RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W CTH1P47976 325 aa8.71□□□□□ -1.01
YRF1-1YDR545W MPE1P35728 441 aaKnown RBP8.71□□□□□ -1.02
YRF1-1YDR545W TY4A-HQ6Q5P6 413 aa8.71□□□□□ -1.02
YRF1-1YDR545W APT1P49435 187 aaKnown RBP8.71□□□□□ -1.02
YRF1-1YDR545W HIM1Q06674 414 aa8.71□□□□□ -1.02
YRF1-1YDR545W LEU2P04173 364 aaPredicted RBP8.7□□□□□ -1.02
YRF1-1YDR545W ENT3P47160 408 aa8.7□□□□□ -1.02
YRF1-1YDR545W YMR102CQ03177 834 aa8.7□□□□□ -1.02
YRF1-1YDR545W HXT17P53631 564 aa8.69□□□□□ -1.02
YRF1-1YDR545W RIA1P53893 1110 aa8.69□□□□□ -1.02
YRF1-1YDR545W SML1Q04964 104 aa8.69□□□□□ -1.02
YRF1-1YDR545W YKL068W-AQ3E826 78 aa8.69□□□□□ -1.02
YRF1-1YDR545W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
YRF1-1YDR545W SEC39Q12745 709 aa8.69□□□□□ -1.02
YRF1-1YDR545W EIS1Q05050 843 aaKnown RBP8.69□□□□□ -1.02
YRF1-1YDR545W HAP1P0CE41 1502 aa8.69□□□□□ -1.02
YRF1-1YDR545W RMD1Q03441 430 aa8.68□□□□□ -1.02
YRF1-1YDR545W RIM101P33400 625 aa8.68□□□□□ -1.02
YRF1-1YDR545W MGA2P40578 1113 aa8.68□□□□□ -1.02
YRF1-1YDR545W SRP54P20424 541 aaKnown RBP8.68□□□□□ -1.02
YRF1-1YDR545W RRB1Q04225 511 aaKnown RBP8.68□□□□□ -1.02
YRF1-1YDR545W SMC6Q12749 1114 aa8.68□□□□□ -1.02
YRF1-1YDR545W ATE1P16639 503 aa8.68□□□□□ -1.02
YRF1-1YDR545W SRC1Q03707 834 aa8.68□□□□□ -1.02
YRF1-1YDR545W REI1P38344 393 aaPredicted RBP8.67□□□□□ -1.02
YRF1-1YDR545W GAS4Q08271 471 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-HO13535 1793 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-DR5P0C2I2 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-DR6P0C2I3 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-LR2P0C2I5 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-LR3P0C2I6 1755 aaKnown RBP8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-PR1P0C2I9 1755 aaKnown RBP8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-PR2P0C2J0 1756 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-PR3P0C2J1 1755 aaKnown RBP8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-JR1P47098 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-ML2Q03434 1755 aaKnown RBP8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-ER1Q03612 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-ML1Q04711 1755 aaKnown RBP8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-GR2Q12269 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-OLQ12273 1755 aa8.67□□□□□ -1.02
YRF1-1YDR545W TY1B-PLQ12414 1755 aaKnown RBP8.67□□□□□ -1.02
YRF1-1YDR545W RRP1P35178 278 aaPredicted RBP8.67□□□□□ -1.02
YRF1-1YDR545W VMR1P38735 1592 aa8.67□□□□□ -1.02
YRF1-1YDR545W COG4Q06096 861 aa8.67□□□□□ -1.02
YRF1-1YDR545W YOL087CQ99247 1116 aa8.67□□□□□ -1.02
YRF1-1YDR545W CCT4P39078 528 aaKnown RBP8.66□□□□□ -1.02
YRF1-1YDR545W SRT1Q03175 343 aa8.66□□□□□ -1.02
YRF1-1YDR545W PSK2Q08217 1101 aa8.66□□□□□ -1.02
YRF1-1YDR545W ISW2Q08773 1120 aa8.66□□□□□ -1.02
YRF1-1YDR545W AKL1P38080 1108 aaKnown RBP8.66□□□□□ -1.02
YRF1-1YDR545W SPO19Q03029 223 aa8.66□□□□□ -1.02
YRF1-1YDR545W YPL225WQ08971 146 aaKnown RBP8.65□□□□□ -1.02
YRF1-1YDR545W PDR18P53756 1333 aa8.65□□□□□ -1.02
YRF1-1YDR545W BMS1Q08965 1183 aaKnown RBP8.65□□□□□ -1.02
YRF1-1YDR545W TSR3Q12094 313 aaKnown RBP8.65□□□□□ -1.02
YRF1-1YDR545W NTE1Q04958 1679 aa8.65□□□□□ -1.02
YRF1-1YDR545W NFU1P32860 256 aa8.65□□□□□ -1.02
YRF1-1YDR545W RCM1P53972 490 aa8.65□□□□□ -1.02
YRF1-1YDR545W ELM1P32801 640 aa8.65□□□□□ -1.03
YRF1-1YDR545W SQT1P35184 431 aa8.65□□□□□ -1.03
YRF1-1YDR545W YNL050CP53952 270 aa8.64□□□□□ -1.03
YRF1-1YDR545W HCR1Q05775 265 aaKnown RBP8.64□□□□□ -1.03
YRF1-1YDR545W DSD1P53095 428 aa8.64□□□□□ -1.03
YRF1-1YDR545W IML1P47170 1584 aa8.64□□□□□ -1.03
YRF1-1YDR545W DPS1P04802 557 aaKnown RBP8.64□□□□□ -1.03
YRF1-1YDR545W SAP1P39955 897 aaKnown RBP8.64□□□□□ -1.03
YRF1-1YDR545W BUD6P41697 788 aa8.64□□□□□ -1.03
YRF1-1YDR545W MTR4P47047 1073 aaKnown RBP8.64□□□□□ -1.03
YRF1-1YDR545W OSH2Q12451 1283 aa8.64□□□□□ -1.03
YRF1-1YDR545W KAR3P17119 729 aa8.63□□□□□ -1.03
YRF1-1YDR545W SAP190P36123 1033 aa8.63□□□□□ -1.03
YRF1-1YDR545W CTF18P49956 741 aa8.63□□□□□ -1.03
YRF1-1YDR545W SSL2Q00578 843 aa8.63□□□□□ -1.03
YRF1-1YDR545W ESF1Q06344 628 aaKnown RBP8.63□□□□□ -1.03
YRF1-1YDR545W YOL098CQ12496 1037 aa8.63□□□□□ -1.03
YRF1-1YDR545W HGH1P48362 394 aaKnown RBP8.63□□□□□ -1.03
YRF1-1YDR545W BTN2P53286 410 aa8.63□□□□□ -1.03
YRF1-1YDR545W NSE3Q05541 303 aa8.63□□□□□ -1.03
YRF1-1YDR545W CDC15P27636 974 aa8.63□□□□□ -1.03
YRF1-1YDR545W SIC1P38634 284 aa8.63□□□□□ -1.03
YRF1-1YDR545W BRE1Q07457 700 aaKnown RBP8.62□□□□□ -1.03
YRF1-1YDR545W TRL1P09880 827 aaKnown RBP8.62□□□□□ -1.03
YRF1-1YDR545W MVP1P40959 511 aaKnown RBP8.62□□□□□ -1.03
YRF1-1YDR545W STM1P39015 273 aaKnown RBP8.62□□□□□ -1.03
YRF1-1YDR545W RPO26P20435 155 aa8.61□□□□□ -1.03
YRF1-1YDR545W DPB3P27344 201 aa8.61□□□□□ -1.03
YRF1-1YDR545W YKT6P36015 200 aaKnown RBP8.61□□□□□ -1.03
YRF1-1YDR545W LCB5Q06147 687 aaKnown RBP8.61□□□□□ -1.03
YRF1-1YDR545W RRP43P25359 394 aaPredicted RBP8.61□□□□□ -1.03
YRF1-1YDR545W BYE1P36106 594 aa8.61□□□□□ -1.03
YRF1-1YDR545W ILV3P39522 585 aaKnown RBP8.61□□□□□ -1.03
YRF1-1YDR545W YKE2P52553 114 aa8.61□□□□□ -1.03
YRF1-1YDR545W YER130CP39959 443 aa8.61□□□□□ -1.03
YRF1-1YDR545W SEC26P41810 973 aaKnown RBP8.61□□□□□ -1.03
YRF1-1YDR545W YEL043WP32618 956 aa8.61□□□□□ -1.03
YRF1-1YDR545W YMR124WP39523 943 aaKnown RBP8.61□□□□□ -1.03
YRF1-1YDR545W FYV8P46949 817 aaKnown RBP8.61□□□□□ -1.03
YRF1-1YDR545W FRS2P15625 503 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W CDC60P26637 1090 aaKnown RBP8.6□□□□□ -1.03
YRF1-1YDR545W SPO22P40511 975 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms