RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	TAT1	P38085	619 aa		5.59	□□□□□ -1.51
CMD1	YBR109C	ATG32	P40458	529 aa		5.59	□□□□□ -1.51
CMD1	YBR109C	BIO2	P32451	375 aa		5.58	□□□□□ -1.52
CMD1	YBR109C	ARG8	P18544	423 aa		5.57	□□□□□ -1.52
CMD1	YBR109C	SLA1	P32790	1244 aa		5.57	□□□□□ -1.52
CMD1	YBR109C	MET1	P36150	593 aa		5.57	□□□□□ -1.52
CMD1	YBR109C	CSE4	P36012	229 aa		5.56	□□□□□ -1.52
CMD1	YBR109C	DLD3	P39976	496 aa	Known RBP	5.56	□□□□□ -1.52
CMD1	YBR109C	ALO1	P54783	526 aa	Known RBP	5.56	□□□□□ -1.52
CMD1	YBR109C	MSN5	P52918	1224 aa		5.55	□□□□□ -1.52
CMD1	YBR109C	ISU1	Q03020	165 aa		5.55	□□□□□ -1.52
CMD1	YBR109C	TIF1	P10081	395 aa	Known RBP	5.54	□□□□□ -1.52
CMD1	YBR109C	INP52	P50942	1183 aa		5.54	□□□□□ -1.52
CMD1	YBR109C	RPL34B	P40525	121 aa	Known RBP	5.53	□□□□□ -1.52
CMD1	YBR109C	TY1A-DR3	Q12441	440 aa		5.53	□□□□□ -1.52
CMD1	YBR109C	RPP2B	P02400	110 aa	Known RBP	5.52	□□□□□ -1.53
CMD1	YBR109C	MAK16	P10962	306 aa	Predicted RBP	5.52	□□□□□ -1.53
CMD1	YBR109C	OMA1	P36163	345 aa		5.52	□□□□□ -1.53
CMD1	YBR109C	SSN3	P39073	555 aa		5.52	□□□□□ -1.53
CMD1	YBR109C	YNL108C	P53929	270 aa		5.52	□□□□□ -1.53
CMD1	YBR109C	YPR084W	Q06821	456 aa		5.52	□□□□□ -1.53
CMD1	YBR109C	SUP45	P12385	437 aa	Known RBP	5.51	□□□□□ -1.53
CMD1	YBR109C	TEC1	P18412	486 aa		5.51	□□□□□ -1.53
CMD1	YBR109C	NAF1	P53919	492 aa	Known RBP	5.51	□□□□□ -1.53
CMD1	YBR109C	FPS1	P23900	669 aa		5.5	□□□□□ -1.53
CMD1	YBR109C	SPT5	P27692	1063 aa	Known RBP	5.5	□□□□□ -1.53
CMD1	YBR109C	YDJ1	P25491	409 aa	Known RBP	5.49	□□□□□ -1.53
CMD1	YBR109C	KNS1	P32350	737 aa	Predicted RBP	5.49	□□□□□ -1.53
CMD1	YBR109C	PRY1	P47032	299 aa		5.49	□□□□□ -1.53
CMD1	YBR109C	ENO2	P00925	437 aa	Known RBP	5.48	□□□□□ -1.53
CMD1	YBR109C	RTG2	P32608	588 aa	Known RBP	5.48	□□□□□ -1.53
CMD1	YBR109C	ATG20	Q07528	640 aa		5.48	□□□□□ -1.53
CMD1	YBR109C	PDC5	P16467	563 aa	Known RBP	5.47	□□□□□ -1.53
CMD1	YBR109C	AHP1	P38013	176 aa	Known RBP	5.47	□□□□□ -1.53
CMD1	YBR109C	SUB2	Q07478	446 aa	Known RBP	5.46	□□□□□ -1.54
CMD1	YBR109C	ENO1	P00924	437 aa	Known RBP	5.45	□□□□□ -1.54
CMD1	YBR109C	TTI1	P36097	1038 aa		5.45	□□□□□ -1.54
CMD1	YBR109C	AVT1	P47082	602 aa		5.45	□□□□□ -1.54
CMD1	YBR109C	RIM21	P48565	533 aa		5.45	□□□□□ -1.54
CMD1	YBR109C	SSA4	P22202	642 aa	Known RBP	5.44	□□□□□ -1.54
CMD1	YBR109C	CPS1	P27614	576 aa		5.44	□□□□□ -1.54
CMD1	YBR109C	MRX10	Q05648	414 aa		5.44	□□□□□ -1.54
CMD1	YBR109C	MCM16	Q12262	181 aa		5.43	□□□□□ -1.54
CMD1	YBR109C	WTM2	Q12206	467 aa		5.42	□□□□□ -1.54
CMD1	YBR109C	SSA1	P10591	642 aa	Known RBP	5.41	□□□□□ -1.54
CMD1	YBR109C	YPP1	P46951	817 aa		5.41	□□□□□ -1.54
CMD1	YBR109C	RDS2	P19541	446 aa	Known RBP	5.39	□□□□□ -1.55
CMD1	YBR109C	GUT2	P32191	649 aa		5.39	□□□□□ -1.55
CMD1	YBR109C	ISF1	P32488	338 aa		5.39	□□□□□ -1.55
CMD1	YBR109C	SIS2	P36024	562 aa		5.39	□□□□□ -1.55
CMD1	YBR109C	GEF1	P37020	779 aa		5.38	□□□□□ -1.55
CMD1	YBR109C	NOB1	Q08444	459 aa	Known RBP	5.38	□□□□□ -1.55
CMD1	YBR109C	PEP12	P32854	288 aa		5.37	□□□□□ -1.55
CMD1	YBR109C	TPS3	P38426	1054 aa	Known RBP	5.37	□□□□□ -1.55
CMD1	YBR109C	EMP47	P43555	445 aa		5.37	□□□□□ -1.55
CMD1	YBR109C	TY1A-DR2	Q03964	440 aa	Known RBP	5.37	□□□□□ -1.55
CMD1	YBR109C	AOS1	Q06624	347 aa		5.37	□□□□□ -1.55
CMD1	YBR109C	FRA1	Q07825	749 aa		5.37	□□□□□ -1.55
CMD1	YBR109C	PUP1	P25043	261 aa		5.36	□□□□□ -1.55
CMD1	YBR109C	MRPL16	P38064	232 aa		5.36	□□□□□ -1.55
CMD1	YBR109C	TGL4	P36165	910 aa		5.35	□□□□□ -1.55
CMD1	YBR109C	JJJ2	P46997	583 aa		5.35	□□□□□ -1.55
CMD1	YBR109C	STE20	Q03497	939 aa	Known RBP	5.35	□□□□□ -1.55
CMD1	YBR109C	YML083C	Q04526	418 aa		5.35	□□□□□ -1.55
CMD1	YBR109C	SPT2	P06843	333 aa	Predicted RBP	5.34	□□□□□ -1.55
CMD1	YBR109C	IRE1	P32361	1115 aa		5.34	□□□□□ -1.55
CMD1	YBR109C	MRX12	P47084	519 aa		5.34	□□□□□ -1.55
CMD1	YBR109C	APL6	P46682	809 aa		5.33	□□□□□ -1.56
CMD1	YBR109C	STB3	Q12427	513 aa		5.33	□□□□□ -1.56
CMD1	YBR109C	PGM1	P33401	570 aa	Known RBP	5.32	□□□□□ -1.56
CMD1	YBR109C	KTR7	P40504	517 aa		5.32	□□□□□ -1.56
CMD1	YBR109C	SPR3	P41901	512 aa		5.32	□□□□□ -1.56
CMD1	YBR109C	BUD9	P53226	547 aa		5.32	□□□□□ -1.56
CMD1	YBR109C	DAT1	P13483	248 aa	Known RBP	5.31	□□□□□ -1.56
CMD1	YBR109C	ELM1	P32801	640 aa		5.31	□□□□□ -1.56
CMD1	YBR109C	SHM1	P37292	490 aa	Predicted RBP	5.31	□□□□□ -1.56
CMD1	YBR109C	ATG3	P40344	310 aa		5.31	□□□□□ -1.56
CMD1	YBR109C	UTR2	P32623	467 aa		5.3	□□□□□ -1.56
CMD1	YBR109C	UTP7	P40055	554 aa	Known RBP	5.3	□□□□□ -1.56
CMD1	YBR109C	ALA1	P40825	983 aa	Known RBP	5.3	□□□□□ -1.56
CMD1	YBR109C	SUM1	P46676	1062 aa		5.3	□□□□□ -1.56
CMD1	YBR109C	RPL34A	P87262	121 aa	Predicted RBP	5.3	□□□□□ -1.56
CMD1	YBR109C	PSH1	Q12161	406 aa		5.3	□□□□□ -1.56
CMD1	YBR109C	PDC6	P26263	563 aa	Known RBP	5.29	□□□□□ -1.56
CMD1	YBR109C	SOH1	P38633	127 aa		5.29	□□□□□ -1.56
CMD1	YBR109C	ECM23	Q02710	187 aa		5.29	□□□□□ -1.56
CMD1	YBR109C	UTP13	Q05946	817 aa	Known RBP	5.29	□□□□□ -1.56
CMD1	YBR109C	GAL2	P13181	574 aa		5.28	□□□□□ -1.56
CMD1	YBR109C	TBS1	P38114	1094 aa		5.27	□□□□□ -1.57
CMD1	YBR109C	SLX8	P40072	274 aa		5.27	□□□□□ -1.57
CMD1	YBR109C	YML020W	Q03722	664 aa		5.27	□□□□□ -1.57
CMD1	YBR109C	NHA1	Q99271	985 aa		5.27	□□□□□ -1.57
CMD1	YBR109C	PHO87	P25360	923 aa		5.26	□□□□□ -1.57
CMD1	YBR109C	CDC3	P32457	520 aa	Known RBP	5.26	□□□□□ -1.57
CMD1	YBR109C	MSC7	P38694	644 aa		5.26	□□□□□ -1.57
CMD1	YBR109C	HAL5	P38970	855 aa	Known RBP	5.26	□□□□□ -1.57
CMD1	YBR109C	ISR1	Q06098	443 aa	Known RBP	5.26	□□□□□ -1.57
CMD1	YBR109C	AI3	P03877	415 aa		5.25	□□□□□ -1.57
CMD1	YBR109C	YKR073C	P36153	106 aa		5.25	□□□□□ -1.57
CMD1	YBR109C	MED7	Q08278	222 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms