RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W LYS5P50113 272 aa7.83□□□□□ -1.16
CSM3YMR048W DPH6Q12429 685 aa7.83□□□□□ -1.16
CSM3YMR048W ENO1P00924 437 aaKnown RBP7.82□□□□□ -1.16
CSM3YMR048W SLA1P32790 1244 aa7.82□□□□□ -1.16
CSM3YMR048W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
CSM3YMR048W AHP1P38013 176 aaKnown RBP7.81□□□□□ -1.16
CSM3YMR048W UTP7P40055 554 aaKnown RBP7.81□□□□□ -1.16
CSM3YMR048W YFL034WP43564 1073 aa7.81□□□□□ -1.16
CSM3YMR048W AIM9P40053 627 aaKnown RBP7.78□□□□□ -1.16
CSM3YMR048W ALA1P40825 983 aaKnown RBP7.78□□□□□ -1.16
CSM3YMR048W YPR204WQ08995 1032 aa7.78□□□□□ -1.16
CSM3YMR048W PEP12P32854 288 aa7.77□□□□□ -1.17
CSM3YMR048W CUZ1P53899 274 aa7.77□□□□□ -1.17
CSM3YMR048W SWI5P08153 709 aa7.76□□□□□ -1.17
CSM3YMR048W SIS2P36024 562 aa7.76□□□□□ -1.17
CSM3YMR048W JJJ3P47138 172 aa7.76□□□□□ -1.17
CSM3YMR048W TY1A-DR3Q12441 440 aa7.76□□□□□ -1.17
CSM3YMR048W JJJ2P46997 583 aa7.75□□□□□ -1.17
CSM3YMR048W TSC13Q99190 310 aa7.75□□□□□ -1.17
CSM3YMR048W DMA2P53924 522 aa7.74□□□□□ -1.17
CSM3YMR048W YPQ2Q06328 317 aa7.74□□□□□ -1.17
CSM3YMR048W DIT1P21623 536 aa7.73□□□□□ -1.17
CSM3YMR048W IRE1P32361 1115 aa7.73□□□□□ -1.17
CSM3YMR048W CEM1P39525 442 aa7.73□□□□□ -1.17
CSM3YMR048W YMR265CQ03508 461 aaKnown RBP7.73□□□□□ -1.17
CSM3YMR048W RPS6AP0CX37 236 aaKnown RBP7.72□□□□□ -1.17
CSM3YMR048W RPS6BP0CX38 236 aaPredicted RBP7.72□□□□□ -1.17
CSM3YMR048W NTH2P35172 780 aa7.71□□□□□ -1.18
CSM3YMR048W MCM1P11746 286 aa7.7□□□□□ -1.18
CSM3YMR048W PDI1P17967 522 aaKnown RBP7.7□□□□□ -1.18
CSM3YMR048W YDR461C-AQ2V2P7 80 aa7.7□□□□□ -1.18
CSM3YMR048W SHM1P37292 490 aaPredicted RBP7.69□□□□□ -1.18
CSM3YMR048W SYT1Q06836 1226 aa7.69□□□□□ -1.18
CSM3YMR048W KRE33P53914 1056 aaKnown RBP7.68□□□□□ -1.18
CSM3YMR048W PHO87P25360 923 aa7.67□□□□□ -1.18
CSM3YMR048W HAP4P14064 554 aa7.66□□□□□ -1.18
CSM3YMR048W PDC6P26263 563 aaKnown RBP7.66□□□□□ -1.18
CSM3YMR048W ADE12P80210 433 aaKnown RBP7.66□□□□□ -1.18
CSM3YMR048W PSH1Q12161 406 aa7.66□□□□□ -1.18
CSM3YMR048W RPS31P05759 152 aaKnown RBP7.65□□□□□ -1.18
CSM3YMR048W CYT1P07143 309 aa7.65□□□□□ -1.18
CSM3YMR048W ICP55P40051 511 aa7.65□□□□□ -1.18
CSM3YMR048W KTR7P40504 517 aa7.64□□□□□ -1.19
CSM3YMR048W ACS2P52910 683 aaKnown RBP7.64□□□□□ -1.19
CSM3YMR048W MTC5Q03897 1148 aa7.64□□□□□ -1.19
CSM3YMR048W GAS4Q08271 471 aa7.64□□□□□ -1.19
CSM3YMR048W AI1P03875 834 aa7.62□□□□□ -1.19
CSM3YMR048W UBP1P25037 809 aa7.62□□□□□ -1.19
CSM3YMR048W YTA6P40328 754 aa7.62□□□□□ -1.19
CSM3YMR048W PHM7Q12252 991 aa7.62□□□□□ -1.19
CSM3YMR048W RPP1AP05318 106 aaPredicted RBP7.61□□□□□ -1.19
CSM3YMR048W LEU1P07264 779 aaKnown RBP7.61□□□□□ -1.19
CSM3YMR048W GAL2P13181 574 aa7.61□□□□□ -1.19
CSM3YMR048W FPS1P23900 669 aa7.61□□□□□ -1.19
CSM3YMR048W MRPL16P38064 232 aa7.61□□□□□ -1.19
CSM3YMR048W TTI1P36097 1038 aa7.6□□□□□ -1.19
CSM3YMR048W YNL165WP53891 406 aa7.59□□□□□ -1.19
CSM3YMR048W SPR3P41901 512 aa7.58□□□□□ -1.2
CSM3YMR048W PUS1Q12211 544 aaKnown RBP7.58□□□□□ -1.2
CSM3YMR048W STB3Q12427 513 aa7.58□□□□□ -1.2
CSM3YMR048W TGL4P36165 910 aa7.57□□□□□ -1.2
CSM3YMR048W UTP4Q06679 776 aaKnown RBP7.57□□□□□ -1.2
CSM3YMR048W MLF3P32047 452 aa7.56□□□□□ -1.2
CSM3YMR048W NGR1P32831 672 aaKnown RBP7.56□□□□□ -1.2
CSM3YMR048W ALD2P47771 506 aa7.56□□□□□ -1.2
CSM3YMR048W ROM1P53046 1155 aa7.56□□□□□ -1.2
CSM3YMR048W NSG2P53898 299 aa7.56□□□□□ -1.2
CSM3YMR048W THI72Q08579 599 aa7.56□□□□□ -1.2
CSM3YMR048W Q0182Q9ZZW1 134 aa7.56□□□□□ -1.2
CSM3YMR048W SCD5P34758 872 aa7.55□□□□□ -1.2
CSM3YMR048W MDJ1P35191 511 aa7.55□□□□□ -1.2
CSM3YMR048W RGP1P16664 663 aa7.54□□□□□ -1.2
CSM3YMR048W VAN1P23642 535 aa7.54□□□□□ -1.2
CSM3YMR048W YFL066CP43538 392 aa7.54□□□□□ -1.2
CSM3YMR048W GPM1P00950 247 aaKnown RBP7.53□□□□□ -1.2
CSM3YMR048W ECM23Q02710 187 aa7.52□□□□□ -1.21
CSM3YMR048W CWH41P53008 833 aa7.51□□□□□ -1.21
CSM3YMR048W TRS33Q99394 268 aa7.51□□□□□ -1.21
CSM3YMR048W HXT5P38695 592 aa7.5□□□□□ -1.21
CSM3YMR048W TY1A-DR2Q03964 440 aaKnown RBP7.5□□□□□ -1.21
CSM3YMR048W KNS1P32350 737 aaPredicted RBP7.49□□□□□ -1.21
CSM3YMR048W CPS1P27614 576 aa7.48□□□□□ -1.21
CSM3YMR048W SKP1P52286 194 aa7.48□□□□□ -1.21
CSM3YMR048W MTO1P53070 669 aa7.48□□□□□ -1.21
CSM3YMR048W HEH2Q03281 663 aa7.48□□□□□ -1.21
CSM3YMR048W PDC5P16467 563 aaKnown RBP7.47□□□□□ -1.21
CSM3YMR048W KAP122P32767 1081 aa7.47□□□□□ -1.21
CSM3YMR048W MSC7P38694 644 aa7.47□□□□□ -1.21
CSM3YMR048W PUP1P25043 261 aa7.46□□□□□ -1.22
CSM3YMR048W MET1P36150 593 aa7.46□□□□□ -1.22
CSM3YMR048W UBX7P38349 436 aa7.46□□□□□ -1.22
CSM3YMR048W SBE2P42223 864 aaKnown RBP7.46□□□□□ -1.22
CSM3YMR048W YNR014WP53719 212 aa7.45□□□□□ -1.22
CSM3YMR048W YPR053CQ6Q5F3 151 aa7.45□□□□□ -1.22
CSM3YMR048W SSA4P22202 642 aaKnown RBP7.44□□□□□ -1.22
CSM3YMR048W NCL1P38205 684 aaKnown RBP7.44□□□□□ -1.22
CSM3YMR048W LSB3P43603 459 aaKnown RBP7.44□□□□□ -1.22
CSM3YMR048W PUF6Q04373 656 aaKnown RBP7.44□□□□□ -1.22
CSM3YMR048W TDA6Q06466 467 aa7.44□□□□□ -1.22
CSM3YMR048W MCX1P38323 520 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms