RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W MDG1P53885 366 aa9.37□□□□□ -0.91
ABP1YCR088W AAP1P37898 856 aaKnown RBP9.36□□□□□ -0.91
ABP1YCR088W SWI1P09547 1314 aa9.36□□□□□ -0.91
ABP1YCR088W MCM2P29469 868 aa9.35□□□□□ -0.91
ABP1YCR088W SPT21P35209 758 aa9.35□□□□□ -0.91
ABP1YCR088W ECM21P38167 1117 aaKnown RBP9.35□□□□□ -0.91
ABP1YCR088W RIM20Q12033 661 aa9.35□□□□□ -0.91
ABP1YCR088W HGH1P48362 394 aaKnown RBP9.35□□□□□ -0.91
ABP1YCR088W PIL1P53252 339 aaKnown RBP9.35□□□□□ -0.91
ABP1YCR088W APC11Q12157 165 aa9.35□□□□□ -0.91
ABP1YCR088W TCB1Q12466 1186 aa9.35□□□□□ -0.91
ABP1YCR088W CST6P40535 587 aa9.34□□□□□ -0.91
ABP1YCR088W HXT10P43581 546 aa9.34□□□□□ -0.91
ABP1YCR088W MRPS35P53292 345 aa9.34□□□□□ -0.91
ABP1YCR088W DNM1P54861 757 aa9.34□□□□□ -0.91
ABP1YCR088W FPR4Q06205 392 aaPredicted RBP9.34□□□□□ -0.91
ABP1YCR088W PDR18P53756 1333 aa9.33□□□□□ -0.92
ABP1YCR088W LPD1P09624 499 aaKnown RBP9.33□□□□□ -0.92
ABP1YCR088W MIF2P35201 549 aa9.33□□□□□ -0.92
ABP1YCR088W DID4P36108 232 aa9.33□□□□□ -0.92
ABP1YCR088W KTR3P38130 404 aaPredicted RBP9.33□□□□□ -0.92
ABP1YCR088W AIM9P40053 627 aaKnown RBP9.33□□□□□ -0.92
ABP1YCR088W KRI1P42846 591 aaKnown RBP9.33□□□□□ -0.92
ABP1YCR088W KEX1P09620 729 aa9.32□□□□□ -0.92
ABP1YCR088W UBP12P39538 1254 aa9.32□□□□□ -0.92
ABP1YCR088W YRF1-3P0CX14 1859 aa9.32□□□□□ -0.92
ABP1YCR088W YRF1-7P0CX15 1859 aa9.32□□□□□ -0.92
ABP1YCR088W YRF1-6P53819 1859 aa9.32□□□□□ -0.92
ABP1YCR088W MBR1P23493 339 aa9.32□□□□□ -0.92
ABP1YCR088W SLA1P32790 1244 aa9.32□□□□□ -0.92
ABP1YCR088W LEO1P38439 464 aa9.32□□□□□ -0.92
ABP1YCR088W HYR1P40581 163 aaKnown RBP9.32□□□□□ -0.92
ABP1YCR088W CWH41P53008 833 aa9.31□□□□□ -0.92
ABP1YCR088W ADE16P54113 591 aaKnown RBP9.31□□□□□ -0.92
ABP1YCR088W ALO1P54783 526 aaKnown RBP9.31□□□□□ -0.92
ABP1YCR088W PIB2P53191 635 aa9.3□□□□□ -0.92
ABP1YCR088W VPS64Q03944 604 aa9.3□□□□□ -0.92
ABP1YCR088W PEX19Q07418 342 aa9.3□□□□□ -0.92
ABP1YCR088W NCB2Q92317 146 aa9.3□□□□□ -0.92
ABP1YCR088W OSM1P21375 501 aaKnown RBP9.29□□□□□ -0.92
ABP1YCR088W RSM25P40496 264 aa9.29□□□□□ -0.92
ABP1YCR088W YJR008WP47085 338 aa9.29□□□□□ -0.92
ABP1YCR088W SSL2Q00578 843 aa9.29□□□□□ -0.92
ABP1YCR088W MEC3Q02574 474 aa9.29□□□□□ -0.92
ABP1YCR088W APL2P36000 726 aaPredicted RBP9.29□□□□□ -0.92
ABP1YCR088W YGL242CP53066 181 aa9.29□□□□□ -0.92
ABP1YCR088W AIM44Q99299 758 aa9.29□□□□□ -0.92
ABP1YCR088W RPL19AP0CX82 189 aaKnown RBP9.28□□□□□ -0.92
ABP1YCR088W RPL19BP0CX83 189 aaPredicted RBP9.28□□□□□ -0.92
ABP1YCR088W PTP3P40048 928 aa9.28□□□□□ -0.92
ABP1YCR088W BRE1Q07457 700 aaKnown RBP9.28□□□□□ -0.92
ABP1YCR088W RSF2P46974 1380 aa9.28□□□□□ -0.92
ABP1YCR088W MIC60P36112 540 aa9.27□□□□□ -0.92
ABP1YCR088W FRS2P15625 503 aaKnown RBP9.27□□□□□ -0.93
ABP1YCR088W ENT3P47160 408 aa9.27□□□□□ -0.93
ABP1YCR088W CTF18P49956 741 aa9.27□□□□□ -0.93
ABP1YCR088W MLC1P53141 149 aa9.27□□□□□ -0.93
ABP1YCR088W PRX1P34227 261 aaKnown RBP9.26□□□□□ -0.93
ABP1YCR088W SSF1P38789 453 aaPredicted RBP9.25□□□□□ -0.93
ABP1YCR088W FRK1Q03002 865 aaPredicted RBP9.25□□□□□ -0.93
ABP1YCR088W KTR1P27810 393 aaKnown RBP9.24□□□□□ -0.93
ABP1YCR088W CCT5P40413 562 aaKnown RBP9.24□□□□□ -0.93
ABP1YCR088W FCP1Q03254 732 aa9.24□□□□□ -0.93
ABP1YCR088W YPR204WQ08995 1032 aa9.24□□□□□ -0.93
ABP1YCR088W PGA3Q12746 312 aaKnown RBP9.24□□□□□ -0.93
ABP1YCR088W SET1P38827 1080 aaKnown RBP9.24□□□□□ -0.93
ABP1YCR088W TRS33Q99394 268 aa9.24□□□□□ -0.93
ABP1YCR088W AI2P03876 854 aa9.23□□□□□ -0.93
ABP1YCR088W CPA2P03965 1118 aaKnown RBP9.23□□□□□ -0.93
ABP1YCR088W ELM1P32801 640 aa9.23□□□□□ -0.93
ABP1YCR088W MRPL10P36520 322 aa9.23□□□□□ -0.93
ABP1YCR088W VID28P40547 921 aa9.23□□□□□ -0.93
ABP1YCR088W TUM1Q08686 304 aaKnown RBP9.23□□□□□ -0.93
ABP1YCR088W NOP58Q12499 511 aaKnown RBP9.23□□□□□ -0.93
ABP1YCR088W SSK22P25390 1331 aaPredicted RBP9.23□□□□□ -0.93
ABP1YCR088W NPR3P38742 1146 aa9.22□□□□□ -0.93
ABP1YCR088W YBP2P53169 641 aa9.22□□□□□ -0.93
ABP1YCR088W RMT2Q03305 412 aa9.22□□□□□ -0.93
ABP1YCR088W UTP10P42945 1769 aaKnown RBP9.22□□□□□ -0.93
ABP1YCR088W RIM101P33400 625 aa9.22□□□□□ -0.93
ABP1YCR088W EPS1P40557 701 aa9.22□□□□□ -0.93
ABP1YCR088W DCD1P06773 312 aa9.21□□□□□ -0.94
ABP1YCR088W ARG8P18544 423 aa9.21□□□□□ -0.94
ABP1YCR088W STM1P39015 273 aaKnown RBP9.21□□□□□ -0.94
ABP1YCR088W PEX14P53112 341 aa9.21□□□□□ -0.94
ABP1YCR088W TIM50Q02776 476 aa9.21□□□□□ -0.94
ABP1YCR088W RDS1P25611 832 aa9.2□□□□□ -0.94
ABP1YCR088W CIC1P38779 376 aaKnown RBP9.2□□□□□ -0.94
ABP1YCR088W SPO22P40511 975 aa9.2□□□□□ -0.94
ABP1YCR088W NOP53Q12080 455 aaKnown RBP9.2□□□□□ -0.94
ABP1YCR088W CYC8P14922 966 aa9.19□□□□□ -0.94
ABP1YCR088W ATE1P16639 503 aa9.19□□□□□ -0.94
ABP1YCR088W MPE1P35728 441 aaKnown RBP9.19□□□□□ -0.94
ABP1YCR088W ATG13Q06628 738 aa9.19□□□□□ -0.94
ABP1YCR088W PSH1Q12161 406 aa9.19□□□□□ -0.94
ABP1YCR088W IES2P40154 320 aa9.19□□□□□ -0.94
ABP1YCR088W PKH1Q03407 766 aa9.19□□□□□ -0.94
ABP1YCR088W YLR271WQ06152 274 aa9.19□□□□□ -0.94
ABP1YCR088W ESC2Q06340 456 aa9.19□□□□□ -0.94
ABP1YCR088W SES1P07284 462 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms