RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 TRPM2O94759 1503 aa25.79■■□□□ 1.72
PHGDH-227ENST00000641811 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
PHGDH-227ENST00000641811 NUTM2DQ5VT03 806 aaPredicted RBP25.78■■□□□ 1.72
PHGDH-227ENST00000641811 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
PHGDH-227ENST00000641811 SLC26A8Q96RN1 970 aa25.75■■□□□ 1.71
PHGDH-227ENST00000641811 BCANQ96GW7 911 aa25.74■■□□□ 1.71
PHGDH-227ENST00000641811 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
PHGDH-227ENST00000641811 ZNF326Q5BKZ1 582 aaKnown RBP25.71■■□□□ 1.71
PHGDH-227ENST00000641811 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
PHGDH-227ENST00000641811 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.71
PHGDH-227ENST00000641811 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.71
PHGDH-227ENST00000641811 STRCP1A6NGW2 1772 aa25.7■■□□□ 1.7
PHGDH-227ENST00000641811 CPS1P31327 1500 aa25.69■■□□□ 1.7
PHGDH-227ENST00000641811 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
PHGDH-227ENST00000641811 KIF1BO60333 1816 aa25.65■■□□□ 1.7
PHGDH-227ENST00000641811 HRCP23327 699 aa25.62■■□□□ 1.69
PHGDH-227ENST00000641811 CCDC144AA2RUR9 1427 aa25.62■■□□□ 1.69
PHGDH-227ENST00000641811 LRRC7Q96NW7 1537 aa25.61■■□□□ 1.69
PHGDH-227ENST00000641811 NEXMIFQ5QGS0 1516 aa25.6■■□□□ 1.69
PHGDH-227ENST00000641811 ADAMTS13Q76LX8 1427 aa25.6■■□□□ 1.69
PHGDH-227ENST00000641811 KCNA6P17658 529 aa25.59■■□□□ 1.69
PHGDH-227ENST00000641811 TBX22Q9Y458 520 aa25.59■■□□□ 1.69
PHGDH-227ENST00000641811 UBAP1LF5GYI3 381 aa25.58■■□□□ 1.69
PHGDH-227ENST00000641811 RGL3Q3MIN7 710 aa25.55■■□□□ 1.68
PHGDH-227ENST00000641811 NRXN3Q9Y4C0 1643 aa25.53■■□□□ 1.68
PHGDH-227ENST00000641811 RBM33Q96EV2 1170 aaKnown RBP25.53■■□□□ 1.68
PHGDH-227ENST00000641811 SPATA31E1Q6ZUB1 1445 aa25.53■■□□□ 1.68
PHGDH-227ENST00000641811 PROSER2Q86WR7 435 aaPredicted RBP25.52■■□□□ 1.68
PHGDH-227ENST00000641811 RPGRIP1LQ68CZ1 1315 aa25.52■■□□□ 1.68
PHGDH-227ENST00000641811 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
PHGDH-227ENST00000641811 NWD1Q149M9 1564 aa25.52■■□□□ 1.68
PHGDH-227ENST00000641811 SETBP1Q9Y6X0 1596 aa25.51■■□□□ 1.67
PHGDH-227ENST00000641811 CHD2O14647 1828 aaKnown RBP25.5■■□□□ 1.67
PHGDH-227ENST00000641811 VGFO15240 615 aaPredicted RBP25.5■■□□□ 1.67
PHGDH-227ENST00000641811 ANKRD30BQ9BXX2 1392 aa25.5■■□□□ 1.67
PHGDH-227ENST00000641811 TMEM94Q12767 1356 aa25.49■■□□□ 1.67
PHGDH-227ENST00000641811 XIRP1Q702N8 1843 aaKnown RBP25.49■■□□□ 1.67
PHGDH-227ENST00000641811 PPLO60437 1756 aa25.48■■□□□ 1.67
PHGDH-227ENST00000641811 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
PHGDH-227ENST00000641811 PTPRUQ92729 1446 aa25.46■■□□□ 1.67
PHGDH-227ENST00000641811 TOM1O60784 492 aa25.46■■□□□ 1.67
PHGDH-227ENST00000641811 PIP4K2BP78356 416 aa25.46■■□□□ 1.67
PHGDH-227ENST00000641811 METP08581 1390 aa25.45■■□□□ 1.67
PHGDH-227ENST00000641811 PIK3R4Q99570 1358 aa25.45■■□□□ 1.67
PHGDH-227ENST00000641811 ALKQ9UM73 1620 aa25.45■■□□□ 1.66
PHGDH-227ENST00000641811 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
PHGDH-227ENST00000641811 AMOTL2Q9Y2J4 779 aa25.44■■□□□ 1.66
PHGDH-227ENST00000641811 ADGRF5Q8IZF2 1346 aa25.43■■□□□ 1.66
PHGDH-227ENST00000641811 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
PHGDH-227ENST00000641811 IFT172Q9UG01 1749 aa25.4■■□□□ 1.66
PHGDH-227ENST00000641811 SETD1AO15047 1707 aaKnown RBP25.36■■□□□ 1.65
PHGDH-227ENST00000641811 XRN1Q8IZH2 1706 aaKnown RBP25.35■■□□□ 1.65
PHGDH-227ENST00000641811 C14orf37Q86TY3 774 aa25.33■■□□□ 1.65
PHGDH-227ENST00000641811 MSH6P52701 1360 aa25.32■■□□□ 1.64
PHGDH-227ENST00000641811 PIK3C2GO75747 1445 aa25.29■■□□□ 1.64
PHGDH-227ENST00000641811 NCOA3Q9Y6Q9 1424 aa25.29■■□□□ 1.64
PHGDH-227ENST00000641811 HSPA1LP34931 641 aa25.28■■□□□ 1.64
PHGDH-227ENST00000641811 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
PHGDH-227ENST00000641811 MYOM2P54296 1465 aa25.28■■□□□ 1.64
PHGDH-227ENST00000641811 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
PHGDH-227ENST00000641811 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
PHGDH-227ENST00000641811 DCAF11Q8TEB1 546 aa25.26■■□□□ 1.63
PHGDH-227ENST00000641811 C19orf44Q9H6X5 657 aa25.25■■□□□ 1.63
PHGDH-227ENST00000641811 DHX57Q6P158 1386 aaKnown RBP25.25■■□□□ 1.63
PHGDH-227ENST00000641811 ROBO2Q9HCK4 1378 aa25.25■■□□□ 1.63
PHGDH-227ENST00000641811 CFAP70Q5T0N1 1121 aa25.24■■□□□ 1.63
PHGDH-227ENST00000641811 STK26Q9P289 416 aa25.24■■□□□ 1.63
PHGDH-227ENST00000641811 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
PHGDH-227ENST00000641811 ASXL1Q8IXJ9 1541 aa25.23■■□□□ 1.63
PHGDH-227ENST00000641811 C14orf93Q9H972 538 aaKnown RBP25.23■■□□□ 1.63
PHGDH-227ENST00000641811 SLAIN2Q9P270 581 aa25.23■■□□□ 1.63
PHGDH-227ENST00000641811 PTCH1Q13635 1447 aa25.21■■□□□ 1.63
PHGDH-227ENST00000641811 ATF3P18847 181 aa25.2■■□□□ 1.62
PHGDH-227ENST00000641811 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.62
PHGDH-227ENST00000641811 CADPS2Q86UW7 1296 aa25.19■■□□□ 1.62
PHGDH-227ENST00000641811 SIN3AQ96ST3 1273 aa25.19■■□□□ 1.62
PHGDH-227ENST00000641811 PRAG1Q86YV5 1406 aa25.19■■□□□ 1.62
PHGDH-227ENST00000641811 LRPPRCP42704 1394 aaKnown RBP25.18■■□□□ 1.62
PHGDH-227ENST00000641811 ADGRL3Q9HAR2 1447 aa25.17■■□□□ 1.62
PHGDH-227ENST00000641811 ROBO1Q9Y6N7 1651 aa25.17■■□□□ 1.62
PHGDH-227ENST00000641811 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
PHGDH-227ENST00000641811 YTHDC2Q9H6S0 1430 aaKnown RBP25.15■■□□□ 1.62
PHGDH-227ENST00000641811 WAPLQ7Z5K2 1190 aa25.14■■□□□ 1.62
PHGDH-227ENST00000641811 LAMC1P11047 1609 aa25.14■■□□□ 1.61
PHGDH-227ENST00000641811 ABCC11Q96J66 1382 aa25.14■■□□□ 1.61
PHGDH-227ENST00000641811 TECPR2O15040 1411 aa25.13■■□□□ 1.61
PHGDH-227ENST00000641811 DCCP43146 1447 aa25.13■■□□□ 1.61
PHGDH-227ENST00000641811 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
PHGDH-227ENST00000641811 STAC3Q96MF2 364 aa25.13■■□□□ 1.61
PHGDH-227ENST00000641811 PLEKHH1Q9ULM0 1364 aa25.11■■□□□ 1.61
PHGDH-227ENST00000641811 MST1RQ04912 1400 aa25.09■■□□□ 1.61
PHGDH-227ENST00000641811 KNDC1Q76NI1 1749 aa25.09■■□□□ 1.61
PHGDH-227ENST00000641811 ADGRB1O14514 1584 aa25.08■■□□□ 1.61
PHGDH-227ENST00000641811 L3MBTL2Q969R5 705 aa25.07■■□□□ 1.6
PHGDH-227ENST00000641811 BRINP3Q76B58 766 aa25.06■■□□□ 1.6
PHGDH-227ENST00000641811 PCGF6Q9BYE7 350 aa25.06■■□□□ 1.6
PHGDH-227ENST00000641811 TRAK1Q9UPV9 953 aa25.04■■□□□ 1.6
PHGDH-227ENST00000641811 SIRT1Q96EB6 747 aa25.03■■□□□ 1.6
PHGDH-227ENST00000641811 SAFB2Q14151 953 aaKnown RBP eCLIP25.02■■□□□ 1.6
PHGDH-227ENST00000641811 PRAM1Q96QH2 718 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms