RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C ATE1P16639 503 aa8.36□□□□□ -1.07
PRB1YEL060C CPS1P27614 576 aa8.36□□□□□ -1.07
PRB1YEL060C NUG1P40010 520 aaKnown RBP8.36□□□□□ -1.07
PRB1YEL060C RNT1Q02555 471 aa8.36□□□□□ -1.07
PRB1YEL060C DUR1,2P32528 1835 aaKnown RBP8.36□□□□□ -1.07
PRB1YEL060C DPS1P04802 557 aaKnown RBP8.35□□□□□ -1.07
PRB1YEL060C FRS2P15625 503 aaKnown RBP8.35□□□□□ -1.07
PRB1YEL060C MBR1P23493 339 aa8.35□□□□□ -1.07
PRB1YEL060C BDP1P46678 594 aa8.35□□□□□ -1.07
PRB1YEL060C TRS33Q99394 268 aa8.35□□□□□ -1.07
PRB1YEL060C RPS24AP0CX31 135 aaKnown RBP8.35□□□□□ -1.07
PRB1YEL060C RPS24BP0CX32 135 aaKnown RBP8.35□□□□□ -1.07
PRB1YEL060C DSN1P40568 576 aa8.35□□□□□ -1.07
PRB1YEL060C RAD24P32641 659 aa8.34□□□□□ -1.07
PRB1YEL060C PRX1P34227 261 aaKnown RBP8.34□□□□□ -1.07
PRB1YEL060C DEF1P35732 738 aaKnown RBP8.34□□□□□ -1.07
PRB1YEL060C MED8P38304 223 aa8.34□□□□□ -1.07
PRB1YEL060C PEX14P53112 341 aa8.34□□□□□ -1.07
PRB1YEL060C MRC1P25588 1096 aa8.33□□□□□ -1.08
PRB1YEL060C ECM1P39715 212 aa8.33□□□□□ -1.08
PRB1YEL060C RIA1P53893 1110 aa8.33□□□□□ -1.08
PRB1YEL060C NOP8Q08287 484 aaPredicted RBP8.33□□□□□ -1.08
PRB1YEL060C COQ4O13525 335 aa8.33□□□□□ -1.08
PRB1YEL060C YGR122WP53272 402 aa8.33□□□□□ -1.08
PRB1YEL060C MRS2Q01926 470 aa8.33□□□□□ -1.08
PRB1YEL060C MSB4Q12317 492 aa8.33□□□□□ -1.08
PRB1YEL060C SGD1Q06132 899 aa8.32□□□□□ -1.08
PRB1YEL060C TY1B-NL2Q99337 1749 aaKnown RBP8.32□□□□□ -1.08
PRB1YEL060C SPC110P32380 944 aa8.31□□□□□ -1.08
PRB1YEL060C AIM9P40053 627 aaKnown RBP8.31□□□□□ -1.08
PRB1YEL060C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
PRB1YEL060C PRP31P49704 494 aaPredicted RBP8.31□□□□□ -1.08
PRB1YEL060C SML1Q04964 104 aa8.31□□□□□ -1.08
PRB1YEL060C TTI1P36097 1038 aa8.31□□□□□ -1.08
PRB1YEL060C HGH1P48362 394 aaKnown RBP8.31□□□□□ -1.08
PRB1YEL060C YGL140CP53120 1219 aa8.31□□□□□ -1.08
PRB1YEL060C PRP43P53131 767 aaKnown RBP8.31□□□□□ -1.08
PRB1YEL060C ENV11P53246 860 aa8.31□□□□□ -1.08
PRB1YEL060C PET111P08468 800 aa8.3□□□□□ -1.08
PRB1YEL060C SWE1P32944 819 aa8.3□□□□□ -1.08
PRB1YEL060C AAP1P37898 856 aaKnown RBP8.3□□□□□ -1.08
PRB1YEL060C DDP1Q99321 188 aaKnown RBP8.3□□□□□ -1.08
PRB1YEL060C MSH1P25846 959 aa8.29□□□□□ -1.08
PRB1YEL060C CTH1P47976 325 aa8.29□□□□□ -1.08
PRB1YEL060C YGL082WP53155 381 aa8.29□□□□□ -1.08
PRB1YEL060C RIM20Q12033 661 aa8.29□□□□□ -1.08
PRB1YEL060C YKL068W-AQ3E826 78 aa8.29□□□□□ -1.08
PRB1YEL060C YOL087CQ99247 1116 aa8.29□□□□□ -1.08
PRB1YEL060C BOI2P39969 1040 aa8.29□□□□□ -1.08
PRB1YEL060C CTF18P49956 741 aa8.29□□□□□ -1.08
PRB1YEL060C YMR102CQ03177 834 aa8.29□□□□□ -1.08
PRB1YEL060C COG4Q06096 861 aa8.29□□□□□ -1.08
PRB1YEL060C TLG2Q08144 397 aa8.29□□□□□ -1.08
PRB1YEL060C RTT107P38850 1070 aa8.28□□□□□ -1.08
PRB1YEL060C VPS41P38959 992 aa8.28□□□□□ -1.08
PRB1YEL060C RMD1Q03441 430 aa8.28□□□□□ -1.08
PRB1YEL060C SWC3P31376 625 aa8.27□□□□□ -1.09
PRB1YEL060C TSR3Q12094 313 aaKnown RBP8.27□□□□□ -1.09
PRB1YEL060C ADE6P38972 1358 aaKnown RBP8.27□□□□□ -1.09
PRB1YEL060C CPA2P03965 1118 aaKnown RBP8.27□□□□□ -1.09
PRB1YEL060C RDS1P25611 832 aa8.27□□□□□ -1.09
PRB1YEL060C GIN4Q12263 1142 aa8.27□□□□□ -1.09
PRB1YEL060C GPA1P08539 472 aa8.26□□□□□ -1.09
PRB1YEL060C TPM1P17536 199 aaKnown RBP8.26□□□□□ -1.09
PRB1YEL060C HSP104P31539 908 aaKnown RBP8.26□□□□□ -1.09
PRB1YEL060C ECM21P38167 1117 aaKnown RBP8.26□□□□□ -1.09
PRB1YEL060C SRC1Q03707 834 aa8.26□□□□□ -1.09
PRB1YEL060C AOS1Q06624 347 aa8.26□□□□□ -1.09
PRB1YEL060C YOL057WQ08225 711 aa8.26□□□□□ -1.09
PRB1YEL060C MRP7P12687 371 aa8.25□□□□□ -1.09
PRB1YEL060C GDT1P38301 280 aaPredicted RBP8.25□□□□□ -1.09
PRB1YEL060C RRM3P38766 723 aa8.25□□□□□ -1.09
PRB1YEL060C CTI6Q08923 506 aa8.25□□□□□ -1.09
PRB1YEL060C PSH1Q12161 406 aa8.25□□□□□ -1.09
PRB1YEL060C YER130CP39959 443 aa8.25□□□□□ -1.09
PRB1YEL060C ENT3P47160 408 aa8.25□□□□□ -1.09
PRB1YEL060C YPL150WQ12152 901 aa8.25□□□□□ -1.09
PRB1YEL060C SPO22P40511 975 aa8.24□□□□□ -1.09
PRB1YEL060C NSE3Q05541 303 aa8.24□□□□□ -1.09
PRB1YEL060C BRE1Q07457 700 aaKnown RBP8.24□□□□□ -1.09
PRB1YEL060C ELG1Q12050 791 aa8.24□□□□□ -1.09
PRB1YEL060C PDR18P53756 1333 aa8.23□□□□□ -1.09
PRB1YEL060C BRL1P38770 471 aa8.23□□□□□ -1.09
PRB1YEL060C FYV10P40492 516 aa8.23□□□□□ -1.09
PRB1YEL060C MVP1P40959 511 aaKnown RBP8.23□□□□□ -1.09
PRB1YEL060C TFG2P41896 400 aaPredicted RBP8.23□□□□□ -1.09
PRB1YEL060C MRPS35P53292 345 aa8.23□□□□□ -1.09
PRB1YEL060C WAR1Q03631 944 aa8.23□□□□□ -1.09
PRB1YEL060C NCB2Q92317 146 aa8.23□□□□□ -1.09
PRB1YEL060C OSW7P43611 510 aa8.23□□□□□ -1.09
PRB1YEL060C VMS1Q04311 632 aaKnown RBP8.23□□□□□ -1.09
PRB1YEL060C GYL1Q04322 720 aa8.23□□□□□ -1.09
PRB1YEL060C YRF1-2P40105 1681 aa8.22□□□□□ -1.09
PRB1YEL060C UGA3P26370 528 aa8.22□□□□□ -1.09
PRB1YEL060C MAL33P38157 468 aa8.22□□□□□ -1.09
PRB1YEL060C BBC1P47068 1157 aa8.22□□□□□ -1.09
PRB1YEL060C RPN7Q06103 429 aaKnown RBP8.22□□□□□ -1.09
PRB1YEL060C YDR306CQ06640 478 aa8.22□□□□□ -1.09
PRB1YEL060C PSK2Q08217 1101 aa8.22□□□□□ -1.09
PRB1YEL060C RAD4P14736 754 aa8.21□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms