RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	CDC73	Q06697	393 aa		7.71	□□□□□ -1.18
LDS1	YAL018C	EDE1	P34216	1381 aa		7.71	□□□□□ -1.18
LDS1	YAL018C	RRP5	Q05022	1729 aa	Known RBP	7.7	□□□□□ -1.18
LDS1	YAL018C	DOT5	P40553	215 aa		7.7	□□□□□ -1.18
LDS1	YAL018C	YNL050C	P53952	270 aa		7.7	□□□□□ -1.18
LDS1	YAL018C	YPR148C	Q06523	435 aa		7.7	□□□□□ -1.18
LDS1	YAL018C	GLN1	P32288	370 aa	Known RBP	7.69	□□□□□ -1.18
LDS1	YAL018C	NTH2	P35172	780 aa		7.69	□□□□□ -1.18
LDS1	YAL018C	MPP10	P47083	593 aa	Known RBP	7.69	□□□□□ -1.18
LDS1	YAL018C	YDR090C	Q03193	310 aa		7.69	□□□□□ -1.18
LDS1	YAL018C	LAM6	Q08001	693 aa		7.69	□□□□□ -1.18
LDS1	YAL018C	YRF1-4	O13559	1382 aa		7.69	□□□□□ -1.18
LDS1	YAL018C	YRF1-2	P40105	1681 aa		7.68	□□□□□ -1.18
LDS1	YAL018C	PRS1	P32895	427 aa	Known RBP	7.68	□□□□□ -1.18
LDS1	YAL018C	PTC2	P39966	464 aa	Known RBP	7.68	□□□□□ -1.18
LDS1	YAL018C	MAM1	P40065	302 aa		7.68	□□□□□ -1.18
LDS1	YAL018C	YJL181W	P46987	611 aa		7.68	□□□□□ -1.18
LDS1	YAL018C	YML082W	Q04533	649 aa	Known RBP	7.68	□□□□□ -1.18
LDS1	YAL018C	ATG13	Q06628	738 aa		7.68	□□□□□ -1.18
LDS1	YAL018C	INP54	Q08227	384 aa	Known RBP	7.68	□□□□□ -1.18
LDS1	YAL018C	UGA3	P26370	528 aa		7.67	□□□□□ -1.18
LDS1	YAL018C	ZDS1	P50111	915 aa	Known RBP	7.67	□□□□□ -1.18
LDS1	YAL018C	ADE16	P54113	591 aa	Known RBP	7.67	□□□□□ -1.18
LDS1	YAL018C	NSE3	Q05541	303 aa		7.67	□□□□□ -1.18
LDS1	YAL018C	THI22	Q06490	572 aa		7.67	□□□□□ -1.18
LDS1	YAL018C	OSM1	P21375	501 aa	Known RBP	7.66	□□□□□ -1.18
LDS1	YAL018C	UBP1	P25037	809 aa		7.66	□□□□□ -1.18
LDS1	YAL018C	KCC4	P25389	1037 aa		7.66	□□□□□ -1.18
LDS1	YAL018C	RAD54	P32863	898 aa		7.66	□□□□□ -1.18
LDS1	YAL018C	PRP40	P33203	583 aa	Known RBP	7.66	□□□□□ -1.18
LDS1	YAL018C	RGA1	P39083	1007 aa		7.66	□□□□□ -1.18
LDS1	YAL018C	FOX2	Q02207	900 aa	Known RBP	7.66	□□□□□ -1.18
LDS1	YAL018C	YPR015C	Q12531	247 aa		7.66	□□□□□ -1.18
LDS1	YAL018C	COB	P00163	385 aa		7.65	□□□□□ -1.18
LDS1	YAL018C	RAM1	P22007	431 aa		7.65	□□□□□ -1.18
LDS1	YAL018C	SAP155	P43612	1002 aa		7.65	□□□□□ -1.18
LDS1	YAL018C	FRK1	Q03002	865 aa	Predicted RBP	7.65	□□□□□ -1.18
LDS1	YAL018C	TY4B-H	P0C2J7	1802 aa		7.64	□□□□□ -1.19
LDS1	YAL018C	TY4B-J	P47024	1803 aa		7.64	□□□□□ -1.19
LDS1	YAL018C	GYP7	P48365	746 aa		7.64	□□□□□ -1.19
LDS1	YAL018C	ISU2	Q12056	156 aa		7.64	□□□□□ -1.19
LDS1	YAL018C	NUP145	P49687	1317 aa		7.63	□□□□□ -1.19
LDS1	YAL018C	SUI2	P20459	304 aa	Known RBP	7.63	□□□□□ -1.19
LDS1	YAL018C	GRX1	P25373	110 aa	Known RBP	7.63	□□□□□ -1.19
LDS1	YAL018C	TPD3	P31383	635 aa		7.63	□□□□□ -1.19
LDS1	YAL018C	RPN11	P43588	306 aa	Known RBP	7.63	□□□□□ -1.19
LDS1	YAL018C	YBP2	P53169	641 aa		7.63	□□□□□ -1.19
LDS1	YAL018C	YKR075C	P36155	307 aa		7.62	□□□□□ -1.19
LDS1	YAL018C	HEF3	P53978	1044 aa	Known RBP	7.62	□□□□□ -1.19
LDS1	YAL018C	RTT109	Q07794	436 aa		7.62	□□□□□ -1.19
LDS1	YAL018C	MAK21	Q12176	1025 aa	Known RBP	7.62	□□□□□ -1.19
LDS1	YAL018C	RVB2	Q12464	471 aa	Known RBP	7.62	□□□□□ -1.19
LDS1	YAL018C	RRT14	P40470	206 aa		7.61	□□□□□ -1.19
LDS1	YAL018C	MDG1	P53885	366 aa		7.6	□□□□□ -1.19
LDS1	YAL018C	RMT2	Q03305	412 aa		7.6	□□□□□ -1.19
LDS1	YAL018C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	not detected
LDS1	YAL018C	LYS2	P07702	1392 aa		7.59	□□□□□ -1.19
LDS1	YAL018C	PDR1	P12383	1068 aa		7.59	□□□□□ -1.19
LDS1	YAL018C	BMS1	Q08965	1183 aa	Known RBP	7.59	□□□□□ -1.19
LDS1	YAL018C	APC1	P53886	1748 aa		7.58	□□□□□ -1.2
LDS1	YAL018C	REF2	P42073	533 aa	Predicted RBP	7.58	□□□□□ -1.2
LDS1	YAL018C	NPR2	P39923	615 aa		7.57	□□□□□ -1.2
LDS1	YAL018C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.57	□□□□□ -1.2	not detected
LDS1	YAL018C	VPS70	P47161	811 aa		7.57	□□□□□ -1.2
LDS1	YAL018C	COQ4	O13525	335 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	RAD2	P07276	1031 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	RAD4	P14736	754 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	SRT1	Q03175	343 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	YOL057W	Q08225	711 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	ALE1	Q08548	619 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	SSP2	Q08646	371 aa		7.56	□□□□□ -1.2
LDS1	YAL018C	SNF2	P22082	1703 aa		7.55	□□□□□ -1.2
LDS1	YAL018C	GAP1	P19145	602 aa	Predicted RBP	7.55	□□□□□ -1.2
LDS1	YAL018C	ALD2	P47771	506 aa		7.55	□□□□□ -1.2
LDS1	YAL018C	PHM7	Q12252	991 aa		7.54	□□□□□ -1.2
LDS1	YAL018C	FKS3	Q04952	1785 aa		7.54	□□□□□ -1.2
LDS1	YAL018C	UGA2	P38067	497 aa		7.53	□□□□□ -1.2
LDS1	YAL018C	YBR287W	P38355	427 aa		7.53	□□□□□ -1.2
LDS1	YAL018C	DNM1	P54861	757 aa		7.53	□□□□□ -1.2
LDS1	YAL018C	TUM1	Q08686	304 aa	Known RBP	7.53	□□□□□ -1.2
LDS1	YAL018C	KIC1	P38692	1080 aa		7.52	□□□□□ -1.21
LDS1	YAL018C	LYS4	P49367	693 aa	Predicted RBP	7.52	□□□□□ -1.21
LDS1	YAL018C	UTP22	P53254	1237 aa	Predicted RBP	7.52	□□□□□ -1.21
LDS1	YAL018C	BUG1	Q12191	341 aa		7.52	□□□□□ -1.21
LDS1	YAL018C	URB1	P34241	1764 aa	Known RBP	7.51	□□□□□ -1.21
LDS1	YAL018C	ORC6	P38826	435 aa		7.51	□□□□□ -1.21
LDS1	YAL018C	FPR3	P38911	411 aa	Known RBP	7.51	□□□□□ -1.21
LDS1	YAL018C	YIL092W	P40497	633 aa		7.51	□□□□□ -1.21
LDS1	YAL018C	NOP8	Q08287	484 aa	Predicted RBP	7.51	□□□□□ -1.21
LDS1	YAL018C	YPP1	P46951	817 aa		7.5	□□□□□ -1.21
LDS1	YAL018C	ALD3	P54114	506 aa		7.5	□□□□□ -1.21
LDS1	YAL018C	YIL177C	P40434	1758 aa		7.5	□□□□□ -1.21
LDS1	YAL018C	YJL225C	P40889	1758 aa		7.5	□□□□□ -1.21
LDS1	YAL018C	RPP1B	P10622	106 aa	Known RBP	7.49	□□□□□ -1.21
LDS1	YAL018C	DAL5	P15365	543 aa		7.49	□□□□□ -1.21
LDS1	YAL018C	YBL086C	P38177	466 aa		7.49	□□□□□ -1.21
LDS1	YAL018C	CST6	P40535	587 aa		7.49	□□□□□ -1.21
LDS1	YAL018C	TEA1	P47988	759 aa		7.49	□□□□□ -1.21
LDS1	YAL018C	SRC1	Q03707	834 aa		7.49	□□□□□ -1.21
LDS1	YAL018C	SSA2	P10592	639 aa	Known RBP	7.48	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms