RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RGS17Q9UGC6 210 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-221ENST00000641573 CEP152O94986 1710 aa18.77■□□□□ 0.6
PHGDH-221ENST00000641573 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-221ENST00000641573 ABCC3O15438 1527 aa18.77■□□□□ 0.6
PHGDH-221ENST00000641573 LMTK2Q8IWU2 1503 aa18.77■□□□□ 0.6
PHGDH-221ENST00000641573 STRCP1A6NGW2 1772 aa18.77■□□□□ 0.6
PHGDH-221ENST00000641573 E9PCH4 1651 aa18.76■□□□□ 0.59
PHGDH-221ENST00000641573 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
PHGDH-221ENST00000641573 ARHGAP31Q2M1Z3 1444 aa18.74■□□□□ 0.59
PHGDH-221ENST00000641573 EFCAB6Q5THR3 1501 aa18.73■□□□□ 0.59
PHGDH-221ENST00000641573 TRPM2O94759 1503 aa18.69■□□□□ 0.58
PHGDH-221ENST00000641573 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
PHGDH-221ENST00000641573 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
PHGDH-221ENST00000641573 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
PHGDH-221ENST00000641573 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
PHGDH-221ENST00000641573 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
PHGDH-221ENST00000641573 NBPF8Q3BBV2 869 aa18.64■□□□□ 0.57
PHGDH-221ENST00000641573 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.57
PHGDH-221ENST00000641573 UBR1Q8IWV7 1749 aa18.63■□□□□ 0.57
PHGDH-221ENST00000641573 EID1Q9Y6B2 187 aa18.63■□□□□ 0.57
PHGDH-221ENST00000641573 CLTCL1P53675 1640 aa18.62■□□□□ 0.57
PHGDH-221ENST00000641573 XIRP1Q702N8 1843 aaKnown RBP18.61■□□□□ 0.57
PHGDH-221ENST00000641573 RGL3Q3MIN7 710 aa18.61■□□□□ 0.57
PHGDH-221ENST00000641573 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
PHGDH-221ENST00000641573 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
PHGDH-221ENST00000641573 SLIT1O75093 1534 aa18.59■□□□□ 0.57
PHGDH-221ENST00000641573 LTKP29376 864 aa18.59■□□□□ 0.57
PHGDH-221ENST00000641573 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
PHGDH-221ENST00000641573 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.57
PHGDH-221ENST00000641573 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
PHGDH-221ENST00000641573 SETD1AO15047 1707 aaKnown RBP18.58■□□□□ 0.57
PHGDH-221ENST00000641573 ROBO1Q9Y6N7 1651 aa18.58■□□□□ 0.57
PHGDH-221ENST00000641573 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
PHGDH-221ENST00000641573 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
PHGDH-221ENST00000641573 NOS1P29475 1434 aa18.57■□□□□ 0.56
PHGDH-221ENST00000641573 CFAP65Q6ZU64 1925 aaKnown RBP18.57■□□□□ 0.56
PHGDH-221ENST00000641573 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
PHGDH-221ENST00000641573 PROSER2Q86WR7 435 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-221ENST00000641573 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
PHGDH-221ENST00000641573 RALGAPBQ86X10 1494 aa18.52■□□□□ 0.55
PHGDH-221ENST00000641573 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
PHGDH-221ENST00000641573 KCNA6P17658 529 aa18.51■□□□□ 0.55
PHGDH-221ENST00000641573 JCADQ9P266 1359 aa18.51■□□□□ 0.55
PHGDH-221ENST00000641573 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
PHGDH-221ENST00000641573 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.557e-14■■■■■ 63.8
PHGDH-221ENST00000641573 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-221ENST00000641573 KIF1BO60333 1816 aa18.5■□□□□ 0.55
PHGDH-221ENST00000641573 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
PHGDH-221ENST00000641573 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
PHGDH-221ENST00000641573 MSH6P52701 1360 aa18.49■□□□□ 0.55
PHGDH-221ENST00000641573 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
PHGDH-221ENST00000641573 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
PHGDH-221ENST00000641573 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
PHGDH-221ENST00000641573 PIK3C2BO00750 1634 aa18.48■□□□□ 0.55
PHGDH-221ENST00000641573 CHGAP10645 457 aaKnown RBP18.47■□□□□ 0.55
PHGDH-221ENST00000641573 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
PHGDH-221ENST00000641573 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
PHGDH-221ENST00000641573 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
PHGDH-221ENST00000641573 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
PHGDH-221ENST00000641573 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
PHGDH-221ENST00000641573 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
PHGDH-221ENST00000641573 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-221ENST00000641573 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
PHGDH-221ENST00000641573 IDI1Q13907 227 aa18.44■□□□□ 0.54
PHGDH-221ENST00000641573 BCANQ96GW7 911 aa18.44■□□□□ 0.54
PHGDH-221ENST00000641573 CARD11Q9BXL7 1154 aa18.43■□□□□ 0.54
PHGDH-221ENST00000641573 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
PHGDH-221ENST00000641573 MYOM2P54296 1465 aa18.42■□□□□ 0.54
PHGDH-221ENST00000641573 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
PHGDH-221ENST00000641573 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
PHGDH-221ENST00000641573 RPGRIP1LQ68CZ1 1315 aa18.41■□□□□ 0.54
PHGDH-221ENST00000641573 USP47Q96K76 1375 aa18.41■□□□□ 0.54
PHGDH-221ENST00000641573 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
PHGDH-221ENST00000641573 GPRASP1Q5JY77 1395 aa18.4■□□□□ 0.54
PHGDH-221ENST00000641573 NBPF1Q3BBV0 1214 aa18.39■□□□□ 0.53
PHGDH-221ENST00000641573 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-221ENST00000641573 MYO5BQ9ULV0 1848 aa18.38■□□□□ 0.53
PHGDH-221ENST00000641573 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
PHGDH-221ENST00000641573 ADGRF5Q8IZF2 1346 aa18.37■□□□□ 0.53
PHGDH-221ENST00000641573 LRP6O75581 1613 aa18.37■□□□□ 0.53
PHGDH-221ENST00000641573 LAMC1P11047 1609 aa18.36■□□□□ 0.53
PHGDH-221ENST00000641573 RXRBP28702 533 aa18.36■□□□□ 0.53
PHGDH-221ENST00000641573 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
PHGDH-221ENST00000641573 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
PHGDH-221ENST00000641573 PPLO60437 1756 aa18.35■□□□□ 0.53
PHGDH-221ENST00000641573 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
PHGDH-221ENST00000641573 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
PHGDH-221ENST00000641573 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
PHGDH-221ENST00000641573 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
PHGDH-221ENST00000641573 WASHC2AQ641Q2 1341 aa18.31■□□□□ 0.52
PHGDH-221ENST00000641573 VGFO15240 615 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-221ENST00000641573 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-221ENST00000641573 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
PHGDH-221ENST00000641573 ST20-MTHFSA0A0A6YYL1 179 aa18.3■□□□□ 0.52
PHGDH-221ENST00000641573 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-221ENST00000641573 CFAP70Q5T0N1 1121 aa18.3■□□□□ 0.52
PHGDH-221ENST00000641573 HDGFP51858 240 aaKnown RBP18.29■□□□□ 0.52
PHGDH-221ENST00000641573 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
PHGDH-221ENST00000641573 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-221ENST00000641573 PIK3C2GO75747 1445 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms