RNA–Protein interactions for RNA: YJR022W

LSM8, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM8, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM8	YJR022W	EMP47	P43555	445 aa		4.97	□□□□□ -1.61
LSM8	YJR022W	MRX12	P47084	519 aa		4.97	□□□□□ -1.61
LSM8	YJR022W	ISF1	P32488	338 aa		4.96	□□□□□ -1.62
LSM8	YJR022W	RPN1	P38764	993 aa	Known RBP	4.96	□□□□□ -1.62
LSM8	YJR022W	YCK2	P23292	546 aa	Known RBP	4.95	□□□□□ -1.62
LSM8	YJR022W	TBS1	P38114	1094 aa		4.95	□□□□□ -1.62
LSM8	YJR022W	HAL5	P38970	855 aa	Known RBP	4.95	□□□□□ -1.62
LSM8	YJR022W	JJJ2	P46997	583 aa		4.95	□□□□□ -1.62
LSM8	YJR022W	MCM16	Q12262	181 aa		4.95	□□□□□ -1.62
LSM8	YJR022W	FPS1	P23900	669 aa		4.94	□□□□□ -1.62
LSM8	YJR022W	SUM1	P46676	1062 aa		4.94	□□□□□ -1.62
LSM8	YJR022W	YDR215C	Q12240	137 aa		4.94	□□□□□ -1.62
LSM8	YJR022W	GLT1	Q12680	2145 aa	Known RBP	4.93	□□□□□ -1.62
LSM8	YJR022W	KIN1	P13185	1064 aa		4.93	□□□□□ -1.62
LSM8	YJR022W	CSE4	P36012	229 aa		4.93	□□□□□ -1.62
LSM8	YJR022W	BOI2	P39969	1040 aa		4.93	□□□□□ -1.62
LSM8	YJR022W	ALA1	P40825	983 aa	Known RBP	4.93	□□□□□ -1.62
LSM8	YJR022W	DMA2	P53924	522 aa		4.93	□□□□□ -1.62
LSM8	YJR022W	SPT5	P27692	1063 aa	Known RBP	4.92	□□□□□ -1.62
LSM8	YJR022W	IRE1	P32361	1115 aa		4.92	□□□□□ -1.62
LSM8	YJR022W	SHM1	P37292	490 aa	Predicted RBP	4.92	□□□□□ -1.62
LSM8	YJR022W	AMN1	P38285	549 aa	Predicted RBP	4.91	□□□□□ -1.62
LSM8	YJR022W	SLN1	P39928	1220 aa	Predicted RBP	4.91	□□□□□ -1.62
LSM8	YJR022W	SLX8	P40072	274 aa		4.91	□□□□□ -1.62
LSM8	YJR022W	MRPL16	P38064	232 aa		4.9	□□□□□ -1.63
LSM8	YJR022W	PSH1	Q12161	406 aa		4.9	□□□□□ -1.63
LSM8	YJR022W	YDJ1	P25491	409 aa	Known RBP	4.89	□□□□□ -1.63
LSM8	YJR022W	PDC6	P26263	563 aa	Known RBP	4.89	□□□□□ -1.63
LSM8	YJR022W	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
LSM8	YJR022W	MCA1	Q08601	432 aa		4.89	□□□□□ -1.63
LSM8	YJR022W	PDC5	P16467	563 aa	Known RBP	4.88	□□□□□ -1.63
LSM8	YJR022W	MET1	P36150	593 aa		4.88	□□□□□ -1.63
LSM8	YJR022W	STB3	Q12427	513 aa		4.88	□□□□□ -1.63
LSM8	YJR022W	GUA1	P38625	525 aa	Known RBP	4.87	□□□□□ -1.63
LSM8	YJR022W	SOH1	P38633	127 aa		4.87	□□□□□ -1.63
LSM8	YJR022W	UTP13	Q05946	817 aa	Known RBP	4.87	□□□□□ -1.63
LSM8	YJR022W	HDA3	Q06623	655 aa		4.87	□□□□□ -1.63
LSM8	YJR022W	YBL036C	P38197	257 aa		4.86	□□□□□ -1.63
LSM8	YJR022W	SPR3	P41901	512 aa		4.86	□□□□□ -1.63
LSM8	YJR022W	LSB6	P42951	607 aa		4.86	□□□□□ -1.63
LSM8	YJR022W	RPS31	P05759	152 aa	Known RBP	4.85	□□□□□ -1.63
LSM8	YJR022W	TAT1	P38085	619 aa		4.85	□□□□□ -1.63
LSM8	YJR022W	ATG3	P40344	310 aa		4.85	□□□□□ -1.63
LSM8	YJR022W	TY1A-DR2	Q03964	440 aa	Known RBP	4.85	□□□□□ -1.63
LSM8	YJR022W	YPQ2	Q06328	317 aa		4.84	□□□□□ -1.63
LSM8	YJR022W	HPC2	Q01448	625 aa		4.83	□□□□□ -1.64
LSM8	YJR022W	RLF2	Q12495	606 aa		4.83	□□□□□ -1.64
LSM8	YJR022W	YPP1	P46951	817 aa		4.82	□□□□□ -1.64
LSM8	YJR022W	PRY1	P47032	299 aa		4.82	□□□□□ -1.64
LSM8	YJR022W	LEU1	P07264	779 aa	Known RBP	4.81	□□□□□ -1.64
LSM8	YJR022W	MAC1	P35192	417 aa		4.81	□□□□□ -1.64
LSM8	YJR022W	MSC7	P38694	644 aa		4.81	□□□□□ -1.64
LSM8	YJR022W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
LSM8	YJR022W	SWI5	P08153	709 aa		4.8	□□□□□ -1.64
LSM8	YJR022W	BIO2	P32451	375 aa		4.8	□□□□□ -1.64
LSM8	YJR022W	ALD2	P47771	506 aa		4.8	□□□□□ -1.64
LSM8	YJR022W	YPL034W	Q03083	165 aa		4.79	□□□□□ -1.64
LSM8	YJR022W	TFB3	Q03290	321 aa		4.79	□□□□□ -1.64
LSM8	YJR022W	BRL1	P38770	471 aa		4.78	□□□□□ -1.64
LSM8	YJR022W	YNL165W	P53891	406 aa		4.78	□□□□□ -1.64
LSM8	YJR022W	RPP1A	P05318	106 aa	Predicted RBP	4.77	□□□□□ -1.65
LSM8	YJR022W	SUP45	P12385	437 aa	Known RBP	4.77	□□□□□ -1.65
LSM8	YJR022W	RGP1	P16664	663 aa		4.77	□□□□□ -1.65
LSM8	YJR022W	AIM9	P40053	627 aa	Known RBP	4.77	□□□□□ -1.65
LSM8	YJR022W	ENO2	P00925	437 aa	Known RBP	4.76	□□□□□ -1.65
LSM8	YJR022W	PKC1	P24583	1151 aa		4.76	□□□□□ -1.65
LSM8	YJR022W	TPS3	P38426	1054 aa	Known RBP	4.76	□□□□□ -1.65
LSM8	YJR022W	ALO1	P54783	526 aa	Known RBP	4.76	□□□□□ -1.65
LSM8	YJR022W	RPS6A	P0CX37	236 aa	Known RBP	4.75	□□□□□ -1.65
LSM8	YJR022W	RPS6B	P0CX38	236 aa	Predicted RBP	4.75	□□□□□ -1.65
LSM8	YJR022W	MCM1	P11746	286 aa		4.75	□□□□□ -1.65
LSM8	YJR022W	YTA6	P40328	754 aa		4.75	□□□□□ -1.65
LSM8	YJR022W	YNL108C	P53929	270 aa		4.75	□□□□□ -1.65
LSM8	YJR022W	RDS2	P19541	446 aa	Known RBP	4.74	□□□□□ -1.65
LSM8	YJR022W	RIM21	P48565	533 aa		4.74	□□□□□ -1.65
LSM8	YJR022W	NHA1	Q99271	985 aa		4.74	□□□□□ -1.65
LSM8	YJR022W	MLF3	P32047	452 aa		4.73	□□□□□ -1.65
LSM8	YJR022W	PGM2	P37012	569 aa	Known RBP	4.73	□□□□□ -1.65
LSM8	YJR022W	BUD9	P53226	547 aa		4.73	□□□□□ -1.65
LSM8	YJR022W	ALG14	P38242	237 aa		4.72	□□□□□ -1.65
LSM8	YJR022W	INP52	P50942	1183 aa		4.72	□□□□□ -1.65
LSM8	YJR022W	OMA1	P36163	345 aa		4.71	□□□□□ -1.66
LSM8	YJR022W	YFL034W	P43564	1073 aa		4.71	□□□□□ -1.66
LSM8	YJR022W	HEH2	Q03281	663 aa		4.71	□□□□□ -1.66
LSM8	YJR022W	NTH2	P35172	780 aa		4.7	□□□□□ -1.66
LSM8	YJR022W	PRK1	P40494	810 aa		4.7	□□□□□ -1.66
LSM8	YJR022W	NAR1	P23503	491 aa	Known RBP	4.69	□□□□□ -1.66
LSM8	YJR022W	IRC24	P40580	263 aa		4.69	□□□□□ -1.66
LSM8	YJR022W	Q0182	Q9ZZW1	134 aa		4.69	□□□□□ -1.66
LSM8	YJR022W	AI3	P03877	415 aa		4.68	□□□□□ -1.66
LSM8	YJR022W	GIS4	Q04233	774 aa		4.68	□□□□□ -1.66
LSM8	YJR022W	PDI1	P17967	522 aa	Known RBP	4.67	□□□□□ -1.66
LSM8	YJR022W	PGM1	P33401	570 aa	Known RBP	4.67	□□□□□ -1.66
LSM8	YJR022W	SKP1	P52286	194 aa		4.66	□□□□□ -1.66
LSM8	YJR022W	MTO1	P53070	669 aa		4.66	□□□□□ -1.66
LSM8	YJR022W	GAS5	Q08193	484 aa		4.66	□□□□□ -1.66
LSM8	YJR022W	NCL1	P38205	684 aa	Known RBP	4.65	□□□□□ -1.67
LSM8	YJR022W	TSC13	Q99190	310 aa		4.65	□□□□□ -1.67
LSM8	YJR022W	CYT1	P07143	309 aa		4.64	□□□□□ -1.67
LSM8	YJR022W	SAC7	P17121	654 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms