RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C AAD14P42884 376 aa6.63□□□□□ -1.35
VPS25YJR102C CDC3P32457 520 aaKnown RBP6.62□□□□□ -1.35
VPS25YJR102C BRE2P43132 505 aa6.62□□□□□ -1.35
VPS25YJR102C TRS33Q99394 268 aa6.62□□□□□ -1.35
VPS25YJR102C DLD1P32891 587 aa6.61□□□□□ -1.35
VPS25YJR102C GCR2Q01722 534 aa6.61□□□□□ -1.35
VPS25YJR102C PUF6Q04373 656 aaKnown RBP6.61□□□□□ -1.35
VPS25YJR102C PUN1Q06991 263 aa6.61□□□□□ -1.35
VPS25YJR102C ALA1P40825 983 aaKnown RBP6.6□□□□□ -1.35
VPS25YJR102C CWH41P53008 833 aa6.6□□□□□ -1.35
VPS25YJR102C SUM1P46676 1062 aa6.59□□□□□ -1.35
VPS25YJR102C TPS3P38426 1054 aaKnown RBP6.57□□□□□ -1.36
VPS25YJR102C UBP1P25037 809 aa6.56□□□□□ -1.36
VPS25YJR102C NUP85P46673 744 aa6.56□□□□□ -1.36
VPS25YJR102C LSC2P53312 427 aa6.56□□□□□ -1.36
VPS25YJR102C CWC15Q03772 175 aaKnown RBP6.56□□□□□ -1.36
VPS25YJR102C PNP1Q05788 311 aa6.56□□□□□ -1.36
VPS25YJR102C SRS2P12954 1174 aa6.55□□□□□ -1.36
VPS25YJR102C ALD4P46367 519 aaKnown RBP6.55□□□□□ -1.36
VPS25YJR102C KAR5Q04746 504 aa6.55□□□□□ -1.36
VPS25YJR102C HAT1Q12341 374 aa6.55□□□□□ -1.36
VPS25YJR102C NGR1P32831 672 aaKnown RBP6.54□□□□□ -1.36
VPS25YJR102C FOX2Q02207 900 aaKnown RBP6.54□□□□□ -1.36
VPS25YJR102C FUR4P05316 633 aaKnown RBP6.53□□□□□ -1.36
VPS25YJR102C YJR098CP47139 656 aa6.53□□□□□ -1.36
VPS25YJR102C YPQ2Q06328 317 aa6.53□□□□□ -1.36
VPS25YJR102C SUV3P32580 737 aa6.52□□□□□ -1.37
VPS25YJR102C AHP1P38013 176 aaKnown RBP6.52□□□□□ -1.37
VPS25YJR102C SSN3P39073 555 aa6.52□□□□□ -1.37
VPS25YJR102C YML020WQ03722 664 aa6.52□□□□□ -1.37
VPS25YJR102C YLR346CQ06139 101 aa6.52□□□□□ -1.37
VPS25YJR102C TCB1Q12466 1186 aa6.52□□□□□ -1.37
VPS25YJR102C MCM1P11746 286 aa6.51□□□□□ -1.37
VPS25YJR102C RRN6P32786 894 aa6.51□□□□□ -1.37
VPS25YJR102C JJJ2P46997 583 aa6.5□□□□□ -1.37
VPS25YJR102C MSN5P52918 1224 aa6.5□□□□□ -1.37
VPS25YJR102C OPT2Q06593 877 aa6.49□□□□□ -1.37
VPS25YJR102C YBL113CQ7M4S9 792 aa6.49□□□□□ -1.37
VPS25YJR102C Q0182Q9ZZW1 134 aa6.49□□□□□ -1.37
VPS25YJR102C ISC10P32645 267 aa6.48□□□□□ -1.37
VPS25YJR102C BOL3P39724 118 aa6.48□□□□□ -1.37
VPS25YJR102C YTA6P40328 754 aa6.48□□□□□ -1.37
VPS25YJR102C UBP2Q01476 1272 aa6.48□□□□□ -1.37
VPS25YJR102C CAB1Q04430 367 aa6.48□□□□□ -1.37
VPS25YJR102C MLF3P32047 452 aa6.47□□□□□ -1.37
VPS25YJR102C SCD5P34758 872 aa6.47□□□□□ -1.37
VPS25YJR102C YBR197CP38306 217 aa6.47□□□□□ -1.37
VPS25YJR102C GLO3P38682 493 aaKnown RBP6.47□□□□□ -1.37
VPS25YJR102C SSF1P38789 453 aaPredicted RBP6.47□□□□□ -1.37
VPS25YJR102C IRE1P32361 1115 aa6.46□□□□□ -1.38
VPS25YJR102C DAL1P32375 460 aa6.46□□□□□ -1.38
VPS25YJR102C GRS1P38088 690 aaKnown RBP6.46□□□□□ -1.38
VPS25YJR102C HXT5P38695 592 aa6.46□□□□□ -1.38
VPS25YJR102C YNL165WP53891 406 aa6.46□□□□□ -1.38
VPS25YJR102C SHM1P37292 490 aaPredicted RBP6.45□□□□□ -1.38
VPS25YJR102C ERP5P38819 212 aa6.45□□□□□ -1.38
VPS25YJR102C VTC4P47075 721 aa6.45□□□□□ -1.38
VPS25YJR102C SCW11P53189 542 aa6.45□□□□□ -1.38
VPS25YJR102C TY1A-DR3Q12441 440 aa6.45□□□□□ -1.38
VPS25YJR102C MET22P32179 357 aa6.44□□□□□ -1.38
VPS25YJR102C YDR444WQ04093 687 aa6.44□□□□□ -1.38
VPS25YJR102C SLA1P32790 1244 aa6.43□□□□□ -1.38
VPS25YJR102C SLD2P34252 453 aa6.43□□□□□ -1.38
VPS25YJR102C QDR1P40475 563 aa6.43□□□□□ -1.38
VPS25YJR102C MRPL33P20084 86 aa6.42□□□□□ -1.38
VPS25YJR102C GLY1P37303 387 aaKnown RBP6.42□□□□□ -1.38
VPS25YJR102C LCB5Q06147 687 aaKnown RBP6.42□□□□□ -1.38
VPS25YJR102C UBP15P50101 1230 aa6.41□□□□□ -1.38
VPS25YJR102C SUT1P53032 299 aaKnown RBP6.41□□□□□ -1.38
VPS25YJR102C MTO1P53070 669 aa6.41□□□□□ -1.38
VPS25YJR102C ATG1P53104 897 aa6.41□□□□□ -1.38
VPS25YJR102C RPS31P05759 152 aaKnown RBP6.4□□□□□ -1.38
VPS25YJR102C PDC6P26263 563 aaKnown RBP6.4□□□□□ -1.38
VPS25YJR102C GAR1P28007 205 aaKnown RBP6.4□□□□□ -1.38
VPS25YJR102C BOI1P38041 980 aaKnown RBP6.4□□□□□ -1.38
VPS25YJR102C OSH7P38755 437 aa6.4□□□□□ -1.38
VPS25YJR102C QDR2P40474 542 aa6.4□□□□□ -1.38
VPS25YJR102C UTP4Q06679 776 aaKnown RBP6.4□□□□□ -1.38
VPS25YJR102C PSH1Q12161 406 aa6.4□□□□□ -1.38
VPS25YJR102C TY1A-BLQ12266 440 aa6.4□□□□□ -1.38
VPS25YJR102C LSO1Q3E827 93 aa6.4□□□□□ -1.38
VPS25YJR102C CDC19P00549 500 aaKnown RBP6.39□□□□□ -1.39
VPS25YJR102C RPB10P22139 70 aa6.39□□□□□ -1.39
VPS25YJR102C VMA3P25515 160 aa6.39□□□□□ -1.39
VPS25YJR102C TRL1P09880 827 aaKnown RBP6.38□□□□□ -1.39
VPS25YJR102C GBP2P25555 427 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
VPS25YJR102C LDH1P38139 375 aa6.38□□□□□ -1.39
VPS25YJR102C DYS1P38791 387 aa6.38□□□□□ -1.39
VPS25YJR102C STM1P39015 273 aaKnown RBP6.38□□□□□ -1.39
VPS25YJR102C NOP8Q08287 484 aaPredicted RBP6.38□□□□□ -1.39
VPS25YJR102C YHL050CP38721 697 aa6.37□□□□□ -1.39
VPS25YJR102C YHR219WP38900 624 aa6.37□□□□□ -1.39
VPS25YJR102C MDJ2P42834 146 aa6.37□□□□□ -1.39
VPS25YJR102C KAP122P32767 1081 aa6.36□□□□□ -1.39
VPS25YJR102C SPR3P41901 512 aa6.36□□□□□ -1.39
VPS25YJR102C ACF4P47129 309 aa6.36□□□□□ -1.39
VPS25YJR102C STB3Q12427 513 aa6.36□□□□□ -1.39
VPS25YJR102C ROG3P43602 733 aa6.35□□□□□ -1.39
VPS25YJR102C ALD2P47771 506 aa6.35□□□□□ -1.39
VPS25YJR102C CAF120P53836 1060 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms