0.68
SCJ1YMR214W SSK22P25390 1331 aaPredicted RBP19.26■□□□□ 0.67
SCJ1YMR214W HPR1P17629 752 aaKnown RBP19.26■□□□□ 0.67
SCJ1YMR214W BSD2P38356 321 aa19.25■□□□□ 0.67
SCJ1YMR214W CRF1Q04930 467 aa19.24■□□□□ 0.67
SCJ1YMR214W YPR204WQ08995 1032 aa19.24■□□□□ 0.67
SCJ1YMR214W RTR1P40084 226 aaPredicted RBP19.23■□□□□ 0.67
SCJ1YMR214W SEN54Q02825 467 aaPredicted RBP19.22■□□□□ 0.67
SCJ1YMR214W YDL144CQ07589 356 aa19.21■□□□□ 0.67
SCJ1YMR214W AFG2P32794 780 aa19.2■□□□□ 0.66
SCJ1YMR214W MPP10P47083 593 aaKnown RBP19.2■□□□□ 0.66
SCJ1YMR214W YNL050CP53952 270 aa19.2■□□□□ 0.66
SCJ1YMR214W NCS6P53088 359 aa19.19■□□□□ 0.66
SCJ1YMR214W PKH1Q03407 766 aa19.19■□□□□ 0.66
SCJ1YMR214W RRG1Q12167 365 aaPredicted RBP19.19■□□□□ 0.66
SCJ1YMR214W HVG1P0CE11 249 aa19.17■□□□□ 0.66
SCJ1YMR214W PRS1P32895 427 aaKnown RBP19.17■□□□□ 0.66
SCJ1YMR214W HKR1P41809 1802 aa19.16■□□□□ 0.66
SCJ1YMR214W CSR2Q12734 1121 aa19.16■□□□□ 0.66
SCJ1YMR214W STV1P37296 890 aa19.15■□□□□ 0.66
SCJ1YMR214W ZDS2P54786 942 aa19.15■□□□□ 0.66
SCJ1YMR214W PRD1P25375 712 aa19.14■□□□□ 0.65
SCJ1YMR214W SET4P42948 560 aa19.14■□□□□ 0.65
SCJ1YMR214W PIB1Q06651 286 aa19.14■□□□□ 0.65
SCJ1YMR214W ZDS1P50111 915 aaKnown RBP19.13■□□□□ 0.65
SCJ1YMR214W THI22Q06490 572 aa19.12■□□□□ 0.65
SCJ1YMR214W RSC30P38781 883 aa19.11■□□□□ 0.65
SCJ1YMR214W RRT6P53117 311 aaPredicted RBP19.11■□□□□ 0.65
SCJ1YMR214W CST9Q06032 482 aa19.11■□□□□ 0.65
SCJ1YMR214W GAS5Q08193 484 aa19.11■□□□□ 0.65
SCJ1YMR214W LYS2P07702 1392 aa19.1■□□□□ 0.65
SCJ1YMR214W UBX2Q04228 584 aa19.1■□□□□ 0.65
SCJ1YMR214W PNT1P38969 423 aa19.09■□□□□ 0.65
SCJ1YMR214W RPP0P05317 312 aaKnown RBP19.08■□□□□ 0.64
SCJ1YMR214W PCS60P38137 543 aaKnown RBP RIP-Chip data19.08■□□□□ 0.64not detected
SCJ1YMR214W DPH6Q12429 685 aa19.08■□□□□ 0.64
SCJ1YMR214W PAM1P37304 830 aaKnown RBP19.07■□□□□ 0.64
SCJ1YMR214W KRE2P27809 442 aa19.06■□□□□ 0.64
SCJ1YMR214W GSM1P42950 618 aa19.06■□□□□ 0.64
SCJ1YMR214W YKR023WP36119 530 aaKnown RBP19.05■□□□□ 0.64
SCJ1YMR214W YBR287WP38355 427 aa19.05■□□□□ 0.64
SCJ1YMR214W YLR271WQ06152 274 aa19.05■□□□□ 0.64
SCJ1YMR214W BMS1Q08965 1183 aaKnown RBP19.05■□□□□ 0.64
SCJ1YMR214W TRP5P00931 707 aaKnown RBP19.04■□□□□ 0.64
SCJ1YMR214W CBP1P07252 654 aa19.04■□□□□ 0.64
SCJ1YMR214W SUI2P20459 304 aaKnown RBP19.04■□□□□ 0.64
SCJ1YMR214W VPS27P40343 622 aaKnown RBP19.04■□□□□ 0.64
SCJ1YMR214W COQ4O13525 335 aa19.03■□□□□ 0.64
SCJ1YMR214W MAM1P40065 302 aa19.03■□□□□ 0.64
SCJ1YMR214W RTT109Q07794 436 aa19.03■□□□□ 0.64
SCJ1YMR214W HEF3P53978 1044 aaKnown RBP19.02■□□□□ 0.64
SCJ1YMR214W APE3P37302 537 aaKnown RBP19.01■□□□□ 0.63
SCJ1YMR214W FCP1Q03254 732 aa19■□□□□ 0.63
SCJ1YMR214W CDC45Q08032 650 aa19■□□□□ 0.63
SCJ1YMR214W TPD3P31383 635 aa18.99■□□□□ 0.63
SCJ1YMR214W ICP55P40051 511 aa18.99■□□□□ 0.63
SCJ1YMR214W RPT4P53549 437 aaKnown RBP18.99■□□□□ 0.63
SCJ1YMR214W MOT2P34909 587 aaKnown RBP18.97■□□□□ 0.63
SCJ1YMR214W RVB2Q12464 471 aaKnown RBP18.96■□□□□ 0.63
SCJ1YMR214W DNM1P54861 757 aa18.95■□□□□ 0.62
SCJ1YMR214W PRP42Q03776 544 aaKnown RBP18.95■□□□□ 0.62
SCJ1YMR214W RBA50Q04418 439 aa18.94■□□□□ 0.62
SCJ1YMR214W YOL057WQ08225 711 aa18.94■□□□□ 0.62
SCJ1YMR214W GSC2P40989 1895 aa18.88■□□□□ 0.61
SCJ1YMR214W MGM1P32266 881 aa18.88■□□□□ 0.61
SCJ1YMR214W NGR1P32831 672 aaKnown RBP18.88■□□□□ 0.61
SCJ1YMR214W SPL2P38839 148 aa18.88■□□□□ 0.61
SCJ1YMR214W JIP4Q03361 876 aa18.88■□□□□ 0.61
SCJ1YMR214W FLO11P08640 1367 aa18.87■□□□□ 0.61
SCJ1YMR214W THI3Q07471 609 aa18.87■□□□□ 0.61
SCJ1YMR214W GAL2P13181 574 aa18.86■□□□□ 0.61
SCJ1YMR214W CST6P40535 587 aa18.86■□□□□ 0.61
SCJ1YMR214W SWI1P09547 1314 aa18.85■□□□□ 0.61
SCJ1YMR214W GYP7P48365 746 aa18.85■□□□□ 0.61
SCJ1YMR214W SGD1Q06132 899 aa18.85■□□□□ 0.61
SCJ1YMR214W FUN12P39730 1002 aaKnown RBP18.84■□□□□ 0.61
SCJ1YMR214W RPS7AP26786 190 aaKnown RBP18.83■□□□□ 0.6
SCJ1YMR214W NUP133P36161 1157 aa18.83■□□□□ 0.6
SCJ1YMR214W NIT1P40447 199 aa18.83■□□□□ 0.6
SCJ1YMR214W MAL31P38156 614 aa18.82■□□□□ 0.6
SCJ1YMR214W ITC1P53125 1264 aa18.8■□□□□ 0.6
SCJ1YMR214W SRC1Q03707 834 aa18.8■□□□□ 0.6
SCJ1YMR214W ACK1Q07622 623 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms