RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 GCC2Q8IWJ2 1684 aa22.56■■□□□ 1.2
SRRT-219ENST00000641476 IDI1Q13907 227 aa22.56■■□□□ 1.2
SRRT-219ENST00000641476 SETD1AO15047 1707 aaKnown RBP22.55■■□□□ 1.2
SRRT-219ENST00000641476 BCANQ96GW7 911 aa22.55■■□□□ 1.2
SRRT-219ENST00000641476 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
SRRT-219ENST00000641476 MSH6P52701 1360 aa22.54■■□□□ 1.2
SRRT-219ENST00000641476 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
SRRT-219ENST00000641476 JCADQ9P266 1359 aa22.52■■□□□ 1.2
SRRT-219ENST00000641476 ROCK1Q13464 1354 aa22.51■■□□□ 1.19
SRRT-219ENST00000641476 SLAIN2Q9P270 581 aa22.51■■□□□ 1.19
SRRT-219ENST00000641476 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
SRRT-219ENST00000641476 IQGAP3Q86VI3 1631 aa22.49■■□□□ 1.19
SRRT-219ENST00000641476 E9PCH4 1651 aa22.48■■□□□ 1.19
SRRT-219ENST00000641476 PHLPP1O60346 1717 aa22.47■■□□□ 1.19
SRRT-219ENST00000641476 MYO5BQ9ULV0 1848 aa22.46■■□□□ 1.19
SRRT-219ENST00000641476 MEX3CQ5U5Q3 659 aaKnown RBP22.44■■□□□ 1.18
SRRT-219ENST00000641476 LRP6O75581 1613 aa22.42■■□□□ 1.18
SRRT-219ENST00000641476 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
SRRT-219ENST00000641476 TRIM52Q96A61 297 aa22.42■■□□□ 1.18
SRRT-219ENST00000641476 SLC52A1Q9NWF4 448 aa22.42■■□□□ 1.18
SRRT-219ENST00000641476 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
SRRT-219ENST00000641476 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
SRRT-219ENST00000641476 COL16A1Q07092 1604 aaPredicted RBP22.41■■□□□ 1.18
SRRT-219ENST00000641476 ZNF772Q68DY9 489 aaPredicted RBP22.4■■□□□ 1.18
SRRT-219ENST00000641476 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
SRRT-219ENST00000641476 UPF1Q92900 1129 aaKnown RBP eCLIP22.4■■□□□ 1.18
SRRT-219ENST00000641476 SPATA31A6Q5VVP1 1343 aa22.39■■□□□ 1.18
SRRT-219ENST00000641476 ZFYVE9O95405 1425 aa22.39■■□□□ 1.17
SRRT-219ENST00000641476 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
SRRT-219ENST00000641476 ITGAEP38570 1179 aa22.38■■□□□ 1.17
SRRT-219ENST00000641476 RRBP1Q9P2E9 1410 aaKnown RBP22.37■■□□□ 1.17
SRRT-219ENST00000641476 RIMS2Q9UQ26 1411 aa22.36■■□□□ 1.17
SRRT-219ENST00000641476 NUP155O75694 1391 aa22.33■■□□□ 1.17
SRRT-219ENST00000641476 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
SRRT-219ENST00000641476 HDGFP51858 240 aaKnown RBP22.32■■□□□ 1.16
SRRT-219ENST00000641476 ATF3P18847 181 aa22.31■■□□□ 1.16
SRRT-219ENST00000641476 CADPS2Q86UW7 1296 aa22.31■■□□□ 1.16
SRRT-219ENST00000641476 NCOA3Q9Y6Q9 1424 aa22.31■■□□□ 1.16
SRRT-219ENST00000641476 CHD2O14647 1828 aaKnown RBP22.3■■□□□ 1.16
SRRT-219ENST00000641476 RXRBP28702 533 aa22.3■■□□□ 1.16
SRRT-219ENST00000641476 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
SRRT-219ENST00000641476 AHDC1Q5TGY3 1603 aaPredicted RBP22.29■■□□□ 1.16
SRRT-219ENST00000641476 NUTM2BA6NNL0 878 aaPredicted RBP22.29■■□□□ 1.16
SRRT-219ENST00000641476 NUTM2EB1AL46 878 aaPredicted RBP22.29■■□□□ 1.16
SRRT-219ENST00000641476 CHGAP10645 457 aaKnown RBP22.29■■□□□ 1.16
SRRT-219ENST00000641476 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
SRRT-219ENST00000641476 NUTM2AQ8IVF1 878 aaPredicted RBP22.29■■□□□ 1.16
SRRT-219ENST00000641476 C19orf44Q9H6X5 657 aa22.28■■□□□ 1.16
SRRT-219ENST00000641476 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
SRRT-219ENST00000641476 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
SRRT-219ENST00000641476 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
SRRT-219ENST00000641476 ADAMTS13Q76LX8 1427 aa22.25■■□□□ 1.15
SRRT-219ENST00000641476 NAIPQ13075 1403 aa22.24■■□□□ 1.15
SRRT-219ENST00000641476 BRINP3Q76B58 766 aa22.24■■□□□ 1.15
SRRT-219ENST00000641476 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.23■■□□□ 1.15
SRRT-219ENST00000641476 AFF2P51816 1311 aa22.22■■□□□ 1.15
SRRT-219ENST00000641476 CDK12Q9NYV4 1490 aaPredicted RBP22.21■■□□□ 1.15
SRRT-219ENST00000641476 CLTCL1P53675 1640 aa22.2■■□□□ 1.15
SRRT-219ENST00000641476 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
SRRT-219ENST00000641476 TRPM2O94759 1503 aa22.2■■□□□ 1.14
SRRT-219ENST00000641476 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
SRRT-219ENST00000641476 NRXN3Q9Y4C0 1643 aa22.18■■□□□ 1.14
SRRT-219ENST00000641476 HFM1A2PYH4 1435 aa22.17■■□□□ 1.14
SRRT-219ENST00000641476 ASXL1Q8IXJ9 1541 aa22.16■■□□□ 1.14
SRRT-219ENST00000641476 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
SRRT-219ENST00000641476 C8orf37Q96NL8 207 aa22.15■■□□□ 1.14
SRRT-219ENST00000641476 SETBP1Q9Y6X0 1596 aa22.15■■□□□ 1.14
SRRT-219ENST00000641476 RGS12O14924 1447 aa22.14■■□□□ 1.14
SRRT-219ENST00000641476 DCCP43146 1447 aa22.14■■□□□ 1.13
SRRT-219ENST00000641476 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.13
SRRT-219ENST00000641476 XRN1Q8IZH2 1706 aaKnown RBP22.11■■□□□ 1.13
SRRT-219ENST00000641476 NEXMIFQ5QGS0 1516 aa22.11■■□□□ 1.13
SRRT-219ENST00000641476 KIF1BO60333 1816 aa22.11■■□□□ 1.13
SRRT-219ENST00000641476 QTRT2Q9H974 415 aaKnown RBP22.11■■□□□ 1.13
SRRT-219ENST00000641476 MST1RQ04912 1400 aa22.11■■□□□ 1.13
SRRT-219ENST00000641476 SRCAPQ6ZRS2 3230 aa22.11■■□□□ 1.13
SRRT-219ENST00000641476 RBM6P78332 1123 aaKnown RBP22.1■■□□□ 1.13
SRRT-219ENST00000641476 LRRC59Q96AG4 307 aaKnown RBP22.1■■□□□ 1.13
SRRT-219ENST00000641476 DDX17Q92841 729 aaKnown RBP22.09■■□□□ 1.13
SRRT-219ENST00000641476 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
SRRT-219ENST00000641476 NHSL1Q5SYE7 1610 aa22.06■■□□□ 1.12
SRRT-219ENST00000641476 ADAMTS2O95450 1211 aa22.04■■□□□ 1.12
SRRT-219ENST00000641476 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
SRRT-219ENST00000641476 NGLY1Q96IV0 654 aa22.03■■□□□ 1.12
SRRT-219ENST00000641476 METP08581 1390 aa22.02■■□□□ 1.12
SRRT-219ENST00000641476 ADGRL3Q9HAR2 1447 aa22.01■■□□□ 1.11
SRRT-219ENST00000641476 ATAD2Q6PL18 1390 aa22■■□□□ 1.11
SRRT-219ENST00000641476 PPLO60437 1756 aa21.98■■□□□ 1.11
SRRT-219ENST00000641476 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
SRRT-219ENST00000641476 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
SRRT-219ENST00000641476 USP21Q9UK80 565 aa21.96■■□□□ 1.11
SRRT-219ENST00000641476 C1orf167Q5SNV9 1468 aa21.94■■□□□ 1.1
SRRT-219ENST00000641476 ZRANB1Q9UGI0 708 aa21.93■■□□□ 1.1
SRRT-219ENST00000641476 TRPC5Q9UL62 973 aaPredicted RBP21.93■■□□□ 1.1
SRRT-219ENST00000641476 FOXD1Q16676 465 aa21.91■■□□□ 1.1
SRRT-219ENST00000641476 ORAI2Q96SN7 254 aa21.9■■□□□ 1.1
SRRT-219ENST00000641476 PTCH1Q13635 1447 aa21.89■■□□□ 1.1
SRRT-219ENST00000641476 IFT172Q9UG01 1749 aa21.89■■□□□ 1.1
SRRT-219ENST00000641476 SOS2Q07890 1332 aaPredicted RBP21.89■■□□□ 1.1
SRRT-219ENST00000641476 FNBP4Q8N3X1 1017 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms