RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W ARG8P18544 423 aa8.47□□□□□ -1.05
CDC7YDL017W VPS24P36095 224 aaKnown RBP8.47□□□□□ -1.05
CDC7YDL017W PHM7Q12252 991 aa8.47□□□□□ -1.05
CDC7YDL017W SSF1P38789 453 aaPredicted RBP8.46□□□□□ -1.05
CDC7YDL017W HXT13P39924 564 aa8.46□□□□□ -1.05
CDC7YDL017W MDG1P53885 366 aa8.46□□□□□ -1.05
CDC7YDL017W LSP1Q12230 341 aaKnown RBP8.46□□□□□ -1.05
CDC7YDL017W NCB2Q92317 146 aa8.46□□□□□ -1.05
CDC7YDL017W DCD1P06773 312 aa8.45□□□□□ -1.06
CDC7YDL017W VAS1P07806 1104 aaKnown RBP8.45□□□□□ -1.06
CDC7YDL017W ROX1P25042 368 aa8.45□□□□□ -1.06
CDC7YDL017W ECM21P38167 1117 aaKnown RBP8.45□□□□□ -1.06
CDC7YDL017W HXT17P53631 564 aa8.45□□□□□ -1.06
CDC7YDL017W NOT3P06102 836 aaKnown RBP8.44□□□□□ -1.06
CDC7YDL017W DJP1P40564 432 aa8.44□□□□□ -1.06
CDC7YDL017W HXT10P43581 546 aa8.44□□□□□ -1.06
CDC7YDL017W SRS2P12954 1174 aa8.44□□□□□ -1.06
CDC7YDL017W ITC1P53125 1264 aa8.43□□□□□ -1.06
CDC7YDL017W PDR18P53756 1333 aa8.42□□□□□ -1.06
CDC7YDL017W YGL242CP53066 181 aa8.42□□□□□ -1.06
CDC7YDL017W FCP1Q03254 732 aa8.42□□□□□ -1.06
CDC7YDL017W PKH1Q03407 766 aa8.42□□□□□ -1.06
CDC7YDL017W MTC5Q03897 1148 aa8.42□□□□□ -1.06
CDC7YDL017W PSH1Q12161 406 aa8.42□□□□□ -1.06
CDC7YDL017W MSP1P28737 362 aa8.41□□□□□ -1.06
CDC7YDL017W KTR3P38130 404 aaPredicted RBP8.41□□□□□ -1.06
CDC7YDL017W TEA1P47988 759 aa8.41□□□□□ -1.06
CDC7YDL017W MLC1P53141 149 aa8.41□□□□□ -1.06
CDC7YDL017W ALO1P54783 526 aaKnown RBP8.41□□□□□ -1.06
CDC7YDL017W TRL1P09880 827 aaKnown RBP8.4□□□□□ -1.06
CDC7YDL017W YIL055CP40523 627 aaKnown RBP8.4□□□□□ -1.06
CDC7YDL017W MRPS35P53292 345 aa8.4□□□□□ -1.06
CDC7YDL017W RMD1Q03441 430 aa8.4□□□□□ -1.06
CDC7YDL017W BRE1Q07457 700 aaKnown RBP8.4□□□□□ -1.06
CDC7YDL017W LAM6Q08001 693 aa8.4□□□□□ -1.06
CDC7YDL017W RIM15P43565 1770 aa8.4□□□□□ -1.06
CDC7YDL017W AAP1P37898 856 aaKnown RBP8.39□□□□□ -1.07
CDC7YDL017W YGL082WP53155 381 aa8.39□□□□□ -1.07
CDC7YDL017W RIM20Q12033 661 aa8.39□□□□□ -1.07
CDC7YDL017W TSR3Q12094 313 aaKnown RBP8.39□□□□□ -1.07
CDC7YDL017W RNR2P09938 399 aaKnown RBP8.39□□□□□ -1.07
CDC7YDL017W FPR4Q06205 392 aaPredicted RBP8.39□□□□□ -1.07
CDC7YDL017W MSB4Q12317 492 aa8.39□□□□□ -1.07
CDC7YDL017W SUP35P05453 685 aaKnown RBP8.38□□□□□ -1.07
CDC7YDL017W SLA1P32790 1244 aa8.38□□□□□ -1.07
CDC7YDL017W NYV1Q12255 253 aa8.38□□□□□ -1.07
CDC7YDL017W PRP40P33203 583 aaKnown RBP8.37□□□□□ -1.07
CDC7YDL017W SER1P33330 395 aaKnown RBP8.37□□□□□ -1.07
CDC7YDL017W RPN11P43588 306 aaKnown RBP8.37□□□□□ -1.07
CDC7YDL017W NPA3P47122 385 aa8.37□□□□□ -1.07
CDC7YDL017W GRE2Q12068 342 aaKnown RBP8.37□□□□□ -1.07
CDC7YDL017W GYP5Q12344 894 aa8.37□□□□□ -1.07
CDC7YDL017W SAC3P46674 1301 aa8.37□□□□□ -1.07
CDC7YDL017W VPS20Q04272 221 aa8.36□□□□□ -1.07
CDC7YDL017W SSK22P25390 1331 aaPredicted RBP8.36□□□□□ -1.07
CDC7YDL017W KTR1P27810 393 aaKnown RBP8.35□□□□□ -1.07
CDC7YDL017W SLN1P39928 1220 aaPredicted RBP8.35□□□□□ -1.07
CDC7YDL017W PIB2P53191 635 aa8.35□□□□□ -1.07
CDC7YDL017W UBP16Q02863 499 aa8.35□□□□□ -1.07
CDC7YDL017W AI2P03876 854 aa8.34□□□□□ -1.07
CDC7YDL017W ARL1P38116 183 aaKnown RBP8.34□□□□□ -1.07
CDC7YDL017W NPR2P39923 615 aa8.34□□□□□ -1.07
CDC7YDL017W EPS1P40557 701 aa8.34□□□□□ -1.07
CDC7YDL017W HAP5Q02516 242 aa8.34□□□□□ -1.07
CDC7YDL017W SNU66Q12420 587 aaPredicted RBP8.34□□□□□ -1.07
CDC7YDL017W DUR1,2P32528 1835 aaKnown RBP8.34□□□□□ -1.07
CDC7YDL017W SEC18P18759 758 aaKnown RBP8.34□□□□□ -1.08
CDC7YDL017W SPT21P35209 758 aa8.34□□□□□ -1.08
CDC7YDL017W BDH2P39713 417 aa8.34□□□□□ -1.08
CDC7YDL017W AIM9P40053 627 aaKnown RBP8.34□□□□□ -1.08
CDC7YDL017W YJL181WP46987 611 aa8.34□□□□□ -1.08
CDC7YDL017W RPN7Q06103 429 aaKnown RBP8.33□□□□□ -1.08
CDC7YDL017W HAT1Q12341 374 aa8.33□□□□□ -1.08
CDC7YDL017W YNL193WP53870 558 aa8.32□□□□□ -1.08
CDC7YDL017W UTP10P42945 1769 aaKnown RBP8.32□□□□□ -1.08
CDC7YDL017W ADR1P07248 1323 aa8.31□□□□□ -1.08
CDC7YDL017W BIK1P11709 440 aa8.31□□□□□ -1.08
CDC7YDL017W OSH3P38713 996 aaKnown RBP8.31□□□□□ -1.08
CDC7YDL017W STM1P39015 273 aaKnown RBP8.31□□□□□ -1.08
CDC7YDL017W HST1P53685 503 aa8.31□□□□□ -1.08
CDC7YDL017W COG8Q04632 607 aa8.31□□□□□ -1.08
CDC7YDL017W HRQ1Q05549 1077 aa8.31□□□□□ -1.08
CDC7YDL017W KNS1P32350 737 aaPredicted RBP8.3□□□□□ -1.08
CDC7YDL017W PBY1P38254 753 aa8.3□□□□□ -1.08
CDC7YDL017W SPO22P40511 975 aa8.3□□□□□ -1.08
CDC7YDL017W KRI1P42846 591 aaKnown RBP8.3□□□□□ -1.08
CDC7YDL017W HYR1P40581 163 aaKnown RBP8.29□□□□□ -1.08
CDC7YDL017W YMR074CQ04773 145 aa8.29□□□□□ -1.08
CDC7YDL017W TPM1P17536 199 aaKnown RBP8.29□□□□□ -1.08
CDC7YDL017W OPI1P21957 404 aa8.29□□□□□ -1.08
CDC7YDL017W CIR1P42940 261 aa8.29□□□□□ -1.08
CDC7YDL017W YPR148CQ06523 435 aa8.29□□□□□ -1.08
CDC7YDL017W POM152P39685 1337 aa8.28□□□□□ -1.08
CDC7YDL017W RPL19AP0CX82 189 aaKnown RBP8.28□□□□□ -1.08
CDC7YDL017W RPL19BP0CX83 189 aaPredicted RBP8.28□□□□□ -1.08
CDC7YDL017W CWH41P53008 833 aa8.28□□□□□ -1.08
CDC7YDL017W RAT1Q02792 1006 aaKnown RBP8.28□□□□□ -1.08
CDC7YDL017W BUG1Q12191 341 aa8.28□□□□□ -1.08
CDC7YDL017W GLN1P32288 370 aaKnown RBP8.27□□□□□ -1.09
CDC7YDL017W BBC1P47068 1157 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms