RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C ADE12P80210 433 aaKnown RBP9.23□□□□□ -0.93
NEM1YHR004C SYT1Q06836 1226 aa9.23□□□□□ -0.93
NEM1YHR004C HAL5P38970 855 aaKnown RBP9.22□□□□□ -0.93
NEM1YHR004C UTP7P40055 554 aaKnown RBP9.22□□□□□ -0.93
NEM1YHR004C SUM1P46676 1062 aa9.22□□□□□ -0.93
NEM1YHR004C YDR461C-AQ2V2P7 80 aa9.22□□□□□ -0.93
NEM1YHR004C PKC1P24583 1151 aa9.21□□□□□ -0.94
NEM1YHR004C SOH1P38633 127 aa9.21□□□□□ -0.94
NEM1YHR004C HDA3Q06623 655 aa9.19□□□□□ -0.94
NEM1YHR004C TY1A-DR3Q12441 440 aa9.19□□□□□ -0.94
NEM1YHR004C SUP45P12385 437 aaKnown RBP9.18□□□□□ -0.94
NEM1YHR004C SLX8P40072 274 aa9.17□□□□□ -0.94
NEM1YHR004C BIO2P32451 375 aa9.16□□□□□ -0.94
NEM1YHR004C JJJ2P46997 583 aa9.16□□□□□ -0.94
NEM1YHR004C YNL108CP53929 270 aa9.16□□□□□ -0.94
NEM1YHR004C YFL066CP43538 392 aa9.15□□□□□ -0.94
NEM1YHR004C IRE1P32361 1115 aa9.14□□□□□ -0.95
NEM1YHR004C ENO2P00925 437 aaKnown RBP9.12□□□□□ -0.95
NEM1YHR004C FPS1P23900 669 aa9.11□□□□□ -0.95
NEM1YHR004C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
NEM1YHR004C YPR053CQ6Q5F3 151 aa9.1□□□□□ -0.95
NEM1YHR004C HGH1P48362 394 aaKnown RBP9.09□□□□□ -0.95
NEM1YHR004C YFL034WP43564 1073 aa9.08□□□□□ -0.96
NEM1YHR004C RIM21P48565 533 aa9.08□□□□□ -0.96
NEM1YHR004C YJL007CP47080 104 aa9.07□□□□□ -0.96
NEM1YHR004C SWI5P08153 709 aa9.05□□□□□ -0.96
NEM1YHR004C MRPL16P38064 232 aa9.05□□□□□ -0.96
NEM1YHR004C AIM9P40053 627 aaKnown RBP9.05□□□□□ -0.96
NEM1YHR004C CCT8P47079 568 aaKnown RBP9.05□□□□□ -0.96
NEM1YHR004C YNR014WP53719 212 aa9.05□□□□□ -0.96
NEM1YHR004C YMR187CQ03236 431 aa9.05□□□□□ -0.96
NEM1YHR004C RPP1AP05318 106 aaPredicted RBP9.04□□□□□ -0.96
NEM1YHR004C SHM1P37292 490 aaPredicted RBP9.04□□□□□ -0.96
NEM1YHR004C TDA6Q06466 467 aa9.04□□□□□ -0.96
NEM1YHR004C PDC6P26263 563 aaKnown RBP9.03□□□□□ -0.96
NEM1YHR004C SBE2P42223 864 aaKnown RBP9.03□□□□□ -0.96
NEM1YHR004C PSH1Q12161 406 aa9.03□□□□□ -0.96
NEM1YHR004C GPM1P00950 247 aaKnown RBP9.02□□□□□ -0.97
NEM1YHR004C YPQ2Q06328 317 aa9.02□□□□□ -0.97
NEM1YHR004C SKN7P38889 622 aa9.01□□□□□ -0.97
NEM1YHR004C STB3Q12427 513 aa9.01□□□□□ -0.97
NEM1YHR004C MET1P36150 593 aa9□□□□□ -0.97
NEM1YHR004C RPS6AP0CX37 236 aaKnown RBP8.99□□□□□ -0.97
NEM1YHR004C RPS6BP0CX38 236 aaPredicted RBP8.99□□□□□ -0.97
NEM1YHR004C RDS2P19541 446 aaKnown RBP8.99□□□□□ -0.97
NEM1YHR004C MCX1P38323 520 aaPredicted RBP8.98□□□□□ -0.97
NEM1YHR004C YTA6P40328 754 aa8.98□□□□□ -0.97
NEM1YHR004C SBP1P10080 294 aaKnown RBP8.97□□□□□ -0.97
NEM1YHR004C MCM1P11746 286 aa8.97□□□□□ -0.97
NEM1YHR004C BOI2P39969 1040 aa8.97□□□□□ -0.97
NEM1YHR004C RPL34BP40525 121 aaKnown RBP8.97□□□□□ -0.97
NEM1YHR004C SPR3P41901 512 aa8.97□□□□□ -0.97
NEM1YHR004C KNS1P32350 737 aaPredicted RBP8.96□□□□□ -0.98
NEM1YHR004C NTH2P35172 780 aa8.96□□□□□ -0.98
NEM1YHR004C RPS31P05759 152 aaKnown RBP8.95□□□□□ -0.98
NEM1YHR004C TSC13Q99190 310 aa8.95□□□□□ -0.98
NEM1YHR004C LEU1P07264 779 aaKnown RBP8.94□□□□□ -0.98
NEM1YHR004C BIM1P40013 344 aa8.94□□□□□ -0.98
NEM1YHR004C MRX10Q05648 414 aa8.94□□□□□ -0.98
NEM1YHR004C RTG2P32608 588 aaKnown RBP8.93□□□□□ -0.98
NEM1YHR004C ENO1P00924 437 aaKnown RBP8.92□□□□□ -0.98
NEM1YHR004C TIF1P10081 395 aaKnown RBP8.92□□□□□ -0.98
NEM1YHR004C PDI1P17967 522 aaKnown RBP8.92□□□□□ -0.98
NEM1YHR004C PDC5P16467 563 aaKnown RBP8.91□□□□□ -0.98
NEM1YHR004C ATG32P40458 529 aa8.9□□□□□ -0.98
NEM1YHR004C TY1A-DR2Q03964 440 aaKnown RBP8.9□□□□□ -0.98
NEM1YHR004C NRD1P53617 575 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
NEM1YHR004C RGP1P16664 663 aa8.88□□□□□ -0.99
NEM1YHR004C CYT1P07143 309 aa8.86□□□□□ -0.99
NEM1YHR004C ALD2P47771 506 aa8.86□□□□□ -0.99
NEM1YHR004C YNL165WP53891 406 aa8.86□□□□□ -0.99
NEM1YHR004C Q0182Q9ZZW1 134 aa8.86□□□□□ -0.99
NEM1YHR004C MLF3P32047 452 aa8.84□□□□□ -0.99
NEM1YHR004C YCK2P23292 546 aaKnown RBP8.83□□□□□ -1
NEM1YHR004C PEP12P32854 288 aa8.83□□□□□ -1
NEM1YHR004C HEH2Q03281 663 aa8.83□□□□□ -1
NEM1YHR004C YDR215CQ12240 137 aa8.83□□□□□ -1
NEM1YHR004C TAT1P38085 619 aa8.82□□□□□ -1
NEM1YHR004C MSC7P38694 644 aa8.81□□□□□ -1
NEM1YHR004C HAP4P14064 554 aa8.8□□□□□ -1
NEM1YHR004C SIS2P36024 562 aa8.8□□□□□ -1
NEM1YHR004C UTP4Q06679 776 aaKnown RBP8.8□□□□□ -1
NEM1YHR004C PHO87P25360 923 aa8.8□□□□□ -1
NEM1YHR004C SLN1P39928 1220 aaPredicted RBP8.79□□□□□ -1
NEM1YHR004C MTO1P53070 669 aa8.79□□□□□ -1
NEM1YHR004C ACS2P52910 683 aaKnown RBP8.78□□□□□ -1
NEM1YHR004C GAS4Q08271 471 aa8.78□□□□□ -1
NEM1YHR004C SCD5P34758 872 aa8.77□□□□□ -1.01
NEM1YHR004C NCL1P38205 684 aaKnown RBP8.77□□□□□ -1.01
NEM1YHR004C UBP1P25037 809 aa8.76□□□□□ -1.01
NEM1YHR004C AMN1P38285 549 aaPredicted RBP8.76□□□□□ -1.01
NEM1YHR004C KTR7P40504 517 aa8.76□□□□□ -1.01
NEM1YHR004C LSB6P42951 607 aa8.76□□□□□ -1.01
NEM1YHR004C NHA1Q99271 985 aa8.76□□□□□ -1.01
NEM1YHR004C TPS3P38426 1054 aaKnown RBP8.73□□□□□ -1.01
NEM1YHR004C SKP1P52286 194 aa8.73□□□□□ -1.01
NEM1YHR004C MCA1Q08601 432 aa8.73□□□□□ -1.01
NEM1YHR004C KAP122P32767 1081 aa8.72□□□□□ -1.01
NEM1YHR004C NGR1P32831 672 aaKnown RBP8.71□□□□□ -1.02
NEM1YHR004C ALG14P38242 237 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms