RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C HDA3Q06623 655 aa6.77□□□□□ -1.33
FCF1YDR339C SUP45P12385 437 aaKnown RBP6.76□□□□□ -1.33
FCF1YDR339C LSB3P43603 459 aaKnown RBP6.76□□□□□ -1.33
FCF1YDR339C DIT1P21623 536 aa6.75□□□□□ -1.33
FCF1YDR339C ALA1P40825 983 aaKnown RBP6.75□□□□□ -1.33
FCF1YDR339C YFL066CP43538 392 aa6.75□□□□□ -1.33
FCF1YDR339C KRE33P53914 1056 aaKnown RBP6.75□□□□□ -1.33
FCF1YDR339C ADE12P80210 433 aaKnown RBP6.75□□□□□ -1.33
FCF1YDR339C AHP1P38013 176 aaKnown RBP6.74□□□□□ -1.33
FCF1YDR339C SLX8P40072 274 aa6.74□□□□□ -1.33
FCF1YDR339C SYT1Q06836 1226 aa6.74□□□□□ -1.33
FCF1YDR339C PHM7Q12252 991 aa6.74□□□□□ -1.33
FCF1YDR339C SUM1P46676 1062 aa6.73□□□□□ -1.33
FCF1YDR339C AI1P03875 834 aa6.72□□□□□ -1.33
FCF1YDR339C YJL007CP47080 104 aa6.72□□□□□ -1.33
FCF1YDR339C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
FCF1YDR339C SHM1P37292 490 aaPredicted RBP6.71□□□□□ -1.34
FCF1YDR339C YPP1P46951 817 aa6.7□□□□□ -1.34
FCF1YDR339C JJJ2P46997 583 aa6.7□□□□□ -1.34
FCF1YDR339C UTP13Q05946 817 aaKnown RBP6.7□□□□□ -1.34
FCF1YDR339C RDS2P19541 446 aaKnown RBP6.69□□□□□ -1.34
FCF1YDR339C IRE1P32361 1115 aa6.69□□□□□ -1.34
FCF1YDR339C ATG3P40344 310 aa6.69□□□□□ -1.34
FCF1YDR339C SBE2P42223 864 aaKnown RBP6.68□□□□□ -1.34
FCF1YDR339C RIM21P48565 533 aa6.68□□□□□ -1.34
FCF1YDR339C YDR461C-AQ2V2P7 80 aa6.67□□□□□ -1.34
FCF1YDR339C SWI5P08153 709 aa6.66□□□□□ -1.34
FCF1YDR339C PSH1Q12161 406 aa6.65□□□□□ -1.34
FCF1YDR339C MRPL16P38064 232 aa6.64□□□□□ -1.35
FCF1YDR339C RPS31P05759 152 aaKnown RBP6.63□□□□□ -1.35
FCF1YDR339C PDC6P26263 563 aaKnown RBP6.63□□□□□ -1.35
FCF1YDR339C AIM9P40053 627 aaKnown RBP6.63□□□□□ -1.35
FCF1YDR339C TDA6Q06466 467 aa6.63□□□□□ -1.35
FCF1YDR339C FPS1P23900 669 aa6.62□□□□□ -1.35
FCF1YDR339C BIM1P40013 344 aa6.62□□□□□ -1.35
FCF1YDR339C CCT8P47079 568 aaKnown RBP6.62□□□□□ -1.35
FCF1YDR339C YPQ2Q06328 317 aa6.62□□□□□ -1.35
FCF1YDR339C ENO1P00924 437 aaKnown RBP6.61□□□□□ -1.35
FCF1YDR339C ATG32P40458 529 aa6.61□□□□□ -1.35
FCF1YDR339C YNL165WP53891 406 aa6.6□□□□□ -1.35
FCF1YDR339C MRX10Q05648 414 aa6.6□□□□□ -1.35
FCF1YDR339C STB3Q12427 513 aa6.6□□□□□ -1.35
FCF1YDR339C YPR053CQ6Q5F3 151 aa6.6□□□□□ -1.35
FCF1YDR339C GPM1P00950 247 aaKnown RBP6.59□□□□□ -1.35
FCF1YDR339C RPS6AP0CX37 236 aaKnown RBP6.59□□□□□ -1.35
FCF1YDR339C RPS6BP0CX38 236 aaPredicted RBP6.59□□□□□ -1.35
FCF1YDR339C PDI1P17967 522 aaKnown RBP6.59□□□□□ -1.35
FCF1YDR339C NTH2P35172 780 aa6.59□□□□□ -1.35
FCF1YDR339C YNR014WP53719 212 aa6.59□□□□□ -1.35
FCF1YDR339C TIF1P10081 395 aaKnown RBP6.58□□□□□ -1.36
FCF1YDR339C RTG2P32608 588 aaKnown RBP6.57□□□□□ -1.36
FCF1YDR339C SPR3P41901 512 aa6.57□□□□□ -1.36
FCF1YDR339C YMR187CQ03236 431 aa6.57□□□□□ -1.36
FCF1YDR339C SKN7P38889 622 aa6.55□□□□□ -1.36
FCF1YDR339C ALD2P47771 506 aa6.54□□□□□ -1.36
FCF1YDR339C LEU1P07264 779 aaKnown RBP6.53□□□□□ -1.36
FCF1YDR339C BOI2P39969 1040 aa6.53□□□□□ -1.36
FCF1YDR339C YFL034WP43564 1073 aa6.53□□□□□ -1.36
FCF1YDR339C YCK2P23292 546 aaKnown RBP6.52□□□□□ -1.37
FCF1YDR339C KTR7P40504 517 aa6.52□□□□□ -1.37
FCF1YDR339C TY1A-DR2Q03964 440 aaKnown RBP6.52□□□□□ -1.37
FCF1YDR339C TSC13Q99190 310 aa6.52□□□□□ -1.37
FCF1YDR339C Q0182Q9ZZW1 134 aa6.52□□□□□ -1.37
FCF1YDR339C PDC5P16467 563 aaKnown RBP6.51□□□□□ -1.37
FCF1YDR339C MLF3P32047 452 aa6.51□□□□□ -1.37
FCF1YDR339C PEP12P32854 288 aa6.51□□□□□ -1.37
FCF1YDR339C MCX1P38323 520 aaPredicted RBP6.51□□□□□ -1.37
FCF1YDR339C SLN1P39928 1220 aaPredicted RBP6.51□□□□□ -1.37
FCF1YDR339C RPL34BP40525 121 aaKnown RBP6.51□□□□□ -1.37
FCF1YDR339C MSC7P38694 644 aa6.49□□□□□ -1.37
FCF1YDR339C SBP1P10080 294 aaKnown RBP6.48□□□□□ -1.37
FCF1YDR339C MCM1P11746 286 aa6.48□□□□□ -1.37
FCF1YDR339C RGP1P16664 663 aa6.48□□□□□ -1.37
FCF1YDR339C KNS1P32350 737 aaPredicted RBP6.48□□□□□ -1.37
FCF1YDR339C YTA6P40328 754 aa6.48□□□□□ -1.37
FCF1YDR339C CYT1P07143 309 aa6.47□□□□□ -1.37
FCF1YDR339C ACS2P52910 683 aaKnown RBP6.47□□□□□ -1.37
FCF1YDR339C NRD1P53617 575 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
FCF1YDR339C MCA1Q08601 432 aa6.47□□□□□ -1.37
FCF1YDR339C YDR215CQ12240 137 aa6.47□□□□□ -1.37
FCF1YDR339C MET1P36150 593 aa6.44□□□□□ -1.38
FCF1YDR339C MTO1P53070 669 aa6.44□□□□□ -1.38
FCF1YDR339C PRY1P47032 299 aa6.43□□□□□ -1.38
FCF1YDR339C AMN1P38285 549 aaPredicted RBP6.42□□□□□ -1.38
FCF1YDR339C HGH1P48362 394 aaKnown RBP6.42□□□□□ -1.38
FCF1YDR339C PHO87P25360 923 aa6.41□□□□□ -1.38
FCF1YDR339C TAT1P38085 619 aa6.39□□□□□ -1.39
FCF1YDR339C LSB6P42951 607 aa6.39□□□□□ -1.39
FCF1YDR339C HAP4P14064 554 aa6.38□□□□□ -1.39
FCF1YDR339C PRK1P40494 810 aa6.38□□□□□ -1.39
FCF1YDR339C ROM1P53046 1155 aa6.38□□□□□ -1.39
FCF1YDR339C PGM2P37012 569 aaKnown RBP6.37□□□□□ -1.39
FCF1YDR339C HXT5P38695 592 aa6.37□□□□□ -1.39
FCF1YDR339C YNR040WP53736 256 aa6.37□□□□□ -1.39
FCF1YDR339C RPP1AP05318 106 aaPredicted RBP6.36□□□□□ -1.39
FCF1YDR339C KAP122P32767 1081 aa6.36□□□□□ -1.39
FCF1YDR339C CUS1Q02554 436 aaPredicted RBP6.36□□□□□ -1.39
FCF1YDR339C GAS4Q08271 471 aa6.36□□□□□ -1.39
FCF1YDR339C GAL2P13181 574 aa6.35□□□□□ -1.39
FCF1YDR339C UBP1P25037 809 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms