RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W RTG1P32607 177 aa5.98□□□□□ -1.45
CDC4YFL009W ISM1P48526 1002 aa5.98□□□□□ -1.45
CDC4YFL009W BUD21Q08492 214 aaPredicted RBP5.98□□□□□ -1.45
CDC4YFL009W PLP2Q12017 286 aa5.98□□□□□ -1.45
CDC4YFL009W LSP1Q12230 341 aaKnown RBP5.98□□□□□ -1.45
CDC4YFL009W GDB1Q06625 1536 aa5.97□□□□□ -1.45
CDC4YFL009W MSP1P28737 362 aa5.97□□□□□ -1.45
CDC4YFL009W TGL4P36165 910 aa5.97□□□□□ -1.45
CDC4YFL009W KIP3P53086 805 aaKnown RBP5.97□□□□□ -1.45
CDC4YFL009W MDS3P53094 1487 aa5.97□□□□□ -1.45
CDC4YFL009W TY3B-IQ7LHG5 1498 aaKnown RBP5.97□□□□□ -1.45
CDC4YFL009W HSP82P02829 709 aaKnown RBP5.97□□□□□ -1.45
CDC4YFL009W SEC61P32915 480 aa5.97□□□□□ -1.45
CDC4YFL009W NMD2P38798 1089 aaKnown RBP5.97□□□□□ -1.45
CDC4YFL009W MRX12P47084 519 aa5.97□□□□□ -1.45
CDC4YFL009W YDL144CQ07589 356 aa5.97□□□□□ -1.45
CDC4YFL009W IQG1Q12280 1495 aa5.96□□□□□ -1.45
CDC4YFL009W YPP1P46951 817 aa5.96□□□□□ -1.46
CDC4YFL009W PUS6P53294 404 aa5.96□□□□□ -1.46
CDC4YFL009W NAF1P53919 492 aaKnown RBP5.96□□□□□ -1.46
CDC4YFL009W IOC4Q04213 475 aa5.96□□□□□ -1.46
CDC4YFL009W MCM16Q12262 181 aa5.96□□□□□ -1.46
CDC4YFL009W TRM3Q07527 1436 aa5.96□□□□□ -1.46
CDC4YFL009W KRI1P42846 591 aaKnown RBP5.96□□□□□ -1.46
CDC4YFL009W ARO1P08566 1588 aaKnown RBP5.95□□□□□ -1.46
CDC4YFL009W SUI2P20459 304 aaKnown RBP5.95□□□□□ -1.46
CDC4YFL009W KNS1P32350 737 aaPredicted RBP5.95□□□□□ -1.46
CDC4YFL009W ARL1P38116 183 aaKnown RBP5.95□□□□□ -1.46
CDC4YFL009W SEN54Q02825 467 aaPredicted RBP5.95□□□□□ -1.46
CDC4YFL009W YPR084WQ06821 456 aa5.95□□□□□ -1.46
CDC4YFL009W TUB4P53378 473 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-HO13535 1793 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-DR5P0C2I2 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-DR6P0C2I3 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-LR2P0C2I5 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-LR3P0C2I6 1755 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W TY1B-PR1P0C2I9 1755 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W TY1B-PR2P0C2J0 1756 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-PR3P0C2J1 1755 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W TY1B-JR1P47098 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-ML2Q03434 1755 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W TY1B-ER1Q03612 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-ML1Q04711 1755 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W TY1B-GR2Q12269 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-OLQ12273 1755 aa5.94□□□□□ -1.46
CDC4YFL009W TY1B-PLQ12414 1755 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W NUP157P40064 1391 aaKnown RBP5.94□□□□□ -1.46
CDC4YFL009W ISF1P32488 338 aa5.94□□□□□ -1.46
CDC4YFL009W TAF5P38129 798 aa5.94□□□□□ -1.46
CDC4YFL009W SSF1P38789 453 aaPredicted RBP5.94□□□□□ -1.46
CDC4YFL009W YPR015CQ12531 247 aa5.93□□□□□ -1.46
CDC4YFL009W YDL206WQ12424 762 aa5.93□□□□□ -1.46
CDC4YFL009W CDC3P32457 520 aaKnown RBP5.92□□□□□ -1.46
CDC4YFL009W BUD20Q08004 166 aaPredicted RBP5.92□□□□□ -1.46
CDC4YFL009W TPS3P38426 1054 aaKnown RBP5.91□□□□□ -1.46
CDC4YFL009W APL6P46682 809 aa5.91□□□□□ -1.46
CDC4YFL009W YDL129WQ07555 291 aa5.91□□□□□ -1.46
CDC4YFL009W SPT2P06843 333 aaPredicted RBP5.91□□□□□ -1.46
CDC4YFL009W TCD1P38756 429 aa5.91□□□□□ -1.46
CDC4YFL009W RAD26P40352 1085 aa5.91□□□□□ -1.46
CDC4YFL009W ARH1P48360 493 aa5.91□□□□□ -1.46
CDC4YFL009W RPL34AP87262 121 aaPredicted RBP5.91□□□□□ -1.46
CDC4YFL009W HAP5Q02516 242 aa5.91□□□□□ -1.46
CDC4YFL009W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
CDC4YFL009W PAC1P39946 494 aaKnown RBP5.9□□□□□ -1.46
CDC4YFL009W PIL1P53252 339 aaKnown RBP5.9□□□□□ -1.46
CDC4YFL009W FIG4P42837 879 aa5.9□□□□□ -1.47
CDC4YFL009W EMP47P43555 445 aa5.9□□□□□ -1.47
CDC4YFL009W MPP10P47083 593 aaKnown RBP5.89□□□□□ -1.47
CDC4YFL009W TY1B-BRQ12193 1756 aa5.89□□□□□ -1.47
CDC4YFL009W TY1B-GR3Q12316 1755 aa5.89□□□□□ -1.47
CDC4YFL009W TY1B-ORQ92393 1755 aa5.89□□□□□ -1.47
CDC4YFL009W PDR12Q02785 1511 aa5.89□□□□□ -1.47
CDC4YFL009W RAD2P07276 1031 aa5.88□□□□□ -1.47
CDC4YFL009W BYE1P36106 594 aa5.88□□□□□ -1.47
CDC4YFL009W TPM2P40414 161 aa5.88□□□□□ -1.47
CDC4YFL009W MSH4P40965 878 aaPredicted RBP5.88□□□□□ -1.47
CDC4YFL009W ECM23Q02710 187 aa5.88□□□□□ -1.47
CDC4YFL009W FRA1Q07825 749 aa5.88□□□□□ -1.47
CDC4YFL009W NCR1Q12200 1170 aa5.88□□□□□ -1.47
CDC4YFL009W CIN4P39110 191 aa5.88□□□□□ -1.47
CDC4YFL009W RPA14P50106 137 aa5.88□□□□□ -1.47
CDC4YFL009W VPS4P52917 437 aa5.88□□□□□ -1.47
CDC4YFL009W YPR097WQ06839 1073 aa5.88□□□□□ -1.47
CDC4YFL009W TY1B-JR2P47100 1755 aaKnown RBP5.88□□□□□ -1.47
CDC4YFL009W TY1B-ER2Q03619 1755 aa5.88□□□□□ -1.47
CDC4YFL009W TY1B-MR1Q04214 1755 aa5.88□□□□□ -1.47
CDC4YFL009W TY1B-MR2Q04670 1755 aaKnown RBP5.88□□□□□ -1.47
CDC4YFL009W TY1B-LR1Q12088 1755 aaKnown RBP5.88□□□□□ -1.47
CDC4YFL009W TY1B-NL1Q12112 1755 aa5.88□□□□□ -1.47
CDC4YFL009W TY1B-GR1Q12141 1755 aa5.88□□□□□ -1.47
CDC4YFL009W TY1B-BLQ12490 1755 aa5.88□□□□□ -1.47
CDC4YFL009W LTE1P07866 1435 aa5.87□□□□□ -1.47
CDC4YFL009W TRK1P12685 1235 aa5.87□□□□□ -1.47
CDC4YFL009W KTR7P40504 517 aa5.87□□□□□ -1.47
CDC4YFL009W HAT1Q12341 374 aa5.87□□□□□ -1.47
CDC4YFL009W PDC1P06169 563 aaKnown RBP5.87□□□□□ -1.47
CDC4YFL009W FKH1P40466 484 aa5.87□□□□□ -1.47
CDC4YFL009W RAD9P14737 1309 aa5.86□□□□□ -1.47
CDC4YFL009W SCT1P32784 759 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms