RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C HEF3P53978 1044 aaKnown RBP16.85■□□□□ 0.29
SHU1YHL006C GRX6Q12438 231 aa16.85■□□□□ 0.29
SHU1YHL006C YDL144CQ07589 356 aa16.84■□□□□ 0.29
SHU1YHL006C RPS9BP05755 195 aaKnown RBP16.83■□□□□ 0.28
SHU1YHL006C RET1P22276 1149 aaKnown RBP16.83■□□□□ 0.28
SHU1YHL006C YLR271WQ06152 274 aa16.83■□□□□ 0.28
SHU1YHL006C THS1P04801 734 aaKnown RBP16.82■□□□□ 0.28
SHU1YHL006C TPD3P31383 635 aa16.82■□□□□ 0.28
SHU1YHL006C SAS4Q04003 481 aa16.82■□□□□ 0.28
SHU1YHL006C DIP2Q12220 943 aaPredicted RBP16.82■□□□□ 0.28
SHU1YHL006C FCP1Q03254 732 aa16.8■□□□□ 0.28
SHU1YHL006C SWI1P09547 1314 aa16.79■□□□□ 0.28
SHU1YHL006C DNM1P54861 757 aa16.79■□□□□ 0.28
SHU1YHL006C PKH1Q03407 766 aa16.79■□□□□ 0.28
SHU1YHL006C YLR278CQ05854 1341 aa16.78■□□□□ 0.28
SHU1YHL006C HKR1P41809 1802 aa16.78■□□□□ 0.28
SHU1YHL006C SRT1Q03175 343 aa16.78■□□□□ 0.28
SHU1YHL006C YDR306CQ06640 478 aa16.76■□□□□ 0.27
SHU1YHL006C RTG2P32608 588 aaKnown RBP16.74■□□□□ 0.27
SHU1YHL006C CST6P40535 587 aa16.74■□□□□ 0.27
SHU1YHL006C DPL1Q05567 589 aa16.74■□□□□ 0.27
SHU1YHL006C YJR008WP47085 338 aa16.73■□□□□ 0.27
SHU1YHL006C GAP1P19145 602 aaPredicted RBP16.72■□□□□ 0.27
SHU1YHL006C FIG2P25653 1609 aa16.71■□□□□ 0.27
SHU1YHL006C NUP133P36161 1157 aa16.71■□□□□ 0.27
SHU1YHL006C SET4P42948 560 aa16.7■□□□□ 0.26
SHU1YHL006C MRP7P12687 371 aa16.69■□□□□ 0.26
SHU1YHL006C MSM1P22438 575 aa16.69■□□□□ 0.26
SHU1YHL006C TOM1Q03280 3268 aa16.68■□□□□ 0.26
SHU1YHL006C FET4P40988 552 aa16.67■□□□□ 0.26
SHU1YHL006C NSR1P27476 414 aaKnown RBP RIP-Chip data16.66■□□□□ 0.26not detected
SHU1YHL006C YGR122WP53272 402 aa16.66■□□□□ 0.26
SHU1YHL006C SET1P38827 1080 aaKnown RBP16.65■□□□□ 0.26
SHU1YHL006C ICP55P40051 511 aa16.65■□□□□ 0.26
SHU1YHL006C ITC1P53125 1264 aa16.65■□□□□ 0.26
SHU1YHL006C DPH6Q12429 685 aa16.65■□□□□ 0.26
SHU1YHL006C TRP5P00931 707 aaKnown RBP16.64■□□□□ 0.25
SHU1YHL006C SUI2P20459 304 aaKnown RBP16.64■□□□□ 0.25
SHU1YHL006C KRE2P27809 442 aa16.64■□□□□ 0.25
SHU1YHL006C GLC3P32775 704 aa16.64■□□□□ 0.25
SHU1YHL006C VHR2P40041 505 aa16.64■□□□□ 0.25
SHU1YHL006C GAS5Q08193 484 aa16.63■□□□□ 0.25
SHU1YHL006C TRM44Q02648 567 aaKnown RBP16.61■□□□□ 0.25
SHU1YHL006C TIM50Q02776 476 aa16.61■□□□□ 0.25
SHU1YHL006C SPL2P38839 148 aa16.6■□□□□ 0.25
SHU1YHL006C RPT4P53549 437 aaKnown RBP16.6■□□□□ 0.25
SHU1YHL006C AIM7Q12156 149 aa16.6■□□□□ 0.25
SHU1YHL006C PSH1Q12161 406 aa16.6■□□□□ 0.25
SHU1YHL006C SAC3P46674 1301 aa16.6■□□□□ 0.25
SHU1YHL006C SWC3P31376 625 aa16.58■□□□□ 0.24
SHU1YHL006C TIF4632P39936 914 aaKnown RBP16.58■□□□□ 0.24
SHU1YHL006C VPS4P52917 437 aa16.58■□□□□ 0.24
SHU1YHL006C MGM1P32266 881 aa16.57■□□□□ 0.24
SHU1YHL006C AFG2P32794 780 aa16.57■□□□□ 0.24
SHU1YHL006C NGR1P32831 672 aaKnown RBP16.57■□□□□ 0.24
SHU1YHL006C THI3Q07471 609 aa16.57■□□□□ 0.24
SHU1YHL006C RPP0P05317 312 aaKnown RBP16.56■□□□□ 0.24
SHU1YHL006C RAD24P32641 659 aa16.56■□□□□ 0.24
SHU1YHL006C STV1P37296 890 aa16.56■□□□□ 0.24
SHU1YHL006C YGR117CP53270 476 aa16.56■□□□□ 0.24
SHU1YHL006C RRG1Q12167 365 aaPredicted RBP16.56■□□□□ 0.24
SHU1YHL006C YIL089WP40500 205 aa16.54■□□□□ 0.24
SHU1YHL006C HXT10P43581 546 aa16.54■□□□□ 0.24
SHU1YHL006C UBX2Q04228 584 aa16.54■□□□□ 0.24
SHU1YHL006C GSM1P42950 618 aa16.53■□□□□ 0.24
SHU1YHL006C EMP47P43555 445 aa16.53■□□□□ 0.24
SHU1YHL006C ETP1P38748 585 aaKnown RBP16.52■□□□□ 0.24
SHU1YHL006C UBP12P39538 1254 aa16.52■□□□□ 0.24
SHU1YHL006C VPS27P40343 622 aaKnown RBP16.52■□□□□ 0.24
SHU1YHL006C MTC5Q03897 1148 aa16.52■□□□□ 0.24
SHU1YHL006C FLO11P08640 1367 aa16.51■□□□□ 0.23
SHU1YHL006C HPR1P17629 752 aaKnown RBP16.51■□□□□ 0.23
SHU1YHL006C PEA2P40091 420 aa16.51■□□□□ 0.23
SHU1YHL006C NOP8Q08287 484 aaPredicted RBP16.51■□□□□ 0.23
SHU1YHL006C CRF1Q04930 467 aa16.5■□□□□ 0.23
SHU1YHL006C YPP1P46951 817 aa16.49■□□□□ 0.23
SHU1YHL006C DUS1P53759 423 aaKnown RBP16.49■□□□□ 0.23
SHU1YHL006C TOS4Q06266 489 aa16.49■□□□□ 0.23
SHU1YHL006C DUR1,2P32528 1835 aaKnown RBP16.47■□□□□ 0.23
SHU1YHL006C IRC4Q03036 179 aa16.47■□□□□ 0.23
SHU1YHL006C CSI1Q04368 295 aa16.47■□□□□ 0.23
SHU1YHL006C LCB1P25045 558 aaKnown RBP16.46■□□□□ 0.23
SHU1YHL006C BOI2P39969 1040 aa16.46■□□□□ 0.23
SHU1YHL006C SRC1Q03707 834 aa16.46■□□□□ 0.23
SHU1YHL006C PRP42Q03776 544 aaKnown RBP16.46■□□□□ 0.23
SHU1YHL006C CWC15Q03772 175 aaKnown RBP16.44■□□□□ 0.22
SHU1YHL006C SUP35P05453 685 aaKnown RBP16.43■□□□□ 0.22
SHU1YHL006C CDC45Q08032 650 aa16.43■□□□□ 0.22
SHU1YHL006C SNU66Q12420 587 aaPredicted RBP16.43■□□□□ 0.22
SHU1YHL006C SEN54Q02825 467 aaPredicted RBP16.42■□□□□ 0.22
SHU1YHL006C MAK21Q12176 1025 aaKnown RBP16.42■□□□□ 0.22
SHU1YHL006C RVB2Q12464 471 aaKnown RBP16.41■□□□□ 0.22
SHU1YHL006C POM152P39685 1337 aa16.41■□□□□ 0.22
SHU1YHL006C TYW1Q08960 810 aaKnown RBP16.4■□□□□ 0.22
SHU1YHL006C ADR1P07248 1323 aa16.4■□□□□ 0.22
SHU1YHL006C ARG82P07250 355 aa16.39■□□□□ 0.21
SHU1YHL006C RPS7AP26786 190 aaKnown RBP16.39■□□□□ 0.21
SHU1YHL006C CBP1P07252 654 aa16.38■□□□□ 0.21
SHU1YHL006C RPS19AP07280 144 aaKnown RBP16.38■□□□□ 0.21
SHU1YHL006C RPS19BP07281 144 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 5,963 RNA–protein pairs in 91.8 ms