RNA–Protein interactions for RNA: YIR022W

SEC11, Transcript of 18kDa catalytic subunit of the Signal Peptidase Complex (SPC), yeast

Gene SEC11, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC11	YIR022W	ECM21	P38167	1117 aa	Known RBP	13.64	□□□□□ -0.23
SEC11	YIR022W	CCT5	P40413	562 aa	Known RBP	13.64	□□□□□ -0.23
SEC11	YIR022W	RMD1	Q03441	430 aa		13.64	□□□□□ -0.23
SEC11	YIR022W	YMR196W	Q04336	1088 aa		13.64	□□□□□ -0.23
SEC11	YIR022W	RIM20	Q12033	661 aa		13.64	□□□□□ -0.23
SEC11	YIR022W	FKS3	Q04952	1785 aa		13.63	□□□□□ -0.23
SEC11	YIR022W	NUP133	P36161	1157 aa		13.63	□□□□□ -0.23
SEC11	YIR022W	RPN1	P38764	993 aa	Known RBP	13.63	□□□□□ -0.23
SEC11	YIR022W	SSF1	P38789	453 aa	Predicted RBP	13.63	□□□□□ -0.23
SEC11	YIR022W	STU2	P46675	888 aa		13.63	□□□□□ -0.23
SEC11	YIR022W	HOS3	Q02959	697 aa	Known RBP	13.63	□□□□□ -0.23
SEC11	YIR022W	TTI1	P36097	1038 aa		13.62	□□□□□ -0.23
SEC11	YIR022W	TCD1	P38756	429 aa		13.62	□□□□□ -0.23
SEC11	YIR022W	CST6	P40535	587 aa		13.62	□□□□□ -0.23
SEC11	YIR022W	SLM3	Q12093	417 aa		13.62	□□□□□ -0.23
SEC11	YIR022W	YIL177C	P40434	1758 aa		13.62	□□□□□ -0.23
SEC11	YIR022W	YJL225C	P40889	1758 aa		13.62	□□□□□ -0.23
SEC11	YIR022W	ELM1	P32801	640 aa		13.61	□□□□□ -0.23
SEC11	YIR022W	PRP5	P21372	849 aa	Predicted RBP	13.6	□□□□□ -0.23
SEC11	YIR022W	PRX1	P34227	261 aa	Known RBP	13.6	□□□□□ -0.23
SEC11	YIR022W	MPE1	P35728	441 aa	Known RBP	13.6	□□□□□ -0.23
SEC11	YIR022W	AAP1	P37898	856 aa	Known RBP	13.6	□□□□□ -0.23
SEC11	YIR022W	MLC1	P53141	149 aa		13.6	□□□□□ -0.23
SEC11	YIR022W	URB1	P34241	1764 aa	Known RBP	13.58	□□□□□ -0.23
SEC11	YIR022W	PBY1	P38254	753 aa		13.58	□□□□□ -0.24
SEC11	YIR022W	SPO22	P40511	975 aa		13.58	□□□□□ -0.24
SEC11	YIR022W	RCR1	P38212	213 aa		13.57	□□□□□ -0.24
SEC11	YIR022W	AIM9	P40053	627 aa	Known RBP	13.57	□□□□□ -0.24
SEC11	YIR022W	DUR1,2	P32528	1835 aa	Known RBP	13.56	□□□□□ -0.24
SEC11	YIR022W	XKS1	P42826	600 aa		13.56	□□□□□ -0.24
SEC11	YIR022W	ALE1	Q08548	619 aa		13.56	□□□□□ -0.24
SEC11	YIR022W	NPR3	P38742	1146 aa		13.55	□□□□□ -0.24
SEC11	YIR022W	UBP12	P39538	1254 aa		13.55	□□□□□ -0.24
SEC11	YIR022W	ZDS2	P54786	942 aa		13.55	□□□□□ -0.24
SEC11	YIR022W	MEC3	Q02574	474 aa		13.55	□□□□□ -0.24
SEC11	YIR022W	TIM50	Q02776	476 aa		13.55	□□□□□ -0.24
SEC11	YIR022W	PSK2	Q08217	1101 aa		13.55	□□□□□ -0.24
SEC11	YIR022W	SES1	P07284	462 aa	Known RBP	13.54	□□□□□ -0.24
SEC11	YIR022W	PRP45	P28004	379 aa	Predicted RBP	13.54	□□□□□ -0.24
SEC11	YIR022W	MFT1	P33441	392 aa	Known RBP	13.54	□□□□□ -0.24
SEC11	YIR022W	CTF18	P49956	741 aa		13.54	□□□□□ -0.24
SEC11	YIR022W	ARP5	P53946	755 aa		13.54	□□□□□ -0.24
SEC11	YIR022W	STM1	P39015	273 aa	Known RBP	13.53	□□□□□ -0.24
SEC11	YIR022W	YGL242C	P53066	181 aa		13.53	□□□□□ -0.24
SEC11	YIR022W	MRPS35	P53292	345 aa		13.53	□□□□□ -0.24
SEC11	YIR022W	SGD1	Q06132	899 aa		13.53	□□□□□ -0.24
SEC11	YIR022W	TSR3	Q12094	313 aa	Known RBP	13.53	□□□□□ -0.24
SEC11	YIR022W	SFI1	Q12369	946 aa		13.53	□□□□□ -0.24
SEC11	YIR022W	TCB1	Q12466	1186 aa		13.53	□□□□□ -0.24
SEC11	YIR022W	SWI1	P09547	1314 aa		13.53	□□□□□ -0.24
SEC11	YIR022W	KTR1	P27810	393 aa	Known RBP	13.52	□□□□□ -0.25
SEC11	YIR022W	INP54	Q08227	384 aa	Known RBP	13.52	□□□□□ -0.25
SEC11	YIR022W	TRS33	Q99394	268 aa		13.52	□□□□□ -0.25
SEC11	YIR022W	FRS2	P15625	503 aa	Known RBP	13.51	□□□□□ -0.25
SEC11	YIR022W	YJR008W	P47085	338 aa		13.51	□□□□□ -0.25
SEC11	YIR022W	MSB3	P48566	633 aa	Predicted RBP	13.51	□□□□□ -0.25
SEC11	YIR022W	LPD1	P09624	499 aa	Known RBP	13.5	□□□□□ -0.25
SEC11	YIR022W	LTV1	P34078	463 aa		13.5	□□□□□ -0.25
SEC11	YIR022W	VPS64	Q03944	604 aa		13.5	□□□□□ -0.25
SEC11	YIR022W	ELG1	Q12050	791 aa		13.5	□□□□□ -0.25
SEC11	YIR022W	CPA2	P03965	1118 aa	Known RBP	13.49	□□□□□ -0.25
SEC11	YIR022W	ATE1	P16639	503 aa		13.49	□□□□□ -0.25
SEC11	YIR022W	CEP3	P40969	608 aa		13.49	□□□□□ -0.25
SEC11	YIR022W	DDP1	Q99321	188 aa	Known RBP	13.49	□□□□□ -0.25
SEC11	YIR022W	ALO1	P54783	526 aa	Known RBP	13.48	□□□□□ -0.25
SEC11	YIR022W	SSL2	Q00578	843 aa		13.48	□□□□□ -0.25
SEC11	YIR022W	YHL017W	P38745	532 aa		13.47	□□□□□ -0.25
SEC11	YIR022W	THI12	P42883	340 aa		13.47	□□□□□ -0.25
SEC11	YIR022W	THI5	P43534	340 aa		13.47	□□□□□ -0.25
SEC11	YIR022W	ENT3	P47160	408 aa		13.47	□□□□□ -0.25
SEC11	YIR022W	THI11	P47183	340 aa		13.47	□□□□□ -0.25
SEC11	YIR022W	THI13	Q07748	340 aa		13.47	□□□□□ -0.25
SEC11	YIR022W	SUP35	P05453	685 aa	Known RBP	13.46	□□□□□ -0.25
SEC11	YIR022W	YPL150W	Q12152	901 aa		13.46	□□□□□ -0.25
SEC11	YIR022W	RDS1	P25611	832 aa		13.45	□□□□□ -0.26
SEC11	YIR022W	MBR1	P23493	339 aa		13.44	□□□□□ -0.26
SEC11	YIR022W	MNR2	P35724	969 aa		13.44	□□□□□ -0.26
SEC11	YIR022W	SIS2	P36024	562 aa		13.44	□□□□□ -0.26
SEC11	YIR022W	RRM3	P38766	723 aa		13.44	□□□□□ -0.26
SEC11	YIR022W	YKE2	P52553	114 aa		13.44	□□□□□ -0.26
SEC11	YIR022W	RMT2	Q03305	412 aa		13.44	□□□□□ -0.26
SEC11	YIR022W	VID28	P40547	921 aa		13.42	□□□□□ -0.26
SEC11	YIR022W	VPS60	Q03390	229 aa		13.42	□□□□□ -0.26
SEC11	YIR022W	MAL33	P38157	468 aa		13.41	□□□□□ -0.26
SEC11	YIR022W	OSH3	P38713	996 aa	Known RBP	13.41	□□□□□ -0.26
SEC11	YIR022W	CIC1	P38779	376 aa	Known RBP	13.41	□□□□□ -0.26
SEC11	YIR022W	SET1	P38827	1080 aa	Known RBP	13.41	□□□□□ -0.26
SEC11	YIR022W	TFG2	P41896	400 aa	Predicted RBP	13.41	□□□□□ -0.26
SEC11	YIR022W	SMC3	P47037	1230 aa		13.41	□□□□□ -0.26
SEC11	YIR022W	BBC1	P47068	1157 aa		13.41	□□□□□ -0.26
SEC11	YIR022W	OSM1	P21375	501 aa	Known RBP	13.4	□□□□□ -0.26
SEC11	YIR022W	SPC110	P32380	944 aa		13.4	□□□□□ -0.26
SEC11	YIR022W	KTR3	P38130	404 aa	Predicted RBP	13.4	□□□□□ -0.26
SEC11	YIR022W	CIN4	P39110	191 aa		13.4	□□□□□ -0.26
SEC11	YIR022W	BUD6	P41697	788 aa		13.4	□□□□□ -0.26
SEC11	YIR022W	YGR130C	P53278	816 aa		13.4	□□□□□ -0.26
SEC11	YIR022W	PKH1	Q03407	766 aa		13.4	□□□□□ -0.26
SEC11	YIR022W	GPA1	P08539	472 aa		13.39	□□□□□ -0.27
SEC11	YIR022W	YER130C	P39959	443 aa		13.39	□□□□□ -0.27
SEC11	YIR022W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.39	□□□□□ -0.27	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms